RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 COX6CP09669 75 aa10.94□□□□□ -0.66
RAPGEF3-211ENST00000488250 C6orf226Q5I0X4 101 aa10.94□□□□□ -0.66
RAPGEF3-211ENST00000488250 LYPD5Q6UWN5 251 aa10.94□□□□□ -0.66
RAPGEF3-211ENST00000488250 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
RAPGEF3-211ENST00000488250 Q8N3U1 123 aa10.93□□□□□ -0.66
RAPGEF3-211ENST00000488250 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
RAPGEF3-211ENST00000488250 COX7A2LO14548 114 aa10.92□□□□□ -0.66
RAPGEF3-211ENST00000488250 LINC01600Q96MT4 127 aa10.92□□□□□ -0.66
RAPGEF3-211ENST00000488250 PRR34Q9NV39 138 aa10.92□□□□□ -0.66
RAPGEF3-211ENST00000488250 VPS25Q9BRG1 176 aa10.92□□□□□ -0.66
RAPGEF3-211ENST00000488250 J3QR89 54 aa10.91□□□□□ -0.66
RAPGEF3-211ENST00000488250 LINC00158P58513 81 aa10.91□□□□□ -0.66
RAPGEF3-211ENST00000488250 DNAH3Q8TD57 4116 aa10.91□□□□□ -0.66
RAPGEF3-211ENST00000488250 CXCL5P42830 114 aa10.9□□□□□ -0.67
RAPGEF3-211ENST00000488250 FOXI1Q12951 378 aa10.9□□□□□ -0.67
RAPGEF3-211ENST00000488250 KIAA0087Q14695 138 aa10.9□□□□□ -0.67
RAPGEF3-211ENST00000488250 LINC01620Q4KN68 170 aa10.9□□□□□ -0.67
RAPGEF3-211ENST00000488250 KPRPQ5T749 579 aaPredicted RBP10.9□□□□□ -0.67
RAPGEF3-211ENST00000488250 Q6ZTC4 211 aa10.9□□□□□ -0.67
RAPGEF3-211ENST00000488250 TEN1Q86WV5 123 aa10.89□□□□□ -0.67
RAPGEF3-211ENST00000488250 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
RAPGEF3-211ENST00000488250 C9JAW5 83 aa10.88□□□□□ -0.67
RAPGEF3-211ENST00000488250 SLC25A20O43772 301 aa10.88□□□□□ -0.67
RAPGEF3-211ENST00000488250 IGLV10-54A0A075B6I4 117 aa10.88□□□□□ -0.67
RAPGEF3-211ENST00000488250 CCL18P55774 89 aa10.88□□□□□ -0.67
RAPGEF3-211ENST00000488250 SND1-IT1Q9HBX3 110 aa10.88□□□□□ -0.67
RAPGEF3-211ENST00000488250 A0A0J9YWU9 116 aa10.87□□□□□ -0.67
RAPGEF3-211ENST00000488250 LST1O00453 97 aa10.87□□□□□ -0.67
RAPGEF3-211ENST00000488250 MDFIQ99750 246 aa10.87□□□□□ -0.67
RAPGEF3-211ENST00000488250 MALP21145 153 aa10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 CKS1BP61024 79 aa10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 PFN2P35080 140 aa10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 COX17Q14061 63 aa10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 KLK12Q9UKR0 248 aa10.86□□□□□ -0.67
RAPGEF3-211ENST00000488250 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
RAPGEF3-211ENST00000488250 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
RAPGEF3-211ENST00000488250 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
RAPGEF3-211ENST00000488250 ENHOQ6UWT2 76 aa10.85□□□□□ -0.67
RAPGEF3-211ENST00000488250 C2orf82Q6UX34 121 aa10.85□□□□□ -0.67
RAPGEF3-211ENST00000488250 PPDPFLQ8WWR9 84 aa10.85□□□□□ -0.67
RAPGEF3-211ENST00000488250 TRAV8-4A0A0B4J246 113 aa10.84□□□□□ -0.67
RAPGEF3-211ENST00000488250 CRPP02741 224 aa10.84□□□□□ -0.67
RAPGEF3-211ENST00000488250 ANKRD29Q8N6D5 301 aa10.84□□□□□ -0.67
RAPGEF3-211ENST00000488250 C11orf45Q8TAV5 145 aa10.84□□□□□ -0.67
RAPGEF3-211ENST00000488250 GAGE12HA6NDE8 117 aa10.84□□□□□ -0.67
RAPGEF3-211ENST00000488250 CLEC2BQ92478 149 aa10.84□□□□□ -0.67
RAPGEF3-211ENST00000488250 LINC00337Q8N6G1 96 aa10.83□□□□□ -0.68
RAPGEF3-211ENST00000488250 RPL28P46779 137 aaKnown RBP10.82□□□□□ -0.68
RAPGEF3-211ENST00000488250 NANOS2P60321 138 aaKnown RBP10.82□□□□□ -0.68
RAPGEF3-211ENST00000488250 DEFB131BA0A096LNP1 70 aa10.82□□□□□ -0.68
RAPGEF3-211ENST00000488250 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
RAPGEF3-211ENST00000488250 SPATA25Q9BR10 227 aa10.82□□□□□ -0.68
RAPGEF3-211ENST00000488250 H3BT86 120 aa10.81□□□□□ -0.68
RAPGEF3-211ENST00000488250 KRTAP21-3Q3LHN1 58 aa10.81□□□□□ -0.68
RAPGEF3-211ENST00000488250 WFDC10BQ8IUB3 73 aa10.81□□□□□ -0.68
RAPGEF3-211ENST00000488250 TENM3Q9P273 2699 aa10.8□□□□□ -0.68
RAPGEF3-211ENST00000488250 MUC7Q8TAX7 377 aa10.8□□□□□ -0.68
RAPGEF3-211ENST00000488250 TM2D3Q9BRN9 247 aa10.8□□□□□ -0.68
RAPGEF3-211ENST00000488250 ESRGQ1W209 222 aa10.8□□□□□ -0.68
RAPGEF3-211ENST00000488250 NBEAL1Q6ZS30 2694 aa10.79□□□□□ -0.68
RAPGEF3-211ENST00000488250 SPAG11BQ08648 103 aa10.79□□□□□ -0.68
RAPGEF3-211ENST00000488250 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
RAPGEF3-211ENST00000488250 MGAM2Q2M2H8 2515 aa10.78□□□□□ -0.68
RAPGEF3-211ENST00000488250 K7EIL1 84 aa10.78□□□□□ -0.68
RAPGEF3-211ENST00000488250 NDUFC2O95298 119 aa10.77□□□□□ -0.69
RAPGEF3-211ENST00000488250 TRACP01848 142 aa10.77□□□□□ -0.69
RAPGEF3-211ENST00000488250 NOTCH1P46531 2555 aa10.76□□□□□ -0.69
RAPGEF3-211ENST00000488250 GVQW2A0A096LPI5 108 aaPredicted RBP10.76□□□□□ -0.69
RAPGEF3-211ENST00000488250 LINC01556Q5JQF7 62 aa10.76□□□□□ -0.69
RAPGEF3-211ENST00000488250 KRTAP26-1Q6PEX3 210 aa10.76□□□□□ -0.69
RAPGEF3-211ENST00000488250 DNHD1Q96M86 4753 aa10.76□□□□□ -0.69
RAPGEF3-211ENST00000488250 TRAV10A0A0B4J240 114 aa10.75□□□□□ -0.69
RAPGEF3-211ENST00000488250 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
RAPGEF3-211ENST00000488250 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
RAPGEF3-211ENST00000488250 PRB2P02812 416 aaPredicted RBP10.74□□□□□ -0.69
RAPGEF3-211ENST00000488250 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
RAPGEF3-211ENST00000488250 C6orf223Q8N319 242 aa10.74□□□□□ -0.69
RAPGEF3-211ENST00000488250 C9orf116Q5BN46 136 aaPredicted RBP10.73□□□□□ -0.69
RAPGEF3-211ENST00000488250 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
RAPGEF3-211ENST00000488250 C15orf53Q8NAA6 179 aa10.73□□□□□ -0.69
RAPGEF3-211ENST00000488250 H0YGX0 51 aa10.72□□□□□ -0.69
RAPGEF3-211ENST00000488250 FAM218AQ96MZ4 157 aa10.72□□□□□ -0.69
RAPGEF3-211ENST00000488250 DNAH10OSP0CZ25 163 aa10.7□□□□□ -0.7
RAPGEF3-211ENST00000488250 TEX49A0A1B0GTD5 131 aa10.7□□□□□ -0.7
RAPGEF3-211ENST00000488250 DEFB121Q5J5C9 76 aa10.7□□□□□ -0.7
RAPGEF3-211ENST00000488250 OR13C6PQ8NH95 151 aa10.7□□□□□ -0.7
RAPGEF3-211ENST00000488250 SIGMAR1Q99720 223 aa10.69□□□□□ -0.7
RAPGEF3-211ENST00000488250 CDIP1Q9H305 208 aa10.69□□□□□ -0.7
RAPGEF3-211ENST00000488250 PCP4P48539 62 aa10.68□□□□□ -0.7
RAPGEF3-211ENST00000488250 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
RAPGEF3-211ENST00000488250 MRAPQ8TCY5 172 aa10.68□□□□□ -0.7
RAPGEF3-211ENST00000488250 C6orf48Q9UBA6 75 aa10.68□□□□□ -0.7
RAPGEF3-211ENST00000488250 C1orf43Q9BWL3 253 aa10.67□□□□□ -0.7
RAPGEF3-211ENST00000488250 TMEM126AQ9H061 195 aa10.67□□□□□ -0.7
RAPGEF3-211ENST00000488250 F8WDY8 70 aa10.66□□□□□ -0.7
RAPGEF3-211ENST00000488250 ZNF561-AS1K7EIQ3 104 aa10.66□□□□□ -0.7
RAPGEF3-211ENST00000488250 PRR3P79522 188 aaKnown RBP10.66□□□□□ -0.7
RAPGEF3-211ENST00000488250 C15orf56Q8N910 161 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms