RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 RPL13AP40429 203 aaKnown RBP11.89□□□□□ -0.51
SREBF1-216ENST00000490796 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
SREBF1-216ENST00000490796 XAGE1AQ9HD64 81 aa11.88□□□□□ -0.51
SREBF1-216ENST00000490796 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
SREBF1-216ENST00000490796 F8VRH5 84 aa11.87□□□□□ -0.51
SREBF1-216ENST00000490796 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
SREBF1-216ENST00000490796 C22orf24Q9Y442 160 aa11.87□□□□□ -0.51
SREBF1-216ENST00000490796 NUPR1O60356 82 aa11.86□□□□□ -0.51
SREBF1-216ENST00000490796 TOMM6Q96B49 74 aa11.86□□□□□ -0.51
SREBF1-216ENST00000490796 ZNF861PO60384 105 aa11.85□□□□□ -0.51
SREBF1-216ENST00000490796 KRTAP1-4P0C5Y4 121 aa11.85□□□□□ -0.51
SREBF1-216ENST00000490796 CXCL5P42830 114 aa11.85□□□□□ -0.51
SREBF1-216ENST00000490796 SCGB3A1Q96QR1 104 aa11.85□□□□□ -0.51
SREBF1-216ENST00000490796 KIAA1644Q3SXP7 199 aa11.84□□□□□ -0.51
SREBF1-216ENST00000490796 ERASQ7Z444 233 aa11.83□□□□□ -0.52
SREBF1-216ENST00000490796 CARHSP1Q9Y2V2 147 aaKnown RBP11.83□□□□□ -0.52
SREBF1-216ENST00000490796 LPAP08519 4548 aa11.81□□□□□ -0.52
SREBF1-216ENST00000490796 PRR4Q16378 134 aa11.81□□□□□ -0.52
SREBF1-216ENST00000490796 MRPL55Q7Z7F7 128 aaKnown RBP11.81□□□□□ -0.52
SREBF1-216ENST00000490796 LINC01549A6NIU2 74 aa11.8□□□□□ -0.52
SREBF1-216ENST00000490796 TP73-AS1Q9UF72 201 aa11.8□□□□□ -0.52
SREBF1-216ENST00000490796 TRAV9-1A0A075B6T8 112 aa11.79□□□□□ -0.52
SREBF1-216ENST00000490796 TINCRA0A1B0GVN0 87 aa11.79□□□□□ -0.52
SREBF1-216ENST00000490796 S100PP25815 95 aa11.79□□□□□ -0.52
SREBF1-216ENST00000490796 RPL28P46779 137 aaKnown RBP11.79□□□□□ -0.52
SREBF1-216ENST00000490796 PDZD11Q5EBL8 140 aa11.79□□□□□ -0.52
SREBF1-216ENST00000490796 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
SREBF1-216ENST00000490796 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
SREBF1-216ENST00000490796 CLLU1Q5K131 121 aa11.77□□□□□ -0.53
SREBF1-216ENST00000490796 BCE1O60756 84 aa11.76□□□□□ -0.53
SREBF1-216ENST00000490796 ADCYAP1P18509 176 aa11.76□□□□□ -0.53
SREBF1-216ENST00000490796 RAB5BP61020 215 aa11.75□□□□□ -0.53
SREBF1-216ENST00000490796 UQCC3Q6UW78 93 aa11.75□□□□□ -0.53
SREBF1-216ENST00000490796 FA2HQ7L5A8 372 aa11.75□□□□□ -0.53
SREBF1-216ENST00000490796 SMCO4Q9NRQ5 59 aa11.75□□□□□ -0.53
SREBF1-216ENST00000490796 RPL37AP8A6NKH3 93 aa11.74□□□□□ -0.53
SREBF1-216ENST00000490796 SPINK8P0C7L1 97 aa11.74□□□□□ -0.53
SREBF1-216ENST00000490796 NKAPP1Q8N9T2 125 aa11.74□□□□□ -0.53
SREBF1-216ENST00000490796 LINC00167Q96N53 147 aa11.74□□□□□ -0.53
SREBF1-216ENST00000490796 GNB1LQ9BYB4 327 aa11.74□□□□□ -0.53
SREBF1-216ENST00000490796 CST9LQ9H4G1 147 aa11.74□□□□□ -0.53
SREBF1-216ENST00000490796 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
SREBF1-216ENST00000490796 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
SREBF1-216ENST00000490796 GAGE10A6NGK3 116 aa11.73□□□□□ -0.53
SREBF1-216ENST00000490796 H3BRM9 83 aa11.73□□□□□ -0.53
SREBF1-216ENST00000490796 PMVKQ15126 192 aa11.73□□□□□ -0.53
SREBF1-216ENST00000490796 TSPAN13O95857 204 aa11.72□□□□□ -0.53
SREBF1-216ENST00000490796 MRPL18Q9H0U6 180 aaKnown RBP11.72□□□□□ -0.53
SREBF1-216ENST00000490796 ATP5LO75964 103 aa11.71□□□□□ -0.53
SREBF1-216ENST00000490796 CRYGAP11844 174 aa11.71□□□□□ -0.53
SREBF1-216ENST00000490796 COX19Q49B96 90 aa11.71□□□□□ -0.53
SREBF1-216ENST00000490796 UBE2AP49459 152 aa11.7□□□□□ -0.54
SREBF1-216ENST00000490796 FABP9Q0Z7S8 132 aa11.7□□□□□ -0.54
SREBF1-216ENST00000490796 TYMSOSQ8TAI1 123 aa11.7□□□□□ -0.54
SREBF1-216ENST00000490796 LINC01546A6NGU7 62 aa11.69□□□□□ -0.54
SREBF1-216ENST00000490796 NDUFA6P56556 154 aa11.68□□□□□ -0.54
SREBF1-216ENST00000490796 SEC11CQ9BY50 192 aa11.68□□□□□ -0.54
SREBF1-216ENST00000490796 IGLV5-37A0A075B6J1 123 aa11.66□□□□□ -0.54
SREBF1-216ENST00000490796 A0A087X002 238 aa11.66□□□□□ -0.54
SREBF1-216ENST00000490796 PFN2P35080 140 aa11.65□□□□□ -0.54
SREBF1-216ENST00000490796 IGKV2-28A0A075B6P5 120 aa11.64□□□□□ -0.55
SREBF1-216ENST00000490796 IGKV2D-28P01615 120 aa11.64□□□□□ -0.55
SREBF1-216ENST00000490796 IGLC3P0DOY3 106 aa11.62□□□□□ -0.55
SREBF1-216ENST00000490796 ANAPC11Q9NYG5 84 aa11.62□□□□□ -0.55
SREBF1-216ENST00000490796 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
SREBF1-216ENST00000490796 SCO1O75880 301 aa11.6□□□□□ -0.55
SREBF1-216ENST00000490796 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
SREBF1-216ENST00000490796 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
SREBF1-216ENST00000490796 IGLV5-39A0A0G2JS06 123 aa11.59□□□□□ -0.55
SREBF1-216ENST00000490796 RHEBQ15382 184 aa11.59□□□□□ -0.55
SREBF1-216ENST00000490796 COMMD7Q86VX2 200 aa11.59□□□□□ -0.55
SREBF1-216ENST00000490796 HBDP02042 147 aa11.58□□□□□ -0.56
SREBF1-216ENST00000490796 ZNF22P17026 224 aaPredicted RBP11.58□□□□□ -0.56
SREBF1-216ENST00000490796 KRTAP13-1Q8IUC0 172 aa11.58□□□□□ -0.56
SREBF1-216ENST00000490796 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
SREBF1-216ENST00000490796 IGKV2D-26A0A0A0MRZ7 120 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 A0A0U1RQV1 116 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 LINC00614P0C842 121 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 COX17Q14061 63 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 FAM229BQ4G0N7 80 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 FAM19A1Q7Z5A9 133 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
SREBF1-216ENST00000490796 TRAPPC1Q9Y5R8 145 aa11.57□□□□□ -0.56
SREBF1-216ENST00000490796 PRLHP81277 87 aa11.56□□□□□ -0.56
SREBF1-216ENST00000490796 IFITM2Q01629 132 aa11.56□□□□□ -0.56
SREBF1-216ENST00000490796 TMEM170BQ5T4T1 132 aa11.56□□□□□ -0.56
SREBF1-216ENST00000490796 SFTA2Q6UW10 78 aa11.56□□□□□ -0.56
SREBF1-216ENST00000490796 VPREB1P12018 145 aa11.55□□□□□ -0.56
SREBF1-216ENST00000490796 BAGE3Q86Y29 109 aa11.55□□□□□ -0.56
SREBF1-216ENST00000490796 LINC00304Q8N9R0 145 aa11.55□□□□□ -0.56
SREBF1-216ENST00000490796 A0A096LNJ9 63 aa11.54□□□□□ -0.56
SREBF1-216ENST00000490796 PMCHL1Q16048 86 aa11.54□□□□□ -0.56
SREBF1-216ENST00000490796 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
SREBF1-216ENST00000490796 C18orf32Q8TCD1 76 aa11.54□□□□□ -0.56
SREBF1-216ENST00000490796 TMEM126AQ9H061 195 aa11.54□□□□□ -0.56
SREBF1-216ENST00000490796 MUC2Q02817 5179 aa11.54□□□□□ -0.56
SREBF1-216ENST00000490796 TMEM238C9JI98 176 aa11.53□□□□□ -0.56
SREBF1-216ENST00000490796 C11orf86A6NJI1 115 aa11.51□□□□□ -0.57
SREBF1-216ENST00000490796 C10orf91Q5T1B1 145 aa11.51□□□□□ -0.57
SREBF1-216ENST00000490796 URB1-AS1Q96HZ7 61 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms