RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 GEMIN7Q9H840 131 aaKnown RBP17.25■□□□□ 0.35
HLA-C-207ENST00000484378 UQCC3Q6UW78 93 aa17.24■□□□□ 0.35
HLA-C-207ENST00000484378 CDKN2A-AS1Q9UH64 79 aa17.24■□□□□ 0.35
HLA-C-207ENST00000484378 TRAV9-1A0A075B6T8 112 aa17.23■□□□□ 0.35
HLA-C-207ENST00000484378 TMEM218A2RU14 115 aa17.22■□□□□ 0.35
HLA-C-207ENST00000484378 LINC00469Q8N7U9 141 aa17.21■□□□□ 0.35
HLA-C-207ENST00000484378 PRR26Q8N8Z3 221 aa17.2■□□□□ 0.34
HLA-C-207ENST00000484378 SCGB3A1Q96QR1 104 aa17.2■□□□□ 0.34
HLA-C-207ENST00000484378 ERASQ7Z444 233 aa17.19■□□□□ 0.34
HLA-C-207ENST00000484378 F8VRH5 84 aa17.18■□□□□ 0.34
HLA-C-207ENST00000484378 S100PP25815 95 aa17.18■□□□□ 0.34
HLA-C-207ENST00000484378 XAGE1AQ9HD64 81 aa17.17■□□□□ 0.34
HLA-C-207ENST00000484378 GNB1LQ9BYB4 327 aa17.15■□□□□ 0.34
HLA-C-207ENST00000484378 CXCL5P42830 114 aa17.14■□□□□ 0.33
HLA-C-207ENST00000484378 SEC11CQ9BY50 192 aa17.14■□□□□ 0.33
HLA-C-207ENST00000484378 RNF213Q63HN8 5207 aa17.13■□□□□ 0.33
HLA-C-207ENST00000484378 LINC01549A6NIU2 74 aa17.12■□□□□ 0.33
HLA-C-207ENST00000484378 SMIM1B2RUZ4 78 aa17.12■□□□□ 0.33
HLA-C-207ENST00000484378 IFITM2Q01629 132 aa17.12■□□□□ 0.33
HLA-C-207ENST00000484378 C22orf24Q9Y442 160 aa17.12■□□□□ 0.33
HLA-C-207ENST00000484378 TINCRA0A1B0GVN0 87 aa17.11■□□□□ 0.33
HLA-C-207ENST00000484378 IGLV1-50A0A075B6I6 118 aa17.1■□□□□ 0.33
HLA-C-207ENST00000484378 KRTAP1-4P0C5Y4 121 aa17.1■□□□□ 0.33
HLA-C-207ENST00000484378 LBHQ53QV2 105 aaPredicted RBP17.1■□□□□ 0.33
HLA-C-207ENST00000484378 LINC01546A6NGU7 62 aa17.09■□□□□ 0.33
HLA-C-207ENST00000484378 PDZD11Q5EBL8 140 aa17.09■□□□□ 0.33
HLA-C-207ENST00000484378 COX19Q49B96 90 aa17.08■□□□□ 0.32
HLA-C-207ENST00000484378 FA2HQ7L5A8 372 aa17.08■□□□□ 0.32
HLA-C-207ENST00000484378 COX7B2Q8TF08 81 aa17.08■□□□□ 0.32
HLA-C-207ENST00000484378 IGLV5-45A0A087WSX0 123 aa17.07■□□□□ 0.32
HLA-C-207ENST00000484378 CST9LQ9H4G1 147 aa17.07■□□□□ 0.32
HLA-C-207ENST00000484378 SMCO4Q9NRQ5 59 aa17.07■□□□□ 0.32
HLA-C-207ENST00000484378 NUPR1O60356 82 aa17.06■□□□□ 0.32
HLA-C-207ENST00000484378 MRPL18Q9H0U6 180 aaKnown RBP17.06■□□□□ 0.32
HLA-C-207ENST00000484378 ZNF861PO60384 105 aa17.05■□□□□ 0.32
HLA-C-207ENST00000484378 FABP9Q0Z7S8 132 aa17.05■□□□□ 0.32
HLA-C-207ENST00000484378 COMMD7Q86VX2 200 aa17.05■□□□□ 0.32
HLA-C-207ENST00000484378 TP73-AS1Q9UF72 201 aa17.05■□□□□ 0.32
HLA-C-207ENST00000484378 PMVKQ15126 192 aa17.04■□□□□ 0.32
HLA-C-207ENST00000484378 MRPL55Q7Z7F7 128 aaKnown RBP17.04■□□□□ 0.32
HLA-C-207ENST00000484378 SPINK8P0C7L1 97 aa17.03■□□□□ 0.32
HLA-C-207ENST00000484378 RPL13AP40429 203 aaKnown RBP17.02■□□□□ 0.32
HLA-C-207ENST00000484378 RHEBQ15382 184 aa17■□□□□ 0.31
HLA-C-207ENST00000484378 RPS10P5Q9NQ39 176 aa17■□□□□ 0.31
HLA-C-207ENST00000484378 H3BRM9 83 aa16.98■□□□□ 0.31
HLA-C-207ENST00000484378 RAB5BP61020 215 aa16.97■□□□□ 0.31
HLA-C-207ENST00000484378 C10orf91Q5T1B1 145 aa16.96■□□□□ 0.31
HLA-C-207ENST00000484378 CARHSP1Q9Y2V2 147 aaKnown RBP16.96■□□□□ 0.31
HLA-C-207ENST00000484378 BCE1O60756 84 aa16.95■□□□□ 0.3
HLA-C-207ENST00000484378 RPL28P46779 137 aaKnown RBP16.95■□□□□ 0.3
HLA-C-207ENST00000484378 RPL37AP8A6NKH3 93 aa16.94■□□□□ 0.3
HLA-C-207ENST00000484378 ATP5LO75964 103 aa16.94■□□□□ 0.3
HLA-C-207ENST00000484378 LINC00167Q96N53 147 aa16.94■□□□□ 0.3
HLA-C-207ENST00000484378 LPAP08519 4548 aa16.93■□□□□ 0.3
HLA-C-207ENST00000484378 GAGE10A6NGK3 116 aa16.93■□□□□ 0.3
HLA-C-207ENST00000484378 NDUFA6P56556 154 aa16.93■□□□□ 0.3
HLA-C-207ENST00000484378 IGLC3P0DOY3 106 aa16.92■□□□□ 0.3
HLA-C-207ENST00000484378 NKAPP1Q8N9T2 125 aa16.91■□□□□ 0.3
HLA-C-207ENST00000484378 A0A096LNJ9 63 aa16.9■□□□□ 0.3
HLA-C-207ENST00000484378 IGLV5-37A0A075B6J1 123 aa16.89■□□□□ 0.29
HLA-C-207ENST00000484378 C18orf32Q8TCD1 76 aa16.89■□□□□ 0.29
HLA-C-207ENST00000484378 TRAPPC1Q9Y5R8 145 aa16.89■□□□□ 0.29
HLA-C-207ENST00000484378 IGLV5-39A0A0G2JS06 123 aa16.87■□□□□ 0.29
HLA-C-207ENST00000484378 HBDP02042 147 aa16.87■□□□□ 0.29
HLA-C-207ENST00000484378 LINC00614P0C842 121 aa16.87■□□□□ 0.29
HLA-C-207ENST00000484378 URB1-AS1Q96HZ7 61 aa16.87■□□□□ 0.29
HLA-C-207ENST00000484378 ZNF22P17026 224 aaPredicted RBP16.86■□□□□ 0.29
HLA-C-207ENST00000484378 PFN2P35080 140 aa16.86■□□□□ 0.29
HLA-C-207ENST00000484378 PMCHL1Q16048 86 aa16.85■□□□□ 0.29
HLA-C-207ENST00000484378 PRR4Q16378 134 aa16.83■□□□□ 0.28
HLA-C-207ENST00000484378 UBE2AP49459 152 aa16.82■□□□□ 0.28
HLA-C-207ENST00000484378 A0A087X002 238 aa16.81■□□□□ 0.28
HLA-C-207ENST00000484378 ERG28Q9UKR5 140 aa16.81■□□□□ 0.28
HLA-C-207ENST00000484378 IGKV2-28A0A075B6P5 120 aa16.8■□□□□ 0.28
HLA-C-207ENST00000484378 SCO1O75880 301 aa16.8■□□□□ 0.28
HLA-C-207ENST00000484378 IGKV2D-28P01615 120 aa16.8■□□□□ 0.28
HLA-C-207ENST00000484378 CRYGAP11844 174 aa16.79■□□□□ 0.28
HLA-C-207ENST00000484378 APOC3P02656 99 aa16.78■□□□□ 0.28
HLA-C-207ENST00000484378 BAGE3Q86Y29 109 aa16.78■□□□□ 0.28
HLA-C-207ENST00000484378 SND1-IT1Q9HBX3 110 aa16.78■□□□□ 0.28
HLA-C-207ENST00000484378 C11orf86A6NJI1 115 aa16.77■□□□□ 0.28
HLA-C-207ENST00000484378 TMEM170BQ5T4T1 132 aa16.77■□□□□ 0.28
HLA-C-207ENST00000484378 KRTAP13-1Q8IUC0 172 aa16.77■□□□□ 0.28
HLA-C-207ENST00000484378 TYMSOSQ8TAI1 123 aa16.77■□□□□ 0.28
HLA-C-207ENST00000484378 ZNF625Q96I27 306 aaPredicted RBP16.77■□□□□ 0.28
HLA-C-207ENST00000484378 TSPAN13O95857 204 aa16.76■□□□□ 0.27
HLA-C-207ENST00000484378 VPREB1P12018 145 aa16.75■□□□□ 0.27
HLA-C-207ENST00000484378 COX17Q14061 63 aa16.75■□□□□ 0.27
HLA-C-207ENST00000484378 SNAPINO95295 136 aa16.74■□□□□ 0.27
HLA-C-207ENST00000484378 NDUFA5Q16718 116 aa16.74■□□□□ 0.27
HLA-C-207ENST00000484378 SFTA2Q6UW10 78 aa16.74■□□□□ 0.27
HLA-C-207ENST00000484378 RPL24P83731 157 aaKnown RBP16.73■□□□□ 0.27
HLA-C-207ENST00000484378 SVBPQ8N300 66 aa16.73■□□□□ 0.27
HLA-C-207ENST00000484378 ANAPC11Q9NYG5 84 aa16.73■□□□□ 0.27
HLA-C-207ENST00000484378 CHTOPQ9Y3Y2 248 aaKnown RBP16.7■□□□□ 0.26
HLA-C-207ENST00000484378 PRLHP81277 87 aa16.69■□□□□ 0.26
HLA-C-207ENST00000484378 TMEM126AQ9H061 195 aa16.69■□□□□ 0.26
HLA-C-207ENST00000484378 TMEM238C9JI98 176 aa16.68■□□□□ 0.26
HLA-C-207ENST00000484378 FAM19A1Q7Z5A9 133 aa16.68■□□□□ 0.26
HLA-C-207ENST00000484378 FAM229BQ4G0N7 80 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms