RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 MIR7-3HGQ8N6C7 128 aa12.26□□□□□ -0.45
TNXB-205ENST00000486148 DEFB130BP0DP73 79 aa12.25□□□□□ -0.45
TNXB-205ENST00000486148 DEFB130AP0DP74 79 aa12.25□□□□□ -0.45
TNXB-205ENST00000486148 FAM218AQ96MZ4 157 aa12.25□□□□□ -0.45
TNXB-205ENST00000486148 IGHV3OR16-9A0A0B4J2B5 98 aa12.25□□□□□ -0.45
TNXB-205ENST00000486148 ATOX1O00244 68 aa12.25□□□□□ -0.45
TNXB-205ENST00000486148 HILS1P60008 231 aa12.24□□□□□ -0.45
TNXB-205ENST00000486148 DPH3Q96FX2 82 aa12.24□□□□□ -0.45
TNXB-205ENST00000486148 KRTAP10-3P60369 221 aa12.24□□□□□ -0.45
TNXB-205ENST00000486148 TRACP01848 142 aa12.23□□□□□ -0.45
TNXB-205ENST00000486148 IGKV2-28A0A075B6P5 120 aa12.23□□□□□ -0.45
TNXB-205ENST00000486148 IGKV2D-28P01615 120 aa12.23□□□□□ -0.45
TNXB-205ENST00000486148 LINC00337Q8N6G1 96 aa12.23□□□□□ -0.45
TNXB-205ENST00000486148 FN1P02751 2386 aaKnown RBP12.22□□□□□ -0.45
TNXB-205ENST00000486148 LINC00158P58513 81 aa12.21□□□□□ -0.45
TNXB-205ENST00000486148 SND1-IT1Q9HBX3 110 aa12.21□□□□□ -0.45
TNXB-205ENST00000486148 A0A087WZ39 114 aa12.21□□□□□ -0.46
TNXB-205ENST00000486148 DSCR8Q96T75 97 aa12.21□□□□□ -0.46
TNXB-205ENST00000486148 UPK3BQ9BT76 320 aa12.21□□□□□ -0.46
TNXB-205ENST00000486148 RPL18AQ02543 176 aaKnown RBP12.2□□□□□ -0.46
TNXB-205ENST00000486148 SMR3AQ99954 134 aa12.2□□□□□ -0.46
TNXB-205ENST00000486148 TRAV13-2A0A0B4J235 113 aa12.2□□□□□ -0.46
TNXB-205ENST00000486148 CRPP02741 224 aa12.2□□□□□ -0.46
TNXB-205ENST00000486148 Q9HAA7 133 aa12.2□□□□□ -0.46
TNXB-205ENST00000486148 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
TNXB-205ENST00000486148 GYPEP15421 78 aa12.19□□□□□ -0.46
TNXB-205ENST00000486148 C4orf26Q17RF5 130 aa12.19□□□□□ -0.46
TNXB-205ENST00000486148 LINC00612Q8N6U2 182 aa12.19□□□□□ -0.46
TNXB-205ENST00000486148 RPL28P46779 137 aaKnown RBP12.18□□□□□ -0.46
TNXB-205ENST00000486148 CCL18P55774 89 aa12.18□□□□□ -0.46
TNXB-205ENST00000486148 TMEM258P61165 79 aa12.18□□□□□ -0.46
TNXB-205ENST00000486148 FAM222AQ5U5X8 452 aa12.18□□□□□ -0.46
TNXB-205ENST00000486148 GCN1Q92616 2671 aaKnown RBP12.18□□□□□ -0.46
TNXB-205ENST00000486148 IGKV3D-7A0A0C4DH55 119 aa12.18□□□□□ -0.46
TNXB-205ENST00000486148 PF4P02776 101 aa12.18□□□□□ -0.46
TNXB-205ENST00000486148 C9orf129Q5T035 196 aaKnown RBP12.18□□□□□ -0.46
TNXB-205ENST00000486148 A0A087WVE0 104 aa12.17□□□□□ -0.46
TNXB-205ENST00000486148 INAFM2P0DMQ5 153 aa12.17□□□□□ -0.46
TNXB-205ENST00000486148 PFN2P35080 140 aa12.17□□□□□ -0.46
TNXB-205ENST00000486148 LINC00482Q8N8I6 264 aa12.17□□□□□ -0.46
TNXB-205ENST00000486148 X6R8D5 127 aa12.17□□□□□ -0.46
TNXB-205ENST00000486148 C11orf68Q9H3H3 251 aaKnown RBP12.16□□□□□ -0.46
TNXB-205ENST00000486148 NBEAL2Q6ZNJ1 2754 aa12.16□□□□□ -0.46
TNXB-205ENST00000486148 IBA57-AS1B1ANH7 110 aa12.16□□□□□ -0.46
TNXB-205ENST00000486148 A0A096LPF7 62 aa12.15□□□□□ -0.46
TNXB-205ENST00000486148 Q5XG85 94 aa12.15□□□□□ -0.46
TNXB-205ENST00000486148 MALP21145 153 aa12.15□□□□□ -0.46
TNXB-205ENST00000486148 XCL1P47992 114 aa12.15□□□□□ -0.46
TNXB-205ENST00000486148 SERP2Q8N6R1 65 aa12.15□□□□□ -0.46
TNXB-205ENST00000486148 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
TNXB-205ENST00000486148 CLPSL2Q6UWE3 100 aa12.14□□□□□ -0.47
TNXB-205ENST00000486148 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
TNXB-205ENST00000486148 UNC79Q9P2D8 2635 aa12.14□□□□□ -0.47
TNXB-205ENST00000486148 HRCT1Q6UXD1 115 aa12.14□□□□□ -0.47
TNXB-205ENST00000486148 LINC01561Q8N1V8 128 aa12.13□□□□□ -0.47
TNXB-205ENST00000486148 HIVEP2P31629 2446 aa12.12□□□□□ -0.47
TNXB-205ENST00000486148 C6orf226Q5I0X4 101 aa12.12□□□□□ -0.47
TNXB-205ENST00000486148 C14orf132Q9NPU4 83 aa12.12□□□□□ -0.47
TNXB-205ENST00000486148 LINC00846Q9NV44 126 aa12.12□□□□□ -0.47
TNXB-205ENST00000486148 VWFP04275 2813 aa12.12□□□□□ -0.47
TNXB-205ENST00000486148 A0A087WYN8 130 aa12.12□□□□□ -0.47
TNXB-205ENST00000486148 HELZ2Q9BYK8 2649 aaKnown RBP12.11□□□□□ -0.47
TNXB-205ENST00000486148 A0A1B0GUV1 79 aa12.11□□□□□ -0.47
TNXB-205ENST00000486148 DNAL4O96015 105 aa12.11□□□□□ -0.47
TNXB-205ENST00000486148 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
TNXB-205ENST00000486148 SS18Q15532 418 aa12.1□□□□□ -0.47
TNXB-205ENST00000486148 Q6JHZ5 121 aa12.1□□□□□ -0.47
TNXB-205ENST00000486148 FASNP49327 2511 aaKnown RBP12.1□□□□□ -0.47
TNXB-205ENST00000486148 PAX4O43316 350 aa12.1□□□□□ -0.47
TNXB-205ENST00000486148 USP17L23D6RBM5 183 aa12.09□□□□□ -0.47
TNXB-205ENST00000486148 DEFB4AO15263 64 aa12.09□□□□□ -0.47
TNXB-205ENST00000486148 J3QKU1 62 aa12.07□□□□□ -0.48
TNXB-205ENST00000486148 Q8IZM0 81 aa12.06□□□□□ -0.48
TNXB-205ENST00000486148 Q8N3U1 123 aa12.06□□□□□ -0.48
TNXB-205ENST00000486148 DEFB135Q30KP9 77 aa12.05□□□□□ -0.48
TNXB-205ENST00000486148 LINC00269Q8N2A0 174 aa12.05□□□□□ -0.48
TNXB-205ENST00000486148 H0YGX0 51 aa12.04□□□□□ -0.48
TNXB-205ENST00000486148 OBSCN-AS1Q96MR7 158 aa12.04□□□□□ -0.48
TNXB-205ENST00000486148 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
TNXB-205ENST00000486148 LY6G6DO95868 133 aa12.04□□□□□ -0.48
TNXB-205ENST00000486148 LECT2O14960 151 aa12.03□□□□□ -0.48
TNXB-205ENST00000486148 IGLV10-54A0A075B6I4 117 aa12.02□□□□□ -0.49
TNXB-205ENST00000486148 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.49
TNXB-205ENST00000486148 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
TNXB-205ENST00000486148 NCR3O14931 201 aa12.01□□□□□ -0.49
TNXB-205ENST00000486148 C9orf66Q5T8R8 295 aa12.01□□□□□ -0.49
TNXB-205ENST00000486148 IGHV4-28A0A0C4DH34 117 aa12.01□□□□□ -0.49
TNXB-205ENST00000486148 SLPIP03973 132 aa12□□□□□ -0.49
TNXB-205ENST00000486148 CD164L2Q6UWJ8 174 aa12□□□□□ -0.49
TNXB-205ENST00000486148 CHCHD10Q8WYQ3 142 aaPredicted RBP12□□□□□ -0.49
TNXB-205ENST00000486148 ANGP03950 147 aaKnown RBP11.99□□□□□ -0.49
TNXB-205ENST00000486148 CELA1Q9UNI1 258 aa11.99□□□□□ -0.49
TNXB-205ENST00000486148 TENM1Q9UKZ4 2725 aa11.98□□□□□ -0.49
TNXB-205ENST00000486148 REG3AQ06141 175 aa11.98□□□□□ -0.49
TNXB-205ENST00000486148 NANOS2P60321 138 aaKnown RBP11.98□□□□□ -0.49
TNXB-205ENST00000486148 DAD1P61803 113 aa11.98□□□□□ -0.49
TNXB-205ENST00000486148 C9orf116Q5BN46 136 aaPredicted RBP11.98□□□□□ -0.49
TNXB-205ENST00000486148 WFDC9Q8NEX5 89 aa11.97□□□□□ -0.49
TNXB-205ENST00000486148 INAFM1C9JVW0 142 aa11.95□□□□□ -0.5
TNXB-205ENST00000486148 GHRHP01286 108 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms