RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 SMIM20Q8N5G0 67 aa15.65■□□□□ 0.1
CLN5-202ENST00000485938 C6orf226Q5I0X4 101 aa15.64■□□□□ 0.09
CLN5-202ENST00000485938 LY6G6DO95868 133 aa15.63■□□□□ 0.09
CLN5-202ENST00000485938 OR13C6PQ8NH95 151 aa15.63■□□□□ 0.09
CLN5-202ENST00000485938 TMEM126AQ9H061 195 aa15.63■□□□□ 0.09
CLN5-202ENST00000485938 C11orf68Q9H3H3 251 aaKnown RBP15.63■□□□□ 0.09
CLN5-202ENST00000485938 C3orf22Q8N5N4 141 aa15.62■□□□□ 0.09
CLN5-202ENST00000485938 C16orf95Q9H693 158 aa15.62■□□□□ 0.09
CLN5-202ENST00000485938 PDZD2O15018 2839 aa15.62■□□□□ 0.09
CLN5-202ENST00000485938 ITPR2Q14571 2701 aa15.62■□□□□ 0.09
CLN5-202ENST00000485938 DEFB130BP0DP73 79 aa15.62■□□□□ 0.09
CLN5-202ENST00000485938 DEFB130AP0DP74 79 aa15.62■□□□□ 0.09
CLN5-202ENST00000485938 KLK5Q9Y337 293 aaPredicted RBP15.62■□□□□ 0.09
CLN5-202ENST00000485938 J3QKU1 62 aa15.61■□□□□ 0.09
CLN5-202ENST00000485938 XCL1P47992 114 aa15.61■□□□□ 0.09
CLN5-202ENST00000485938 UQCRQO14949 82 aa15.59■□□□□ 0.09
CLN5-202ENST00000485938 HIST1H4AP62805 103 aaKnown RBP15.59■□□□□ 0.09
CLN5-202ENST00000485938 SLPIP03973 132 aa15.59■□□□□ 0.09
CLN5-202ENST00000485938 GYPEP15421 78 aa15.59■□□□□ 0.09
CLN5-202ENST00000485938 Q8IZM0 81 aa15.59■□□□□ 0.09
CLN5-202ENST00000485938 LINC00612Q8N6U2 182 aa15.59■□□□□ 0.09
CLN5-202ENST00000485938 KIR2DL5BQ8NHK3 375 aa15.59■□□□□ 0.09
CLN5-202ENST00000485938 SS18Q15532 418 aa15.58■□□□□ 0.08
CLN5-202ENST00000485938 C9orf153Q5TBE3 101 aa15.58■□□□□ 0.08
CLN5-202ENST00000485938 ACANP16112 2415 aa15.58■□□□□ 0.08
CLN5-202ENST00000485938 A0A1B0GUV1 79 aa15.57■□□□□ 0.08
CLN5-202ENST00000485938 NCR3O14931 201 aa15.57■□□□□ 0.08
CLN5-202ENST00000485938 RNASE1P07998 156 aaKnown RBP15.57■□□□□ 0.08
CLN5-202ENST00000485938 LINC00846Q9NV44 126 aa15.57■□□□□ 0.08
CLN5-202ENST00000485938 LINC00526Q96FQ7 95 aa15.56■□□□□ 0.08
CLN5-202ENST00000485938 ORMDL1Q9P0S3 153 aa15.54■□□□□ 0.08
CLN5-202ENST00000485938 Q6JHZ5 121 aa15.54■□□□□ 0.08
CLN5-202ENST00000485938 CLPSL2Q6UWE3 100 aa15.54■□□□□ 0.08
CLN5-202ENST00000485938 LINC01561Q8N1V8 128 aa15.53■□□□□ 0.08
CLN5-202ENST00000485938 KRTAP1-1Q07627 177 aa15.52■□□□□ 0.08
CLN5-202ENST00000485938 C2orf48Q96LS8 159 aa15.52■□□□□ 0.08
CLN5-202ENST00000485938 COX7CP15954 63 aa15.52■□□□□ 0.07
CLN5-202ENST00000485938 NANOS2P60321 138 aaKnown RBP15.52■□□□□ 0.07
CLN5-202ENST00000485938 LINC00167Q96N53 147 aa15.52■□□□□ 0.07
CLN5-202ENST00000485938 GCN1Q92616 2671 aaKnown RBP15.51■□□□□ 0.07
CLN5-202ENST00000485938 FN1P02751 2386 aaKnown RBP15.51■□□□□ 0.07
CLN5-202ENST00000485938 ATOX1O00244 68 aa15.51■□□□□ 0.07
CLN5-202ENST00000485938 UNC79Q9P2D8 2635 aa15.5■□□□□ 0.07
CLN5-202ENST00000485938 IGKV3D-7A0A0C4DH55 119 aa15.5■□□□□ 0.07
CLN5-202ENST00000485938 PRR3P79522 188 aaKnown RBP15.5■□□□□ 0.07
CLN5-202ENST00000485938 MTORP42345 2549 aa15.49■□□□□ 0.07
CLN5-202ENST00000485938 PRO0255Q9UI72 69 aa15.49■□□□□ 0.07
CLN5-202ENST00000485938 KIAA0087Q14695 138 aa15.48■□□□□ 0.07
CLN5-202ENST00000485938 A0A096LPF7 62 aa15.48■□□□□ 0.07
CLN5-202ENST00000485938 X6R8D5 127 aa15.48■□□□□ 0.07
CLN5-202ENST00000485938 A0A1B0GX51 115 aa15.47■□□□□ 0.07
CLN5-202ENST00000485938 RPL18AQ02543 176 aaKnown RBP15.47■□□□□ 0.07
CLN5-202ENST00000485938 NDUFC2O95298 119 aa15.46■□□□□ 0.07
CLN5-202ENST00000485938 CCKP06307 115 aa15.46■□□□□ 0.07
CLN5-202ENST00000485938 Q8N814 137 aa15.46■□□□□ 0.07
CLN5-202ENST00000485938 FASNP49327 2511 aaKnown RBP15.45■□□□□ 0.06
CLN5-202ENST00000485938 COX17Q14061 63 aa15.45■□□□□ 0.06
CLN5-202ENST00000485938 LINC00269Q8N2A0 174 aa15.45■□□□□ 0.06
CLN5-202ENST00000485938 CD164L2Q6UWJ8 174 aa15.44■□□□□ 0.06
CLN5-202ENST00000485938 HECTD1Q9ULT8 2610 aa15.44■□□□□ 0.06
CLN5-202ENST00000485938 CRYGAP11844 174 aa15.43■□□□□ 0.06
CLN5-202ENST00000485938 CFAP161Q6P656 301 aa15.42■□□□□ 0.06
CLN5-202ENST00000485938 A0A087WVE0 104 aa15.42■□□□□ 0.06
CLN5-202ENST00000485938 CHCHD10Q8WYQ3 142 aaPredicted RBP15.42■□□□□ 0.06
CLN5-202ENST00000485938 IGHV4-28A0A0C4DH34 117 aa15.41■□□□□ 0.06
CLN5-202ENST00000485938 SMIM9A6NGZ8 99 aa15.41■□□□□ 0.06
CLN5-202ENST00000485938 JMJD7-PLA2G4BH0Y9G9 81 aa15.41■□□□□ 0.06
CLN5-202ENST00000485938 ANK3Q12955 4377 aaKnown RBP15.4■□□□□ 0.06
CLN5-202ENST00000485938 TMEM256-PLSCR3K7ERE1 68 aa15.39■□□□□ 0.05
CLN5-202ENST00000485938 C9orf116Q5BN46 136 aaPredicted RBP15.39■□□□□ 0.05
CLN5-202ENST00000485938 Q8N3U1 123 aa15.39■□□□□ 0.05
CLN5-202ENST00000485938 NBEAL2Q6ZNJ1 2754 aa15.39■□□□□ 0.05
CLN5-202ENST00000485938 IGLV10-54A0A075B6I4 117 aa15.38■□□□□ 0.05
CLN5-202ENST00000485938 HILS1P60008 231 aa15.38■□□□□ 0.05
CLN5-202ENST00000485938 Q8NDZ9 215 aa15.38■□□□□ 0.05
CLN5-202ENST00000485938 KRTAP10-3P60369 221 aa15.37■□□□□ 0.05
CLN5-202ENST00000485938 REG3AQ06141 175 aa15.37■□□□□ 0.05
CLN5-202ENST00000485938 LINC00482Q8N8I6 264 aa15.37■□□□□ 0.05
CLN5-202ENST00000485938 SMR3AQ99954 134 aa15.37■□□□□ 0.05
CLN5-202ENST00000485938 ANGP03950 147 aaKnown RBP15.37■□□□□ 0.05
CLN5-202ENST00000485938 LYRM9A8MSI8 78 aa15.36■□□□□ 0.05
CLN5-202ENST00000485938 hADV29S1A0JD25 119 aa15.35■□□□□ 0.05
CLN5-202ENST00000485938 USP17L23D6RBM5 183 aa15.35■□□□□ 0.05
CLN5-202ENST00000485938 SERP2Q8N6R1 65 aa15.35■□□□□ 0.05
CLN5-202ENST00000485938 C6orf99Q4VX62 202 aa15.34■□□□□ 0.05
CLN5-202ENST00000485938 S100A7L2Q5SY68 101 aa15.34■□□□□ 0.05
CLN5-202ENST00000485938 CYSTM1Q9H1C7 97 aa15.33■□□□□ 0.05
CLN5-202ENST00000485938 NOTCH2Q04721 2471 aa15.32■□□□□ 0.04
CLN5-202ENST00000485938 DEFB4AO15263 64 aa15.31■□□□□ 0.04
CLN5-202ENST00000485938 ATP5EP2Q5VTU8 51 aa15.31■□□□□ 0.04
CLN5-202ENST00000485938 LINC00575Q6W349 94 aa15.31■□□□□ 0.04
CLN5-202ENST00000485938 UPK3BQ9BT76 320 aa15.31■□□□□ 0.04
CLN5-202ENST00000485938 C10orf25Q5T742 122 aa15.29■□□□□ 0.04
CLN5-202ENST00000485938 LYPD5Q6UWN5 251 aa15.28■□□□□ 0.04
CLN5-202ENST00000485938 DEFB135Q30KP9 77 aa15.28■□□□□ 0.04
CLN5-202ENST00000485938 UNQ6190/PRO20217Q6UXQ8 127 aa15.27■□□□□ 0.04
CLN5-202ENST00000485938 C6orf223Q8N319 242 aa15.27■□□□□ 0.04
CLN5-202ENST00000485938 DAD1P61803 113 aa15.25■□□□□ 0.03
CLN5-202ENST00000485938 SPAG11BQ08648 103 aa15.25■□□□□ 0.03
CLN5-202ENST00000485938 WFDC9Q8NEX5 89 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms