RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 COX6CP09669 75 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 Q1RN00 199 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 SH2D6Q7Z4S9 175 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 LINC01561Q8N1V8 128 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 LINC00308Q8TCZ7 52 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 PPDPFLQ8WWR9 84 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 PRO0255Q9UI72 69 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
SMARCAL1-212ENST00000486983 TRAV26-1A0A087WT03 109 aa4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 A0A087WZ39 114 aa4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 SLC25A20O43772 301 aa4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 SCGB1A1P11684 91 aa4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 KRTAP10-6P60371 365 aaPredicted RBP4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 WFDC9Q8NEX5 89 aa4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 CHCHD5Q9BSY4 110 aa4.91□□□□□ -1.62
SMARCAL1-212ENST00000486983 IGHV3OR16-9A0A0B4J2B5 98 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 TRBV10-2A0A0K0K1G8 114 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 H3BT86 120 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 DEFB130BP0DP73 79 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 DEFB130AP0DP74 79 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 MIFP14174 115 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 GAGE6Q13070 117 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 LINC01620Q4KN68 170 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 MEIG1Q5JSS6 88 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 FAM222AQ5U5X8 452 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 SPATA3Q8NHX4 192 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 COX7B2Q8TF08 81 aa4.9□□□□□ -1.63
SMARCAL1-212ENST00000486983 WNK1Q9H4A3 2382 aa4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 IGLV4-60A0A075B6I1 120 aa4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 C9JAW5 83 aa4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 LST1O00453 97 aa4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 RPL13AP40429 203 aaKnown RBP4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 MTURNQ8N3F0 131 aa4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 ANKRD29Q8N6D5 301 aa4.89□□□□□ -1.63
SMARCAL1-212ENST00000486983 JMJD1CQ15652 2540 aa4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 FBN1P35555 2871 aaKnown RBP4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 LINC00959A0A1B0GUT2 108 aa4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 IBA57-AS1B1ANH7 110 aa4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 H7C2G1 150 aa4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 Q8N9P0 234 aaPredicted RBP4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 SIGMAR1Q99720 223 aa4.88□□□□□ -1.63
SMARCAL1-212ENST00000486983 TRAV13-2A0A0B4J235 113 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 IGHV4-28A0A0C4DH34 117 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 TMEM262E9PQX1 116 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 COX7A2LO14548 114 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 ATP5G1P05496 136 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 SS18Q15532 418 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 Q8IZM0 81 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 DAND5Q8N907 189 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 Q8NAQ8 132 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 CARD19Q96LW7 228 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 VWFP04275 2813 aa4.87□□□□□ -1.63
SMARCAL1-212ENST00000486983 CXCL5P42830 114 aa4.86□□□□□ -1.63
SMARCAL1-212ENST00000486983 DAD1P61803 113 aa4.86□□□□□ -1.63
SMARCAL1-212ENST00000486983 NPC2P61916 151 aa4.86□□□□□ -1.63
SMARCAL1-212ENST00000486983 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
SMARCAL1-212ENST00000486983 KRTAP24-1Q3LI83 254 aa4.86□□□□□ -1.63
SMARCAL1-212ENST00000486983 TRACP01848 142 aa4.85□□□□□ -1.63
SMARCAL1-212ENST00000486983 CRPP02741 224 aa4.85□□□□□ -1.63
SMARCAL1-212ENST00000486983 SPART-AS1P0CW21 52 aa4.85□□□□□ -1.63
SMARCAL1-212ENST00000486983 RPL28P46779 137 aaKnown RBP4.85□□□□□ -1.63
SMARCAL1-212ENST00000486983 TENM1Q9UKZ4 2725 aa4.85□□□□□ -1.63
SMARCAL1-212ENST00000486983 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 IGHV4-30-4P0DP06 118 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 MRPL23Q16540 153 aaKnown RBP4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 DEFB121Q5J5C9 76 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 LELP1Q5T871 98 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 CD164L2Q6UWJ8 174 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 C2orf82Q6UX34 121 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 MIR7-3HGQ8N6C7 128 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 MUC7Q8TAX7 377 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 UBE2WQ96B02 151 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 TOMM7Q9P0U1 55 aa4.84□□□□□ -1.63
SMARCAL1-212ENST00000486983 DNHD1Q96M86 4753 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 IGKV3OR2-268A0A0C4DH90 116 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 H3BNG1 76 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 COX17Q14061 63 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 CLEC2BQ92478 149 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 SND1-IT1Q9HBX3 110 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 FBN3Q75N90 2809 aa4.83□□□□□ -1.64
SMARCAL1-212ENST00000486983 IGKV2-28A0A075B6P5 120 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 A0A0U1RRA0 63 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 IGKV2D-28P01615 120 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 XCL1P47992 114 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 CCL18P55774 89 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 LINC00158P58513 81 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 CELA1Q9UNI1 258 aa4.82□□□□□ -1.64
SMARCAL1-212ENST00000486983 H0YGX0 51 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 NDUFC2O95298 119 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 REG3AQ06141 175 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 EGFEM1PQ0D2K5 195 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 KIAA0087Q14695 138 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 LINC00269Q8N2A0 174 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 LINC00337Q8N6G1 96 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 KRTAP2-2Q9BYT5 123 aa4.81□□□□□ -1.64
SMARCAL1-212ENST00000486983 C11orf68Q9H3H3 251 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms