RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 CD164L2Q6UWJ8 174 aa18.1■□□□□ 0.49
KCNC4-207ENST00000489935 LINC01561Q8N1V8 128 aa18.1■□□□□ 0.49
KCNC4-207ENST00000489935 DNAH3Q8TD57 4116 aa18.09■□□□□ 0.49
KCNC4-207ENST00000489935 IBA57-AS1B1ANH7 110 aa18.08■□□□□ 0.49
KCNC4-207ENST00000489935 LYPD5Q6UWN5 251 aa18.08■□□□□ 0.48
KCNC4-207ENST00000489935 Q8IZM0 81 aa18.08■□□□□ 0.48
KCNC4-207ENST00000489935 COX6CP09669 75 aa18.07■□□□□ 0.48
KCNC4-207ENST00000489935 SLC25A20O43772 301 aa18.06■□□□□ 0.48
KCNC4-207ENST00000489935 LINC01620Q4KN68 170 aa18.06■□□□□ 0.48
KCNC4-207ENST00000489935 PFN2P35080 140 aa18.06■□□□□ 0.48
KCNC4-207ENST00000489935 BAHCC1Q9P281 2608 aa18.05■□□□□ 0.48
KCNC4-207ENST00000489935 CLEC2BQ92478 149 aa18.05■□□□□ 0.48
KCNC4-207ENST00000489935 COX7A2LO14548 114 aa18.04■□□□□ 0.48
KCNC4-207ENST00000489935 C2orf82Q6UX34 121 aa18.04■□□□□ 0.48
KCNC4-207ENST00000489935 Q6ZTC4 211 aa18.04■□□□□ 0.48
KCNC4-207ENST00000489935 FOXI1Q12951 378 aa18.04■□□□□ 0.48
KCNC4-207ENST00000489935 TENM3Q9P273 2699 aa18.03■□□□□ 0.48
KCNC4-207ENST00000489935 TEN1Q86WV5 123 aa18.03■□□□□ 0.48
KCNC4-207ENST00000489935 KIAA0087Q14695 138 aa18.02■□□□□ 0.48
KCNC4-207ENST00000489935 J3QR89 54 aa18.02■□□□□ 0.47
KCNC4-207ENST00000489935 CCL18P55774 89 aa18.02■□□□□ 0.47
KCNC4-207ENST00000489935 CARD19Q96LW7 228 aa18.02■□□□□ 0.47
KCNC4-207ENST00000489935 SND1-IT1Q9HBX3 110 aa18.02■□□□□ 0.47
KCNC4-207ENST00000489935 KPRPQ5T749 579 aaPredicted RBP18.01■□□□□ 0.47
KCNC4-207ENST00000489935 COL6A5A8TX70 2615 aa18.01■□□□□ 0.47
KCNC4-207ENST00000489935 IGKV2-28A0A075B6P5 120 aa18■□□□□ 0.47
KCNC4-207ENST00000489935 IGKV2D-28P01615 120 aa18■□□□□ 0.47
KCNC4-207ENST00000489935 ANKRD29Q8N6D5 301 aa18■□□□□ 0.47
KCNC4-207ENST00000489935 H3BNG1 76 aa18■□□□□ 0.47
KCNC4-207ENST00000489935 KLK12Q9UKR0 248 aa18■□□□□ 0.47
KCNC4-207ENST00000489935 A0A0J9YWU9 116 aa17.99■□□□□ 0.47
KCNC4-207ENST00000489935 M0QXV9 152 aa17.99■□□□□ 0.47
KCNC4-207ENST00000489935 PRR34Q9NV39 138 aa17.99■□□□□ 0.47
KCNC4-207ENST00000489935 LST1O00453 97 aa17.99■□□□□ 0.47
KCNC4-207ENST00000489935 MALP21145 153 aa17.98■□□□□ 0.47
KCNC4-207ENST00000489935 LINC00337Q8N6G1 96 aa17.98■□□□□ 0.47
KCNC4-207ENST00000489935 TRBV10-2A0A0K0K1G8 114 aa17.97■□□□□ 0.47
KCNC4-207ENST00000489935 CKS1BP61024 79 aa17.97■□□□□ 0.47
KCNC4-207ENST00000489935 ENHOQ6UWT2 76 aa17.97■□□□□ 0.47
KCNC4-207ENST00000489935 GAGE12HA6NDE8 117 aa17.96■□□□□ 0.47
KCNC4-207ENST00000489935 PPDPFLQ8WWR9 84 aa17.96■□□□□ 0.47
KCNC4-207ENST00000489935 LINC01600Q96MT4 127 aa17.95■□□□□ 0.46
KCNC4-207ENST00000489935 NOTCH1P46531 2555 aa17.95■□□□□ 0.46
KCNC4-207ENST00000489935 TRAV13-2A0A0B4J235 113 aa17.95■□□□□ 0.46
KCNC4-207ENST00000489935 NANOS2P60321 138 aaKnown RBP17.95■□□□□ 0.46
KCNC4-207ENST00000489935 CFAP161Q6P656 301 aa17.93■□□□□ 0.46
KCNC4-207ENST00000489935 CRPP02741 224 aa17.93■□□□□ 0.46
KCNC4-207ENST00000489935 PRB2P02812 416 aaPredicted RBP17.92■□□□□ 0.46
KCNC4-207ENST00000489935 WFDC10BQ8IUB3 73 aa17.92■□□□□ 0.46
KCNC4-207ENST00000489935 CXCL5P42830 114 aa17.9■□□□□ 0.46
KCNC4-207ENST00000489935 KLK5Q9Y337 293 aaPredicted RBP17.9■□□□□ 0.46
KCNC4-207ENST00000489935 C11orf45Q8TAV5 145 aa17.9■□□□□ 0.46
KCNC4-207ENST00000489935 DEFB131BA0A096LNP1 70 aa17.88■□□□□ 0.45
KCNC4-207ENST00000489935 RPL28P46779 137 aaKnown RBP17.88■□□□□ 0.45
KCNC4-207ENST00000489935 PCP4P48539 62 aa17.88■□□□□ 0.45
KCNC4-207ENST00000489935 ESRGQ1W209 222 aa17.88■□□□□ 0.45
KCNC4-207ENST00000489935 C9orf116Q5BN46 136 aaPredicted RBP17.88■□□□□ 0.45
KCNC4-207ENST00000489935 NTN5Q8WTR8 489 aaPredicted RBP17.88■□□□□ 0.45
KCNC4-207ENST00000489935 C6orf223Q8N319 242 aa17.87■□□□□ 0.45
KCNC4-207ENST00000489935 UBE2WQ96B02 151 aa17.87■□□□□ 0.45
KCNC4-207ENST00000489935 SPATA25Q9BR10 227 aa17.86■□□□□ 0.45
KCNC4-207ENST00000489935 COX17Q14061 63 aa17.85■□□□□ 0.45
KCNC4-207ENST00000489935 H3BT86 120 aa17.84■□□□□ 0.45
KCNC4-207ENST00000489935 SMIM11BQ8TCY0 68 aa17.84■□□□□ 0.45
KCNC4-207ENST00000489935 LINC00526Q96FQ7 95 aa17.84■□□□□ 0.45
KCNC4-207ENST00000489935 SPAG11BQ08648 103 aa17.84■□□□□ 0.45
KCNC4-207ENST00000489935 C10orf25Q5T742 122 aa17.84■□□□□ 0.45
KCNC4-207ENST00000489935 FAM218AQ96MZ4 157 aa17.84■□□□□ 0.45
KCNC4-207ENST00000489935 UNQ6190/PRO20217Q6UXQ8 127 aa17.83■□□□□ 0.44
KCNC4-207ENST00000489935 NBEAL1Q6ZS30 2694 aa17.82■□□□□ 0.44
KCNC4-207ENST00000489935 TRAV8-4A0A0B4J246 113 aa17.82■□□□□ 0.44
KCNC4-207ENST00000489935 TEX49A0A1B0GTD5 131 aa17.82■□□□□ 0.44
KCNC4-207ENST00000489935 K7EIL1 84 aa17.8■□□□□ 0.44
KCNC4-207ENST00000489935 PRR3P79522 188 aaKnown RBP17.79■□□□□ 0.44
KCNC4-207ENST00000489935 CDIP1Q9H305 208 aa17.79■□□□□ 0.44
KCNC4-207ENST00000489935 OR13C6PQ8NH95 151 aa17.78■□□□□ 0.44
KCNC4-207ENST00000489935 TRACP01848 142 aa17.77■□□□□ 0.44
KCNC4-207ENST00000489935 KRTAP26-1Q6PEX3 210 aa17.77■□□□□ 0.43
KCNC4-207ENST00000489935 TM2D3Q9BRN9 247 aa17.77■□□□□ 0.43
KCNC4-207ENST00000489935 MRAPQ8TCY5 172 aa17.76■□□□□ 0.43
KCNC4-207ENST00000489935 SIGMAR1Q99720 223 aa17.76■□□□□ 0.43
KCNC4-207ENST00000489935 DEFB121Q5J5C9 76 aa17.75■□□□□ 0.43
KCNC4-207ENST00000489935 C21orf62-AS1Q17RA5 79 aa17.74■□□□□ 0.43
KCNC4-207ENST00000489935 NDUFC2O95298 119 aa17.73■□□□□ 0.43
KCNC4-207ENST00000489935 Q8NDZ9 215 aa17.73■□□□□ 0.43
KCNC4-207ENST00000489935 LINC01556Q5JQF7 62 aa17.7■□□□□ 0.42
KCNC4-207ENST00000489935 HUWE1Q7Z6Z7 4374 aaKnown RBP17.69■□□□□ 0.42
KCNC4-207ENST00000489935 A0A087WYN8 130 aa17.69■□□□□ 0.42
KCNC4-207ENST00000489935 H0YGX0 51 aa17.68■□□□□ 0.42
KCNC4-207ENST00000489935 Q9HAA7 133 aa17.68■□□□□ 0.42
KCNC4-207ENST00000489935 C6orf48Q9UBA6 75 aa17.68■□□□□ 0.42
KCNC4-207ENST00000489935 GVQW2A0A096LPI5 108 aaPredicted RBP17.68■□□□□ 0.42
KCNC4-207ENST00000489935 TRAV10A0A0B4J240 114 aa17.68■□□□□ 0.42
KCNC4-207ENST00000489935 BAALC-AS2P0C853 105 aa17.68■□□□□ 0.42
KCNC4-207ENST00000489935 C22orf24Q9Y442 160 aa17.66■□□□□ 0.42
KCNC4-207ENST00000489935 HIGD2BQ4VC39 106 aa17.66■□□□□ 0.42
KCNC4-207ENST00000489935 MUC7Q8TAX7 377 aa17.64■□□□□ 0.41
KCNC4-207ENST00000489935 MGAM2Q2M2H8 2515 aa17.64■□□□□ 0.41
KCNC4-207ENST00000489935 NCR3O14931 201 aa17.64■□□□□ 0.41
KCNC4-207ENST00000489935 C15orf56Q8N910 161 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms