RNA–Protein interactions for RNA: ENST00000488628.1

SUN1-233, Transcript of Sad1 and UNC84 domain containing 1, human

TSL 4

Gene SUN1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUN1-233	ENST00000488628	GNB1L	Q9BYB4	327 aa		10.38	□□□□□ -0.75
SUN1-233	ENST00000488628	CKS1B	P61024	79 aa		10.37	□□□□□ -0.75
SUN1-233	ENST00000488628	HERVK_113	P63121	156 aa		10.37	□□□□□ -0.75
SUN1-233	ENST00000488628	ERAS	Q7Z444	233 aa		10.37	□□□□□ -0.75
SUN1-233	ENST00000488628	COMMD7	Q86VX2	200 aa		10.37	□□□□□ -0.75
SUN1-233	ENST00000488628	LINC01546	A6NGU7	62 aa		10.36	□□□□□ -0.75
SUN1-233	ENST00000488628	G0S2	P27469	103 aa		10.36	□□□□□ -0.75
SUN1-233	ENST00000488628	PAPPA-AS1	Q5QFB9	102 aa		10.36	□□□□□ -0.75
SUN1-233	ENST00000488628	GEMIN7	Q9H840	131 aa	Known RBP	10.36	□□□□□ -0.75
SUN1-233	ENST00000488628	S100P	P25815	95 aa		10.35	□□□□□ -0.75
SUN1-233	ENST00000488628	UBE2B	P63146	152 aa		10.34	□□□□□ -0.75
SUN1-233	ENST00000488628	SEC11A	P67812	179 aa		10.34	□□□□□ -0.75
SUN1-233	ENST00000488628	C10orf91	Q5T1B1	145 aa		10.34	□□□□□ -0.75
SUN1-233	ENST00000488628	DIRC1	Q969H9	104 aa		10.34	□□□□□ -0.75
SUN1-233	ENST00000488628	XAGE1A	Q9HD64	81 aa		10.34	□□□□□ -0.75
SUN1-233	ENST00000488628	SMIM1	B2RUZ4	78 aa		10.33	□□□□□ -0.76
SUN1-233	ENST00000488628		H0Y9J4	135 aa		10.33	□□□□□ -0.76
SUN1-233	ENST00000488628	PRR26	Q8N8Z3	221 aa		10.33	□□□□□ -0.76
SUN1-233	ENST00000488628	MRPL18	Q9H0U6	180 aa	Known RBP	10.33	□□□□□ -0.76
SUN1-233	ENST00000488628	CST9L	Q9H4G1	147 aa		10.33	□□□□□ -0.76
SUN1-233	ENST00000488628	TINCR	A0A1B0GVN0	87 aa		10.32	□□□□□ -0.76
SUN1-233	ENST00000488628	FABP9	Q0Z7S8	132 aa		10.32	□□□□□ -0.76
SUN1-233	ENST00000488628	IGLV5-45	A0A087WSX0	123 aa		10.31	□□□□□ -0.76
SUN1-233	ENST00000488628		F8VRH5	84 aa		10.31	□□□□□ -0.76
SUN1-233	ENST00000488628	RPS10P5	Q9NQ39	176 aa		10.31	□□□□□ -0.76
SUN1-233	ENST00000488628	C22orf24	Q9Y442	160 aa		10.31	□□□□□ -0.76
SUN1-233	ENST00000488628	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.3	□□□□□ -0.76
SUN1-233	ENST00000488628	LPA	P08519	4548 aa		10.3	□□□□□ -0.76
SUN1-233	ENST00000488628	KRTAP1-4	P0C5Y4	121 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	SPINK8	P0C7L1	97 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	COX19	Q49B96	90 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	PDZD11	Q5EBL8	140 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	FA2H	Q7L5A8	372 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	COX7B2	Q8TF08	81 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	RNF213	Q63HN8	5207 aa		10.29	□□□□□ -0.76
SUN1-233	ENST00000488628	PMVK	Q15126	192 aa		10.28	□□□□□ -0.76
SUN1-233	ENST00000488628	RHEB	Q15382	184 aa		10.28	□□□□□ -0.76
SUN1-233	ENST00000488628	URB1-AS1	Q96HZ7	61 aa		10.28	□□□□□ -0.76
SUN1-233	ENST00000488628		A0A096LNJ9	63 aa		10.27	□□□□□ -0.77
SUN1-233	ENST00000488628	SMCO4	Q9NRQ5	59 aa		10.27	□□□□□ -0.77
SUN1-233	ENST00000488628	CXCL5	P42830	114 aa		10.26	□□□□□ -0.77
SUN1-233	ENST00000488628	LINC01549	A6NIU2	74 aa		10.25	□□□□□ -0.77
SUN1-233	ENST00000488628	RAB5B	P61020	215 aa		10.24	□□□□□ -0.77
SUN1-233	ENST00000488628	C18orf32	Q8TCD1	76 aa		10.24	□□□□□ -0.77
SUN1-233	ENST00000488628	ZNF861P	O60384	105 aa		10.23	□□□□□ -0.77
SUN1-233	ENST00000488628	PMCHL1	Q16048	86 aa		10.23	□□□□□ -0.77
SUN1-233	ENST00000488628	LBH	Q53QV2	105 aa	Predicted RBP	10.23	□□□□□ -0.77
SUN1-233	ENST00000488628	MRPL55	Q7Z7F7	128 aa	Known RBP	10.23	□□□□□ -0.77
SUN1-233	ENST00000488628	TRAPPC1	Q9Y5R8	145 aa		10.23	□□□□□ -0.77
SUN1-233	ENST00000488628	IGLC3	P0DOY3	106 aa		10.22	□□□□□ -0.77
SUN1-233	ENST00000488628	NDUFA6	P56556	154 aa		10.22	□□□□□ -0.77
SUN1-233	ENST00000488628	TP73-AS1	Q9UF72	201 aa		10.22	□□□□□ -0.77
SUN1-233	ENST00000488628	IGLV1-50	A0A075B6I6	118 aa		10.21	□□□□□ -0.77
SUN1-233	ENST00000488628	RPL37AP8	A6NKH3	93 aa		10.21	□□□□□ -0.77
SUN1-233	ENST00000488628	NUPR1	O60356	82 aa		10.21	□□□□□ -0.77
SUN1-233	ENST00000488628	LINC00614	P0C842	121 aa		10.21	□□□□□ -0.77
SUN1-233	ENST00000488628	LINC00167	Q96N53	147 aa		10.21	□□□□□ -0.77
SUN1-233	ENST00000488628	APOC3	P02656	99 aa		10.2	□□□□□ -0.78
SUN1-233	ENST00000488628	IGLV5-39	A0A0G2JS06	123 aa		10.19	□□□□□ -0.78
SUN1-233	ENST00000488628	GAGE10	A6NGK3	116 aa		10.19	□□□□□ -0.78
SUN1-233	ENST00000488628		H3BRM9	83 aa		10.19	□□□□□ -0.78
SUN1-233	ENST00000488628	ZNF22	P17026	224 aa	Predicted RBP	10.19	□□□□□ -0.78
SUN1-233	ENST00000488628	SCO1	O75880	301 aa		10.18	□□□□□ -0.78
SUN1-233	ENST00000488628	HBD	P02042	147 aa		10.18	□□□□□ -0.78
SUN1-233	ENST00000488628	BCE1	O60756	84 aa		10.17	□□□□□ -0.78
SUN1-233	ENST00000488628	IGLV5-37	A0A075B6J1	123 aa		10.16	□□□□□ -0.78
SUN1-233	ENST00000488628	ATP5L	O75964	103 aa		10.16	□□□□□ -0.78
SUN1-233	ENST00000488628	PFN2	P35080	140 aa		10.16	□□□□□ -0.78
SUN1-233	ENST00000488628	C11orf86	A6NJI1	115 aa		10.15	□□□□□ -0.78
SUN1-233	ENST00000488628	YPEL4	Q96NS1	127 aa		10.15	□□□□□ -0.78
SUN1-233	ENST00000488628	BAGE3	Q86Y29	109 aa		10.14	□□□□□ -0.79
SUN1-233	ENST00000488628	SNAPIN	O95295	136 aa		10.13	□□□□□ -0.79
SUN1-233	ENST00000488628	RPL28	P46779	137 aa	Known RBP	10.13	□□□□□ -0.79
SUN1-233	ENST00000488628	SVBP	Q8N300	66 aa		10.13	□□□□□ -0.79
SUN1-233	ENST00000488628	ZNF625	Q96I27	306 aa	Predicted RBP	10.13	□□□□□ -0.79
SUN1-233	ENST00000488628		A0A087X002	238 aa		10.12	□□□□□ -0.79
SUN1-233	ENST00000488628	RPL13A	P40429	203 aa	Known RBP	10.12	□□□□□ -0.79
SUN1-233	ENST00000488628	NKAPP1	Q8N9T2	125 aa		10.12	□□□□□ -0.79
SUN1-233	ENST00000488628	SND1-IT1	Q9HBX3	110 aa		10.12	□□□□□ -0.79
SUN1-233	ENST00000488628	ERG28	Q9UKR5	140 aa		10.12	□□□□□ -0.79
SUN1-233	ENST00000488628	KRTAP13-1	Q8IUC0	172 aa		10.11	□□□□□ -0.79
SUN1-233	ENST00000488628		Q8NDZ9	215 aa		10.11	□□□□□ -0.79
SUN1-233	ENST00000488628	ANAPC11	Q9NYG5	84 aa		10.11	□□□□□ -0.79
SUN1-233	ENST00000488628	IGKV2-28	A0A075B6P5	120 aa		10.1	□□□□□ -0.79
SUN1-233	ENST00000488628	IGKV2D-28	P01615	120 aa		10.1	□□□□□ -0.79
SUN1-233	ENST00000488628	VPREB1	P12018	145 aa		10.1	□□□□□ -0.79
SUN1-233	ENST00000488628	NDUFA5	Q16718	116 aa		10.1	□□□□□ -0.79
SUN1-233	ENST00000488628	TMEM170B	Q5T4T1	132 aa		10.1	□□□□□ -0.79
SUN1-233	ENST00000488628	CHTOP	Q9Y3Y2	248 aa	Known RBP	10.09	□□□□□ -0.79
SUN1-233	ENST00000488628	TMEM238	C9JI98	176 aa		10.06	□□□□□ -0.8
SUN1-233	ENST00000488628	TSPAN13	O95857	204 aa		10.06	□□□□□ -0.8
SUN1-233	ENST00000488628	UBE2A	P49459	152 aa		10.06	□□□□□ -0.8
SUN1-233	ENST00000488628	COX17	Q14061	63 aa		10.06	□□□□□ -0.8
SUN1-233	ENST00000488628	TMEM223	A0PJW6	202 aa		10.05	□□□□□ -0.8
SUN1-233	ENST00000488628	PRR4	Q16378	134 aa		10.05	□□□□□ -0.8
SUN1-233	ENST00000488628	CBLN2	Q8IUK8	224 aa		10.05	□□□□□ -0.8
SUN1-233	ENST00000488628	IFI27L1	Q96BM0	104 aa		10.05	□□□□□ -0.8
SUN1-233	ENST00000488628	CHCHD1	Q96BP2	118 aa	Known RBP	10.05	□□□□□ -0.8
SUN1-233	ENST00000488628	CRYGA	P11844	174 aa		10.04	□□□□□ -0.8
SUN1-233	ENST00000488628	PRLH	P81277	87 aa		10.04	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 427.2 ms