RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SMCR5Q8TEV8 140 aa1.42□□□□□ -2.18
SNRNP27-204ENST00000487029 CLEC2BQ92478 149 aa1.42□□□□□ -2.18
SNRNP27-204ENST00000487029 LENEPQ9Y5L5 61 aa1.42□□□□□ -2.18
SNRNP27-204ENST00000487029 MYOFQ9NZM1 2061 aa1.42□□□□□ -2.18
SNRNP27-204ENST00000487029 PCNX2A6NKB5 2137 aa1.42□□□□□ -2.18
SNRNP27-204ENST00000487029 IGKV1D-43A0A0B4J1Z2 117 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 CHKB-CPT1BH3BT56 60 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 J3QKU1 62 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 GNRH2O43555 120 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 MRPL33O75394 65 aaKnown RBP1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 PRM2P04554 102 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 MGPP08493 103 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 KRTAP12-1P59990 96 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 NREPQ16612 68 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 ENHOQ6UWT2 76 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 LINC00322Q6ZN03 302 aaPredicted RBP1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 SPTSSBQ8NFR3 76 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 TMEM254Q8TBM7 123 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 TMEM167AQ8TBQ9 72 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 RNASE6Q93091 150 aaKnown RBP1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 Q9BRP9 147 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 NDUFA4L2Q9NRX3 87 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 NDUFA12Q9UI09 145 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 COL4A1P02462 1669 aa1.41□□□□□ -2.18
SNRNP27-204ENST00000487029 SNRNP200O75643 2136 aaKnown RBP1.4□□□□□ -2.18
SNRNP27-204ENST00000487029 A0A087WVE0 104 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 TRBV6-8A0A0A6YYG3 113 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 IGIPA6NJ69 53 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 A8MUN3 132 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 HCG22E2RYF7 251 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 H3BRN7 92 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 NDUFA1O15239 70 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 SAA2P0DJI9 122 aaPredicted RBP1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 CD52P31358 61 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 RPL27AP46776 148 aaKnown RBP1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 ELOF1P60002 83 aaKnown RBP1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 HAMPP81172 84 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 LYPD5Q6UWN5 251 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 PATE2Q6UY27 113 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 SOSTDC1Q6X4U4 206 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 CASC2Q6XLA1 102 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 Q6ZS52 159 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 ZNF833PQ6ZTB9 187 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 WFDC5Q8TCV5 224 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 DIRC1Q969H9 104 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 PROK2Q9HC23 129 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 C14orf132Q9NPU4 83 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC00846Q9NV44 126 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC00474Q9P2X8 69 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 FAM215AQ9Y5M1 114 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 SNURFQ9Y675 71 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 MYO7BQ6PIF6 2116 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 POLEQ07864 2286 aa1.4□□□□□ -2.19
SNRNP27-204ENST00000487029 IGHV1-18A0A0C4DH31 117 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 TRBV6-5A0A0K0K1A5 114 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 hDV103S1A0JD37 113 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 DEFB108AA8MXU0 73 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 C19orf84I3L1E1 186 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 IGKV1-16P04430 117 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 CCL4P13236 92 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 RNASE4P34096 147 aaKnown RBP1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC01554Q52M75 96 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 PCOTHQ58A44 107 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 C9orf116Q5BN46 136 aaPredicted RBP1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 Q8N2B8 174 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 WFDC9Q8NEX5 89 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC00308Q8TCZ7 52 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 OBSCN-AS1Q96MR7 158 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 RETNLBQ9BQ08 111 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 LINC00467Q9BRT7 94 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 CDC42SE1Q9NRR8 79 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 MUC22E2RYF6 1773 aaPredicted RBP1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 DSCAMO60469 2012 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 CACNA1GO43497 2377 aa1.39□□□□□ -2.19
SNRNP27-204ENST00000487029 LOC110117498A0A087WWA1 95 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 TRAV22A0A0B4J277 110 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 A0A0G2JQZ4 141 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 TRBV7-4A0A0J9YYF1 115 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 E7EUB6 86 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 CLPSP04118 112 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 CRIP1P50238 77 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 RPL39P5Q59GN2 51 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 CCL4L1Q8NHW4 92 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 PRR15LQ9BU68 103 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 CYSTM1Q9H1C7 97 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 XAGE1AQ9HD64 81 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 COL4A6Q14031 1691 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 SPAG17Q6Q759 2223 aa1.38□□□□□ -2.19
SNRNP27-204ENST00000487029 IGHV3-64A0A075B6Q5 118 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 IGKV2-40A0A087WW87 121 aaPredicted RBP1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 C5orf67F2Z3F1 127 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 BUB1B-PAK6H3BSN5 160 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 NCR3O14931 201 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 IGKV2D-40P01614 121 aaPredicted RBP1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 POLR2KP53803 58 aaKnown RBP1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 WT1-ASQ06250 92 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 DEFB114Q30KQ6 69 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 DEFB110Q30KQ9 67 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 GPHB5Q86YW7 130 aa1.37□□□□□ -2.19
SNRNP27-204ENST00000487029 AMELXQ99217 191 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms