RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 LINC00469Q8N7U9 141 aa13.88□□□□□ -0.19
COL27A1-208ENST00000494780 HERVK_113P63121 156 aa13.87□□□□□ -0.19
COL27A1-208ENST00000494780 PAPPA-AS1Q5QFB9 102 aa13.87□□□□□ -0.19
COL27A1-208ENST00000494780 NXT2Q9NPJ8 142 aaKnown RBP13.86□□□□□ -0.19
COL27A1-208ENST00000494780 XAGE1AQ9HD64 81 aa13.85□□□□□ -0.19
COL27A1-208ENST00000494780 F8VRH5 84 aa13.84□□□□□ -0.19
COL27A1-208ENST00000494780 G0S2P27469 103 aa13.84□□□□□ -0.19
COL27A1-208ENST00000494780 PRR4Q16378 134 aa13.84□□□□□ -0.19
COL27A1-208ENST00000494780 CDKN2A-AS1Q9UH64 79 aa13.84□□□□□ -0.19
COL27A1-208ENST00000494780 TIMM17AQ99595 171 aa13.83□□□□□ -0.2
COL27A1-208ENST00000494780 GEMIN7Q9H840 131 aaKnown RBP13.83□□□□□ -0.2
COL27A1-208ENST00000494780 TP73-AS1Q9UF72 201 aa13.83□□□□□ -0.2
COL27A1-208ENST00000494780 CXCL5P42830 114 aa13.82□□□□□ -0.2
COL27A1-208ENST00000494780 CTDSP1Q9GZU7 261 aa13.82□□□□□ -0.2
COL27A1-208ENST00000494780 MRPL55Q7Z7F7 128 aaKnown RBP13.8□□□□□ -0.2
COL27A1-208ENST00000494780 TOMM6Q96B49 74 aa13.8□□□□□ -0.2
COL27A1-208ENST00000494780 RPL28P46779 137 aaKnown RBP13.78□□□□□ -0.2
COL27A1-208ENST00000494780 BCE1O60756 84 aa13.76□□□□□ -0.21
COL27A1-208ENST00000494780 ERASQ7Z444 233 aa13.76□□□□□ -0.21
COL27A1-208ENST00000494780 SMIM1B2RUZ4 78 aa13.75□□□□□ -0.21
COL27A1-208ENST00000494780 PDZD11Q5EBL8 140 aa13.74□□□□□ -0.21
COL27A1-208ENST00000494780 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
COL27A1-208ENST00000494780 TINCRA0A1B0GVN0 87 aa13.73□□□□□ -0.21
COL27A1-208ENST00000494780 RAB14P61106 215 aa13.73□□□□□ -0.21
COL27A1-208ENST00000494780 COX7B2Q8TF08 81 aa13.73□□□□□ -0.21
COL27A1-208ENST00000494780 LINC00167Q96N53 147 aa13.73□□□□□ -0.21
COL27A1-208ENST00000494780 IGLV5-45A0A087WSX0 123 aa13.72□□□□□ -0.21
COL27A1-208ENST00000494780 A0A087X002 238 aa13.72□□□□□ -0.21
COL27A1-208ENST00000494780 TSPAN13O95857 204 aa13.72□□□□□ -0.21
COL27A1-208ENST00000494780 KIAA1644Q3SXP7 199 aa13.72□□□□□ -0.21
COL27A1-208ENST00000494780 CRYGAP11844 174 aa13.71□□□□□ -0.21
COL27A1-208ENST00000494780 LINC01549A6NIU2 74 aa13.7□□□□□ -0.22
COL27A1-208ENST00000494780 RPL37AP8A6NKH3 93 aa13.69□□□□□ -0.22
COL27A1-208ENST00000494780 ADCYAP1P18509 176 aa13.69□□□□□ -0.22
COL27A1-208ENST00000494780 TYMSOSQ8TAI1 123 aa13.69□□□□□ -0.22
COL27A1-208ENST00000494780 IGLV5-37A0A075B6J1 123 aa13.68□□□□□ -0.22
COL27A1-208ENST00000494780 TRAV9-1A0A075B6T8 112 aa13.66□□□□□ -0.22
COL27A1-208ENST00000494780 GAGE10A6NGK3 116 aa13.66□□□□□ -0.22
COL27A1-208ENST00000494780 LINC01546A6NGU7 62 aa13.66□□□□□ -0.22
COL27A1-208ENST00000494780 CST9LQ9H4G1 147 aa13.66□□□□□ -0.22
COL27A1-208ENST00000494780 SPINK8P0C7L1 97 aa13.64□□□□□ -0.23
COL27A1-208ENST00000494780 RAB5BP61020 215 aa13.64□□□□□ -0.23
COL27A1-208ENST00000494780 KRTAP13-1Q8IUC0 172 aa13.64□□□□□ -0.23
COL27A1-208ENST00000494780 NKAPP1Q8N9T2 125 aa13.64□□□□□ -0.23
COL27A1-208ENST00000494780 A0A0U1RQV1 116 aa13.63□□□□□ -0.23
COL27A1-208ENST00000494780 MRPL18Q9H0U6 180 aaKnown RBP13.63□□□□□ -0.23
COL27A1-208ENST00000494780 MUC2Q02817 5179 aa13.63□□□□□ -0.23
COL27A1-208ENST00000494780 UBE2AP49459 152 aa13.62□□□□□ -0.23
COL27A1-208ENST00000494780 PMVKQ15126 192 aa13.62□□□□□ -0.23
COL27A1-208ENST00000494780 GNB1LQ9BYB4 327 aa13.62□□□□□ -0.23
COL27A1-208ENST00000494780 ANAPC11Q9NYG5 84 aa13.61□□□□□ -0.23
COL27A1-208ENST00000494780 H3BRM9 83 aa13.6□□□□□ -0.23
COL27A1-208ENST00000494780 ATP5LO75964 103 aa13.6□□□□□ -0.23
COL27A1-208ENST00000494780 CLLU1Q5K131 121 aa13.6□□□□□ -0.23
COL27A1-208ENST00000494780 FAM229BQ4G0N7 80 aa13.59□□□□□ -0.23
COL27A1-208ENST00000494780 KRTAP13-2Q52LG2 175 aa13.59□□□□□ -0.23
COL27A1-208ENST00000494780 S100PP25815 95 aa13.57□□□□□ -0.24
COL27A1-208ENST00000494780 UQCC3Q6UW78 93 aa13.57□□□□□ -0.24
COL27A1-208ENST00000494780 FA2HQ7L5A8 372 aa13.57□□□□□ -0.24
COL27A1-208ENST00000494780 IGKV2-28A0A075B6P5 120 aa13.56□□□□□ -0.24
COL27A1-208ENST00000494780 TMEM218A2RU14 115 aa13.56□□□□□ -0.24
COL27A1-208ENST00000494780 IGKV2D-28P01615 120 aa13.56□□□□□ -0.24
COL27A1-208ENST00000494780 COX19Q49B96 90 aa13.56□□□□□ -0.24
COL27A1-208ENST00000494780 SMCO4Q9NRQ5 59 aa13.56□□□□□ -0.24
COL27A1-208ENST00000494780 IGLV5-39A0A0G2JS06 123 aa13.54□□□□□ -0.24
COL27A1-208ENST00000494780 SCO1O75880 301 aa13.54□□□□□ -0.24
COL27A1-208ENST00000494780 PFN2P35080 140 aa13.54□□□□□ -0.24
COL27A1-208ENST00000494780 LINC00304Q8N9R0 145 aa13.54□□□□□ -0.24
COL27A1-208ENST00000494780 IGLC3P0DOY3 106 aa13.53□□□□□ -0.24
COL27A1-208ENST00000494780 VPREB1P12018 145 aa13.51□□□□□ -0.25
COL27A1-208ENST00000494780 IGKV2D-26A0A0A0MRZ7 120 aa13.5□□□□□ -0.25
COL27A1-208ENST00000494780 PRLHP81277 87 aa13.5□□□□□ -0.25
COL27A1-208ENST00000494780 FABP9Q0Z7S8 132 aa13.5□□□□□ -0.25
COL27A1-208ENST00000494780 SEC11CQ9BY50 192 aa13.5□□□□□ -0.25
COL27A1-208ENST00000494780 SND1-IT1Q9HBX3 110 aa13.5□□□□□ -0.25
COL27A1-208ENST00000494780 ERG28Q9UKR5 140 aa13.5□□□□□ -0.25
COL27A1-208ENST00000494780 RPL24P83731 157 aaKnown RBP13.49□□□□□ -0.25
COL27A1-208ENST00000494780 COX17Q14061 63 aa13.49□□□□□ -0.25
COL27A1-208ENST00000494780 FAM19A1Q7Z5A9 133 aa13.49□□□□□ -0.25
COL27A1-208ENST00000494780 RETNLBQ9BQ08 111 aa13.49□□□□□ -0.25
COL27A1-208ENST00000494780 TMEM126AQ9H061 195 aa13.49□□□□□ -0.25
COL27A1-208ENST00000494780 ZNF22P17026 224 aaPredicted RBP13.48□□□□□ -0.25
COL27A1-208ENST00000494780 NDUFA6P56556 154 aa13.48□□□□□ -0.25
COL27A1-208ENST00000494780 CTAG1AP78358 180 aa13.48□□□□□ -0.25
COL27A1-208ENST00000494780 TMEM238C9JI98 176 aa13.47□□□□□ -0.25
COL27A1-208ENST00000494780 A0A096LNJ9 63 aa13.46□□□□□ -0.25
COL27A1-208ENST00000494780 M0R378 163 aa13.44□□□□□ -0.26
COL27A1-208ENST00000494780 TPRXLQ17RH7 258 aa13.43□□□□□ -0.26
COL27A1-208ENST00000494780 SFTA2Q6UW10 78 aa13.43□□□□□ -0.26
COL27A1-208ENST00000494780 ZNF625Q96I27 306 aaPredicted RBP13.43□□□□□ -0.26
COL27A1-208ENST00000494780 PLEKHB2Q96CS7 222 aa13.42□□□□□ -0.26
COL27A1-208ENST00000494780 HBDP02042 147 aa13.41□□□□□ -0.26
COL27A1-208ENST00000494780 LINC00614P0C842 121 aa13.41□□□□□ -0.26
COL27A1-208ENST00000494780 CBLN2Q8IUK8 224 aa13.41□□□□□ -0.26
COL27A1-208ENST00000494780 Q8NDZ9 215 aa13.41□□□□□ -0.26
COL27A1-208ENST00000494780 URB1-AS1Q96HZ7 61 aa13.41□□□□□ -0.26
COL27A1-208ENST00000494780 CDIP1Q9H305 208 aa13.41□□□□□ -0.26
COL27A1-208ENST00000494780 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
COL27A1-208ENST00000494780 C11orf86A6NJI1 115 aa13.39□□□□□ -0.27
COL27A1-208ENST00000494780 C18orf32Q8TCD1 76 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms