RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 LOC107984156A0A0G2JMH3 177 aa4.56□□□□□ -1.68
MSH5-217ENST00000494458 ADAMTSL4-AS1Q5T5F5 129 aa4.56□□□□□ -1.68
MSH5-217ENST00000494458 ARL17AQ8IVW1 177 aa4.56□□□□□ -1.68
MSH5-217ENST00000494458 COX7B2Q8TF08 81 aa4.56□□□□□ -1.68
MSH5-217ENST00000494458 HIST1H4GQ99525 98 aa4.56□□□□□ -1.68
MSH5-217ENST00000494458 CSMD3Q7Z407 3707 aa4.56□□□□□ -1.68
MSH5-217ENST00000494458 A6NDN8 102 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 TMEM238C9JI98 176 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 IFITM1P13164 125 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 C5orf38Q86SI9 138 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 Q9H8V8 135 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 KLK12Q9UKR0 248 aa4.55□□□□□ -1.68
MSH5-217ENST00000494458 VPS13DQ5THJ4 4388 aa4.54□□□□□ -1.68
MSH5-217ENST00000494458 COX7A2LO14548 114 aa4.54□□□□□ -1.68
MSH5-217ENST00000494458 EIF4EBP3O60516 100 aaPredicted RBP4.54□□□□□ -1.68
MSH5-217ENST00000494458 GCSHP23434 173 aa4.54□□□□□ -1.68
MSH5-217ENST00000494458 XCL1P47992 114 aa4.54□□□□□ -1.68
MSH5-217ENST00000494458 CCL18P55774 89 aa4.54□□□□□ -1.68
MSH5-217ENST00000494458 COX11Q9Y6N1 276 aa4.54□□□□□ -1.68
MSH5-217ENST00000494458 GVQW2A0A096LPI5 108 aaPredicted RBP4.53□□□□□ -1.68
MSH5-217ENST00000494458 IGKV3OR2-268A0A0C4DH90 116 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 A0A1B0GV90 55 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 GAGE12HA6NDE8 117 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 C9orf118A6NHY6 69 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 IGLL5B9A064 214 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 F8WDY8 70 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 CFC1BP0CG36 223 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 CFC1P0CG37 223 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 SMIM13P0DJ93 91 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 CXCL5P42830 114 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 SRSF9Q13242 221 aaKnown RBP eCLIP4.53□□□□□ -1.68
MSH5-217ENST00000494458 BATFQ16520 125 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 MUSTN1Q8IVN3 82 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 MUC7Q8TAX7 377 aa4.53□□□□□ -1.68
MSH5-217ENST00000494458 PLECQ15149 4684 aaKnown RBP4.53□□□□□ -1.68
MSH5-217ENST00000494458 IGLV10-54A0A075B6I4 117 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 A0A0B4J2C4 111 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 TMEM238LA0A1B0GVL6 79 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 NUPR2A6NF83 97 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 A6NJY4 79 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 RPL24P83731 157 aaKnown RBP4.52□□□□□ -1.69
MSH5-217ENST00000494458 CIRBPQ14011 172 aaKnown RBP4.52□□□□□ -1.69
MSH5-217ENST00000494458 COX17Q14061 63 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 C6orf226Q5I0X4 101 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 CLPSL2Q6UWE3 100 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 UBE2WQ96B02 151 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 FBN3Q75N90 2809 aa4.52□□□□□ -1.69
MSH5-217ENST00000494458 A4D1N5 150 aa4.51□□□□□ -1.69
MSH5-217ENST00000494458 APOMO95445 188 aa4.51□□□□□ -1.69
MSH5-217ENST00000494458 CRPP02741 224 aa4.51□□□□□ -1.69
MSH5-217ENST00000494458 PRSS2P07478 247 aa4.51□□□□□ -1.69
MSH5-217ENST00000494458 SOSTDC1Q6X4U4 206 aa4.51□□□□□ -1.69
MSH5-217ENST00000494458 LINC00308Q8TCZ7 52 aa4.51□□□□□ -1.69
MSH5-217ENST00000494458 NTN5Q8WTR8 489 aaPredicted RBP4.51□□□□□ -1.69
MSH5-217ENST00000494458 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
MSH5-217ENST00000494458 MEIG1Q5JSS6 88 aa4.5□□□□□ -1.69
MSH5-217ENST00000494458 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
MSH5-217ENST00000494458 C15orf56Q8N910 161 aa4.5□□□□□ -1.69
MSH5-217ENST00000494458 COPS9Q8WXC6 57 aa4.5□□□□□ -1.69
MSH5-217ENST00000494458 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
MSH5-217ENST00000494458 NHP2Q9NX24 153 aaKnown RBP4.5□□□□□ -1.69
MSH5-217ENST00000494458 ERG28Q9UKR5 140 aa4.5□□□□□ -1.69
MSH5-217ENST00000494458 MALP21145 153 aa4.49□□□□□ -1.69
MSH5-217ENST00000494458 C1orf43Q9BWL3 253 aa4.49□□□□□ -1.69
MSH5-217ENST00000494458 PRO1854Q9UHT4 67 aa4.49□□□□□ -1.69
MSH5-217ENST00000494458 STARD9Q9P2P6 4700 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 TRBV30A0A0K0K1B3 111 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 A0A1W2PPM0 123 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 KRTAP9-7A8MTY7 169 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 K7ERJ3 54 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 RNF151Q2KHN1 245 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 C10orf25Q5T742 122 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 C2orf82Q6UX34 121 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 KRTAP1-5Q9BYS1 174 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 TOMM7Q9P0U1 55 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 DNAH6Q9C0G6 4158 aa4.48□□□□□ -1.69
MSH5-217ENST00000494458 LYSTQ99698 3801 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 H3BUT2 72 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 NDUFC2O95298 119 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 TSPAN13O95857 204 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 CKS1BP61024 79 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 SPAG11BQ08648 103 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 UBE2V1Q13404 147 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 UNQ6190/PRO20217Q6UXQ8 127 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 C6orf223Q8N319 242 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 DAND5Q8N907 189 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 RMI2Q96E14 147 aa4.47□□□□□ -1.69
MSH5-217ENST00000494458 IGKV2-28A0A075B6P5 120 aa4.46□□□□□ -1.7
MSH5-217ENST00000494458 IGKV2D-28P01615 120 aa4.46□□□□□ -1.7
MSH5-217ENST00000494458 TLX1NBP0CAT3 122 aa4.46□□□□□ -1.7
MSH5-217ENST00000494458 RAB37Q96AX2 223 aa4.46□□□□□ -1.7
MSH5-217ENST00000494458 C6orf48Q9UBA6 75 aa4.46□□□□□ -1.7
MSH5-217ENST00000494458 TENM2Q9NT68 2774 aa4.45□□□□□ -1.7
MSH5-217ENST00000494458 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms