RNA–Protein interactions for RNA: ENST00000489892.1

TRIM40-208, Transcript of tripartite motif containing 40, humanhuman

TSL 3

Gene TRIM40, Length 941 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-208ENST00000489892 FAM104AQ969W3 186 aa8.02□□□□□ -1.13
TRIM40-208ENST00000489892 LYSTQ99698 3801 aa8.02□□□□□ -1.13
TRIM40-208ENST00000489892 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
TRIM40-208ENST00000489892 PSMB2P49721 201 aa8.01□□□□□ -1.13
TRIM40-208ENST00000489892 WFDC2Q14508 124 aa8.01□□□□□ -1.13
TRIM40-208ENST00000489892 MUSTN1Q8IVN3 82 aa8.01□□□□□ -1.13
TRIM40-208ENST00000489892 LINC01600Q96MT4 127 aa8.01□□□□□ -1.13
TRIM40-208ENST00000489892 TRBV30A0A0K0K1B3 111 aa8□□□□□ -1.13
TRIM40-208ENST00000489892 HERV-K104P63124 156 aa8□□□□□ -1.13
TRIM40-208ENST00000489892 ATXN8Q156A1 80 aa8□□□□□ -1.13
TRIM40-208ENST00000489892 ESRGQ1W209 222 aa8□□□□□ -1.13
TRIM40-208ENST00000489892 PPDPFLQ8WWR9 84 aa8□□□□□ -1.13
TRIM40-208ENST00000489892 CRPP02741 224 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 ANGP03950 147 aaKnown RBP7.99□□□□□ -1.13
TRIM40-208ENST00000489892 COX6CP09669 75 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 SCGB1C2P0DMR2 95 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 SS18Q15532 418 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 ETDBQ3ZM63 59 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 LINC01556Q5JQF7 62 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 TEN1Q86WV5 123 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 LITAFQ99732 161 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 CSMD3Q7Z407 3707 aa7.99□□□□□ -1.13
TRIM40-208ENST00000489892 HUWE1Q7Z6Z7 4374 aaKnown RBP7.99□□□□□ -1.13
TRIM40-208ENST00000489892 IGLV4-60A0A075B6I1 120 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 IGHV3-64A0A075B6Q5 118 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 TRAV13-1A0A0B4J241 112 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 IGLV5-39A0A0G2JS06 123 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 LCE6AA0A183 80 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 TCL1BO95988 128 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 FOXI1Q12951 378 aa7.98□□□□□ -1.13
TRIM40-208ENST00000489892 TRAV8-4A0A0B4J246 113 aa7.97□□□□□ -1.13
TRIM40-208ENST00000489892 DNAH10OSP0CZ25 163 aa7.97□□□□□ -1.13
TRIM40-208ENST00000489892 Q1RN00 199 aa7.97□□□□□ -1.13
TRIM40-208ENST00000489892 RNASE13Q5GAN3 156 aaKnown RBP7.97□□□□□ -1.13
TRIM40-208ENST00000489892 SFTA2Q6UW10 78 aa7.97□□□□□ -1.13
TRIM40-208ENST00000489892 UBE2DNLQ8IWF7 75 aa7.97□□□□□ -1.13
TRIM40-208ENST00000489892 SIGMAR1Q99720 223 aa7.97□□□□□ -1.13
TRIM40-208ENST00000489892 TRAV8-3A0A0A6YYJ7 113 aa7.96□□□□□ -1.14
TRIM40-208ENST00000489892 SPINK8P0C7L1 97 aa7.96□□□□□ -1.14
TRIM40-208ENST00000489892 REG3AQ06141 175 aa7.96□□□□□ -1.14
TRIM40-208ENST00000489892 APLNQ9ULZ1 77 aa7.96□□□□□ -1.14
TRIM40-208ENST00000489892 LINC00959A0A1B0GUT2 108 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 LINC00242Q5T6M2 205 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 LINC00269Q8N2A0 174 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 PRR34Q9NV39 138 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 CDKN2A-AS1Q9UH64 79 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 LINC00588Q9Y4M8 146 aa7.95□□□□□ -1.14
TRIM40-208ENST00000489892 H3BT86 120 aa7.94□□□□□ -1.14
TRIM40-208ENST00000489892 SLC25A20O43772 301 aa7.94□□□□□ -1.14
TRIM40-208ENST00000489892 SMCPP49901 116 aaPredicted RBP7.94□□□□□ -1.14
TRIM40-208ENST00000489892 C21orf62-AS1Q17RA5 79 aa7.94□□□□□ -1.14
TRIM40-208ENST00000489892 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
TRIM40-208ENST00000489892 KLK12Q9UKR0 248 aa7.94□□□□□ -1.14
TRIM40-208ENST00000489892 STARD9Q9P2P6 4700 aa7.93□□□□□ -1.14
TRIM40-208ENST00000489892 IGKV3OR2-268A0A0C4DH90 116 aa7.93□□□□□ -1.14
TRIM40-208ENST00000489892 SMIM1B2RUZ4 78 aa7.93□□□□□ -1.14
TRIM40-208ENST00000489892 CD164L2Q6UWJ8 174 aa7.93□□□□□ -1.14
TRIM40-208ENST00000489892 RMI2Q96E14 147 aa7.93□□□□□ -1.14
TRIM40-208ENST00000489892 TRBV10-2A0A0K0K1G8 114 aa7.92□□□□□ -1.14
TRIM40-208ENST00000489892 PRSS2P07478 247 aa7.92□□□□□ -1.14
TRIM40-208ENST00000489892 LINC01620Q4KN68 170 aa7.92□□□□□ -1.14
TRIM40-208ENST00000489892 TTC32Q5I0X7 151 aa7.92□□□□□ -1.14
TRIM40-208ENST00000489892 A0A087WZ39 114 aa7.91□□□□□ -1.14
TRIM40-208ENST00000489892 EIF4EBP3O60516 100 aaPredicted RBP7.91□□□□□ -1.14
TRIM40-208ENST00000489892 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
TRIM40-208ENST00000489892 CHCHD10Q8WYQ3 142 aaPredicted RBP7.91□□□□□ -1.14
TRIM40-208ENST00000489892 UBE2WQ96B02 151 aa7.91□□□□□ -1.14
TRIM40-208ENST00000489892 Q9H8V8 135 aa7.91□□□□□ -1.14
TRIM40-208ENST00000489892 IGHV3OR16-9A0A0B4J2B5 98 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 C9JAW5 83 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 COX7A2LO14548 114 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 TRIAP1O43715 76 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 RPL13AP40429 203 aaKnown RBP7.9□□□□□ -1.14
TRIM40-208ENST00000489892 XCL1P47992 114 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 CLPSL2Q6UWE3 100 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 LINC00308Q8TCZ7 52 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
TRIM40-208ENST00000489892 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
TRIM40-208ENST00000489892 MALP21145 153 aa7.89□□□□□ -1.15
TRIM40-208ENST00000489892 MEIG1Q5JSS6 88 aa7.89□□□□□ -1.15
TRIM40-208ENST00000489892 ADAMTSL4-AS1Q5T5F5 129 aa7.89□□□□□ -1.15
TRIM40-208ENST00000489892 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
TRIM40-208ENST00000489892 CARD19Q96LW7 228 aa7.89□□□□□ -1.15
TRIM40-208ENST00000489892 IBA57-AS1B1ANH7 110 aa7.88□□□□□ -1.15
TRIM40-208ENST00000489892 LST1O00453 97 aa7.88□□□□□ -1.15
TRIM40-208ENST00000489892 COX6A2Q02221 97 aa7.88□□□□□ -1.15
TRIM40-208ENST00000489892 ENHOQ6UWT2 76 aa7.88□□□□□ -1.15
TRIM40-208ENST00000489892 H7C2G1 150 aa7.87□□□□□ -1.15
TRIM40-208ENST00000489892 Q8N3U1 123 aa7.87□□□□□ -1.15
TRIM40-208ENST00000489892 COX7B2Q8TF08 81 aa7.87□□□□□ -1.15
TRIM40-208ENST00000489892 IGLV10-54A0A075B6I4 117 aa7.86□□□□□ -1.15
TRIM40-208ENST00000489892 TRAV13-2A0A0B4J235 113 aa7.86□□□□□ -1.15
TRIM40-208ENST00000489892 CXCL5P42830 114 aa7.86□□□□□ -1.15
TRIM40-208ENST00000489892 CFAP161Q6P656 301 aa7.86□□□□□ -1.15
TRIM40-208ENST00000489892 C5orf38Q86SI9 138 aa7.85□□□□□ -1.15
TRIM40-208ENST00000489892 IGKV2D-24A0A075B6R9 120 aa7.84□□□□□ -1.15
TRIM40-208ENST00000489892 C2orf82Q6UX34 121 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms