RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 TOMM6Q96B49 74 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 TMEM141Q96I45 108 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 AMELXQ99217 191 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SMARCD3-211ENST00000485592 IGHV3OR16-9A0A0B4J2B5 98 aa8.26□□□□□ -1.09
SMARCD3-211ENST00000485592 IFITM10A6NMD0 228 aa8.26□□□□□ -1.09
SMARCD3-211ENST00000485592 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
SMARCD3-211ENST00000485592 C10orf25Q5T742 122 aa8.26□□□□□ -1.09
SMARCD3-211ENST00000485592 UNQ6190/PRO20217Q6UXQ8 127 aa8.26□□□□□ -1.09
SMARCD3-211ENST00000485592 C6orf48Q9UBA6 75 aa8.26□□□□□ -1.09
SMARCD3-211ENST00000485592 NPSP0C0P6 89 aa8.25□□□□□ -1.09
SMARCD3-211ENST00000485592 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
SMARCD3-211ENST00000485592 TIMM17AQ99595 171 aa8.25□□□□□ -1.09
SMARCD3-211ENST00000485592 TEX43Q6ZNM6 134 aa8.24□□□□□ -1.09
SMARCD3-211ENST00000485592 COLCA2A8K830 154 aa8.23□□□□□ -1.09
SMARCD3-211ENST00000485592 FA2HQ7L5A8 372 aa8.23□□□□□ -1.09
SMARCD3-211ENST00000485592 TRBV30A0A0K0K1B3 111 aa8.22□□□□□ -1.09
SMARCD3-211ENST00000485592 SCO1O75880 301 aa8.22□□□□□ -1.09
SMARCD3-211ENST00000485592 ERASQ7Z444 233 aa8.22□□□□□ -1.09
SMARCD3-211ENST00000485592 FAM19A3Q7Z5A8 133 aa8.22□□□□□ -1.09
SMARCD3-211ENST00000485592 PACRGQ96M98 296 aaPredicted RBP8.22□□□□□ -1.09
SMARCD3-211ENST00000485592 NDUFC2-KCTD14E9PQ53 114 aa8.21□□□□□ -1.1
SMARCD3-211ENST00000485592 PMCHL1Q16048 86 aa8.21□□□□□ -1.1
SMARCD3-211ENST00000485592 Q6ZN92 141 aa8.21□□□□□ -1.1
SMARCD3-211ENST00000485592 KRTAP7-1Q8IUC3 87 aa8.21□□□□□ -1.1
SMARCD3-211ENST00000485592 TRGC2P03986 189 aa8.2□□□□□ -1.1
SMARCD3-211ENST00000485592 LINC00614P0C842 121 aa8.2□□□□□ -1.1
SMARCD3-211ENST00000485592 G0S2P27469 103 aa8.2□□□□□ -1.1
SMARCD3-211ENST00000485592 SCGB3A1Q96QR1 104 aa8.2□□□□□ -1.1
SMARCD3-211ENST00000485592 VCX2Q9H322 139 aa8.2□□□□□ -1.1
SMARCD3-211ENST00000485592 ZNF861PO60384 105 aa8.19□□□□□ -1.1
SMARCD3-211ENST00000485592 LINC00310P59036 64 aa8.19□□□□□ -1.1
SMARCD3-211ENST00000485592 KIAA0087Q14695 138 aa8.19□□□□□ -1.1
SMARCD3-211ENST00000485592 PDZD11Q5EBL8 140 aa8.19□□□□□ -1.1
SMARCD3-211ENST00000485592 C2orf88Q9BSF0 95 aa8.19□□□□□ -1.1
SMARCD3-211ENST00000485592 KRTAP9-2Q9BYQ4 174 aa8.19□□□□□ -1.1
SMARCD3-211ENST00000485592 NUPR1O60356 82 aa8.18□□□□□ -1.1
SMARCD3-211ENST00000485592 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
SMARCD3-211ENST00000485592 C2orf82Q6UX34 121 aa8.18□□□□□ -1.1
SMARCD3-211ENST00000485592 MUC2Q02817 5179 aa8.17□□□□□ -1.1
SMARCD3-211ENST00000485592 LINC01549A6NIU2 74 aa8.17□□□□□ -1.1
SMARCD3-211ENST00000485592 TSPAN13O95857 204 aa8.17□□□□□ -1.1
SMARCD3-211ENST00000485592 HBDP02042 147 aa8.17□□□□□ -1.1
SMARCD3-211ENST00000485592 PAPPA-AS1Q5QFB9 102 aa8.17□□□□□ -1.1
SMARCD3-211ENST00000485592 CST9LQ9H4G1 147 aa8.17□□□□□ -1.1
SMARCD3-211ENST00000485592 CDKN2A-AS1Q9UH64 79 aa8.16□□□□□ -1.1
SMARCD3-211ENST00000485592 IGLV5-45A0A087WSX0 123 aa8.15□□□□□ -1.1
SMARCD3-211ENST00000485592 PRSS2P07478 247 aa8.15□□□□□ -1.1
SMARCD3-211ENST00000485592 RAB5BP61020 215 aa8.15□□□□□ -1.1
SMARCD3-211ENST00000485592 LINC01561Q8N1V8 128 aa8.15□□□□□ -1.1
SMARCD3-211ENST00000485592 CHCHD1Q96BP2 118 aaKnown RBP8.15□□□□□ -1.1
SMARCD3-211ENST00000485592 CKS1BP61024 79 aa8.14□□□□□ -1.11
SMARCD3-211ENST00000485592 HERVK_113P63121 156 aa8.14□□□□□ -1.11
SMARCD3-211ENST00000485592 PMVKQ15126 192 aa8.14□□□□□ -1.11
SMARCD3-211ENST00000485592 LBHQ53QV2 105 aaPredicted RBP8.14□□□□□ -1.11
SMARCD3-211ENST00000485592 C22orf24Q9Y442 160 aa8.14□□□□□ -1.11
SMARCD3-211ENST00000485592 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
SMARCD3-211ENST00000485592 TOMM7Q9P0U1 55 aa8.13□□□□□ -1.11
SMARCD3-211ENST00000485592 SERF1AO75920 110 aa8.12□□□□□ -1.11
SMARCD3-211ENST00000485592 RPL28P46779 137 aaKnown RBP8.12□□□□□ -1.11
SMARCD3-211ENST00000485592 SEC11AP67812 179 aa8.12□□□□□ -1.11
SMARCD3-211ENST00000485592 LINC00469Q8N7U9 141 aa8.12□□□□□ -1.11
SMARCD3-211ENST00000485592 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
SMARCD3-211ENST00000485592 SMIM1B2RUZ4 78 aa8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 IGLC3P0DOY3 106 aa8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 CRYGAP11844 174 aa8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 C6orf226Q5I0X4 101 aa8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 BAGE3Q86Y29 109 aa8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 FAM19A2Q8N3H0 131 aa8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 GEMIN7Q9H840 131 aaKnown RBP8.11□□□□□ -1.11
SMARCD3-211ENST00000485592 A0A087X002 238 aa8.1□□□□□ -1.11
SMARCD3-211ENST00000485592 ATP5LO75964 103 aa8.1□□□□□ -1.11
SMARCD3-211ENST00000485592 MRPL55Q7Z7F7 128 aaKnown RBP8.1□□□□□ -1.11
SMARCD3-211ENST00000485592 Q8IZM0 81 aa8.1□□□□□ -1.11
SMARCD3-211ENST00000485592 XAGE1AQ9HD64 81 aa8.1□□□□□ -1.11
SMARCD3-211ENST00000485592 TP73-AS1Q9UF72 201 aa8.1□□□□□ -1.11
SMARCD3-211ENST00000485592 BCE1O60756 84 aa8.09□□□□□ -1.11
SMARCD3-211ENST00000485592 HIST1H2BKO60814 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 ATP6V1G1O75348 118 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HSBP1O75506 76 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BJP06899 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 ZNF22P17026 224 aaPredicted RBP8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BOP23527 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BBP33778 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BDP58876 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BCP62807 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST2H2BEQ16778 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 LCE2AQ5TA79 106 aaPredicted RBP8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BHQ93079 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BNQ99877 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 HIST1H2BMQ99879 126 aa8.08□□□□□ -1.12
SMARCD3-211ENST00000485592 C11orf86A6NJI1 115 aa8.07□□□□□ -1.12
SMARCD3-211ENST00000485592 NDUFA6P56556 154 aa8.07□□□□□ -1.12
SMARCD3-211ENST00000485592 IFI27L1Q96BM0 104 aa8.07□□□□□ -1.12
SMARCD3-211ENST00000485592 TRAV12-1A0A0B4J245 112 aa8.06□□□□□ -1.12
SMARCD3-211ENST00000485592 IGLV5-39A0A0G2JS06 123 aa8.06□□□□□ -1.12
SMARCD3-211ENST00000485592 F8VRH5 84 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms