RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 RPL13AP40429 203 aaKnown RBP7.55□□□□□ -1.2
COL6A1-205ENST00000492851 C9orf129Q5T035 196 aaKnown RBP7.55□□□□□ -1.2
COL6A1-205ENST00000492851 UQCC3Q6UW78 93 aa7.55□□□□□ -1.2
COL6A1-205ENST00000492851 ERASQ7Z444 233 aa7.55□□□□□ -1.2
COL6A1-205ENST00000492851 TOMM6Q96B49 74 aa7.55□□□□□ -1.2
COL6A1-205ENST00000492851 ZC2HC1BQ5TFG8 222 aa7.54□□□□□ -1.2
COL6A1-205ENST00000492851 KRTAP7-1Q8IUC3 87 aa7.54□□□□□ -1.2
COL6A1-205ENST00000492851 PRR26Q8N8Z3 221 aa7.54□□□□□ -1.2
COL6A1-205ENST00000492851 SCGB3A1Q96QR1 104 aa7.54□□□□□ -1.2
COL6A1-205ENST00000492851 CDKN2A-AS1Q9UH64 79 aa7.54□□□□□ -1.2
COL6A1-205ENST00000492851 CARHSP1Q9Y2V2 147 aaKnown RBP7.54□□□□□ -1.2
COL6A1-205ENST00000492851 ZNF861PO60384 105 aa7.53□□□□□ -1.2
COL6A1-205ENST00000492851 S100PP25815 95 aa7.53□□□□□ -1.2
COL6A1-205ENST00000492851 COX19Q49B96 90 aa7.53□□□□□ -1.2
COL6A1-205ENST00000492851 KRTAP11-1Q8IUC1 163 aa7.53□□□□□ -1.2
COL6A1-205ENST00000492851 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
COL6A1-205ENST00000492851 TINCRA0A1B0GVN0 87 aa7.52□□□□□ -1.21
COL6A1-205ENST00000492851 PDZD11Q5EBL8 140 aa7.52□□□□□ -1.21
COL6A1-205ENST00000492851 GNB1LQ9BYB4 327 aa7.52□□□□□ -1.21
COL6A1-205ENST00000492851 TP73-AS1Q9UF72 201 aa7.52□□□□□ -1.21
COL6A1-205ENST00000492851 TMEM218A2RU14 115 aa7.51□□□□□ -1.21
COL6A1-205ENST00000492851 LINC00469Q8N7U9 141 aa7.51□□□□□ -1.21
COL6A1-205ENST00000492851 LRP2P98164 4655 aa7.5□□□□□ -1.21
COL6A1-205ENST00000492851 KIAA1644Q3SXP7 199 aa7.5□□□□□ -1.21
COL6A1-205ENST00000492851 MRPL18Q9H0U6 180 aaKnown RBP7.5□□□□□ -1.21
COL6A1-205ENST00000492851 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
COL6A1-205ENST00000492851 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
COL6A1-205ENST00000492851 KRTAP1-4P0C5Y4 121 aa7.49□□□□□ -1.21
COL6A1-205ENST00000492851 MRPL55Q7Z7F7 128 aaKnown RBP7.49□□□□□ -1.21
COL6A1-205ENST00000492851 COX7B2Q8TF08 81 aa7.49□□□□□ -1.21
COL6A1-205ENST00000492851 SEC11CQ9BY50 192 aa7.49□□□□□ -1.21
COL6A1-205ENST00000492851 IGLV5-45A0A087WSX0 123 aa7.48□□□□□ -1.21
COL6A1-205ENST00000492851 SMIM1B2RUZ4 78 aa7.48□□□□□ -1.21
COL6A1-205ENST00000492851 H3BRM9 83 aa7.48□□□□□ -1.21
COL6A1-205ENST00000492851 RPL28P46779 137 aaKnown RBP7.48□□□□□ -1.21
COL6A1-205ENST00000492851 PMVKQ15126 192 aa7.48□□□□□ -1.21
COL6A1-205ENST00000492851 CST9LQ9H4G1 147 aa7.48□□□□□ -1.21
COL6A1-205ENST00000492851 SMCO4Q9NRQ5 59 aa7.48□□□□□ -1.21
COL6A1-205ENST00000492851 FA2HQ7L5A8 372 aa7.47□□□□□ -1.21
COL6A1-205ENST00000492851 RNF213Q63HN8 5207 aa7.46□□□□□ -1.21
COL6A1-205ENST00000492851 BCE1O60756 84 aa7.46□□□□□ -1.22
COL6A1-205ENST00000492851 ADCYAP1P18509 176 aa7.46□□□□□ -1.22
COL6A1-205ENST00000492851 ATP5LO75964 103 aa7.45□□□□□ -1.22
COL6A1-205ENST00000492851 FABP9Q0Z7S8 132 aa7.45□□□□□ -1.22
COL6A1-205ENST00000492851 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
COL6A1-205ENST00000492851 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
COL6A1-205ENST00000492851 RAB5BP61020 215 aa7.43□□□□□ -1.22
COL6A1-205ENST00000492851 RHEBQ15382 184 aa7.43□□□□□ -1.22
COL6A1-205ENST00000492851 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
COL6A1-205ENST00000492851 SPINK8P0C7L1 97 aa7.42□□□□□ -1.22
COL6A1-205ENST00000492851 CRYGAP11844 174 aa7.42□□□□□ -1.22
COL6A1-205ENST00000492851 SFTA2Q6UW10 78 aa7.42□□□□□ -1.22
COL6A1-205ENST00000492851 LINC00614P0C842 121 aa7.41□□□□□ -1.22
COL6A1-205ENST00000492851 IGLC3P0DOY3 106 aa7.41□□□□□ -1.22
COL6A1-205ENST00000492851 COX17Q14061 63 aa7.41□□□□□ -1.22
COL6A1-205ENST00000492851 PRR4Q16378 134 aa7.41□□□□□ -1.22
COL6A1-205ENST00000492851 RPS10P5Q9NQ39 176 aa7.41□□□□□ -1.22
COL6A1-205ENST00000492851 RPL37AP8A6NKH3 93 aa7.4□□□□□ -1.22
COL6A1-205ENST00000492851 NDUFA6P56556 154 aa7.4□□□□□ -1.22
COL6A1-205ENST00000492851 RPL24P83731 157 aaKnown RBP7.4□□□□□ -1.22
COL6A1-205ENST00000492851 C10orf91Q5T1B1 145 aa7.4□□□□□ -1.22
COL6A1-205ENST00000492851 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
COL6A1-205ENST00000492851 UBE2AP49459 152 aa7.39□□□□□ -1.23
COL6A1-205ENST00000492851 IFITM2Q01629 132 aa7.39□□□□□ -1.23
COL6A1-205ENST00000492851 COMMD7Q86VX2 200 aa7.39□□□□□ -1.23
COL6A1-205ENST00000492851 TYMSOSQ8TAI1 123 aa7.39□□□□□ -1.23
COL6A1-205ENST00000492851 TRAPPC1Q9Y5R8 145 aa7.39□□□□□ -1.23
COL6A1-205ENST00000492851 GAGE10A6NGK3 116 aa7.38□□□□□ -1.23
COL6A1-205ENST00000492851 HBDP02042 147 aa7.38□□□□□ -1.23
COL6A1-205ENST00000492851 PFN2P35080 140 aa7.37□□□□□ -1.23
COL6A1-205ENST00000492851 FAM229BQ4G0N7 80 aa7.37□□□□□ -1.23
COL6A1-205ENST00000492851 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
COL6A1-205ENST00000492851 ZNF22P17026 224 aaPredicted RBP7.36□□□□□ -1.23
COL6A1-205ENST00000492851 C18orf32Q8TCD1 76 aa7.36□□□□□ -1.23
COL6A1-205ENST00000492851 A0A087X002 238 aa7.35□□□□□ -1.23
COL6A1-205ENST00000492851 TSPAN13O95857 204 aa7.35□□□□□ -1.23
COL6A1-205ENST00000492851 CTAG1AP78358 180 aa7.35□□□□□ -1.23
COL6A1-205ENST00000492851 BAGE3Q86Y29 109 aa7.35□□□□□ -1.23
COL6A1-205ENST00000492851 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
COL6A1-205ENST00000492851 SND1-IT1Q9HBX3 110 aa7.35□□□□□ -1.23
COL6A1-205ENST00000492851 LPAP08519 4548 aa7.34□□□□□ -1.23
COL6A1-205ENST00000492851 IGKV2-28A0A075B6P5 120 aa7.34□□□□□ -1.23
COL6A1-205ENST00000492851 A0A096LNJ9 63 aa7.34□□□□□ -1.23
COL6A1-205ENST00000492851 IGKV2D-28P01615 120 aa7.34□□□□□ -1.23
COL6A1-205ENST00000492851 TMEM170BQ5T4T1 132 aa7.34□□□□□ -1.23
COL6A1-205ENST00000492851 IGKV2D-26A0A0A0MRZ7 120 aa7.33□□□□□ -1.24
COL6A1-205ENST00000492851 NDUFA5Q16718 116 aa7.33□□□□□ -1.24
COL6A1-205ENST00000492851 SNAPINO95295 136 aa7.32□□□□□ -1.24
COL6A1-205ENST00000492851 VPREB1P12018 145 aa7.32□□□□□ -1.24
COL6A1-205ENST00000492851 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
COL6A1-205ENST00000492851 SVBPQ8N300 66 aa7.32□□□□□ -1.24
COL6A1-205ENST00000492851 URB1-AS1Q96HZ7 61 aa7.32□□□□□ -1.24
COL6A1-205ENST00000492851 TMEM126AQ9H061 195 aa7.32□□□□□ -1.24
COL6A1-205ENST00000492851 A0A0U1RQV1 116 aa7.31□□□□□ -1.24
COL6A1-205ENST00000492851 ZNF625Q96I27 306 aaPredicted RBP7.31□□□□□ -1.24
COL6A1-205ENST00000492851 CHTOPQ9Y3Y2 248 aaKnown RBP7.31□□□□□ -1.24
COL6A1-205ENST00000492851 C11orf86A6NJI1 115 aa7.3□□□□□ -1.24
COL6A1-205ENST00000492851 LINC00587B1AMM8 73 aa7.3□□□□□ -1.24
COL6A1-205ENST00000492851 APOC3P02656 99 aa7.3□□□□□ -1.24
COL6A1-205ENST00000492851 LINC00158P58513 81 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms