RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 LINC01549A6NIU2 74 aa8.35□□□□□ -1.07
VARS-226ENST00000483275 NPSP0C0P6 89 aa8.35□□□□□ -1.07
VARS-226ENST00000483275 UBE2BP63146 152 aa8.35□□□□□ -1.07
VARS-226ENST00000483275 C2orf82Q6UX34 121 aa8.35□□□□□ -1.07
VARS-226ENST00000483275 VCX2Q9H322 139 aa8.35□□□□□ -1.07
VARS-226ENST00000483275 TLX1NBP0CAT3 122 aa8.33□□□□□ -1.08
VARS-226ENST00000483275 UBE2D1P51668 147 aa8.33□□□□□ -1.08
VARS-226ENST00000483275 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
VARS-226ENST00000483275 TOMM6Q96B49 74 aa8.33□□□□□ -1.08
VARS-226ENST00000483275 IGLV1-50A0A075B6I6 118 aa8.32□□□□□ -1.08
VARS-226ENST00000483275 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
VARS-226ENST00000483275 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
VARS-226ENST00000483275 ZC2HC1BQ5TFG8 222 aa8.32□□□□□ -1.08
VARS-226ENST00000483275 SCGB3A1Q96QR1 104 aa8.32□□□□□ -1.08
VARS-226ENST00000483275 TIMM17AQ99595 171 aa8.32□□□□□ -1.08
VARS-226ENST00000483275 ERASQ7Z444 233 aa8.31□□□□□ -1.08
VARS-226ENST00000483275 IGIPA6NJ69 53 aa8.3□□□□□ -1.08
VARS-226ENST00000483275 RAB5BP61020 215 aa8.3□□□□□ -1.08
VARS-226ENST00000483275 SEC11AP67812 179 aa8.3□□□□□ -1.08
VARS-226ENST00000483275 LINC00242Q5T6M2 205 aa8.3□□□□□ -1.08
VARS-226ENST00000483275 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
VARS-226ENST00000483275 AMELXQ99217 191 aa8.3□□□□□ -1.08
VARS-226ENST00000483275 LINC01546A6NGU7 62 aa8.29□□□□□ -1.08
VARS-226ENST00000483275 F8WDY8 70 aa8.29□□□□□ -1.08
VARS-226ENST00000483275 TSPAN13O95857 204 aa8.29□□□□□ -1.08
VARS-226ENST00000483275 CBLN2Q8IUK8 224 aa8.29□□□□□ -1.08
VARS-226ENST00000483275 NDUFC2-KCTD14E9PQ53 114 aa8.28□□□□□ -1.08
VARS-226ENST00000483275 LINC00614P0C842 121 aa8.28□□□□□ -1.08
VARS-226ENST00000483275 C18orf32Q8TCD1 76 aa8.28□□□□□ -1.08
VARS-226ENST00000483275 GEMIN7Q9H840 131 aaKnown RBP8.28□□□□□ -1.08
VARS-226ENST00000483275 HERVK_113P63121 156 aa8.27□□□□□ -1.09
VARS-226ENST00000483275 LINC00173Q6ZV60 143 aa8.27□□□□□ -1.09
VARS-226ENST00000483275 TRBV30A0A0K0K1B3 111 aa8.26□□□□□ -1.09
VARS-226ENST00000483275 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
VARS-226ENST00000483275 PACRGQ96M98 296 aaPredicted RBP8.26□□□□□ -1.09
VARS-226ENST00000483275 YPEL4Q96NS1 127 aa8.26□□□□□ -1.09
VARS-226ENST00000483275 XAGE1AQ9HD64 81 aa8.26□□□□□ -1.09
VARS-226ENST00000483275 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
VARS-226ENST00000483275 HBDP02042 147 aa8.25□□□□□ -1.09
VARS-226ENST00000483275 PRSS2P07478 247 aa8.25□□□□□ -1.09
VARS-226ENST00000483275 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
VARS-226ENST00000483275 FAM19A3Q7Z5A8 133 aa8.25□□□□□ -1.09
VARS-226ENST00000483275 A0A087X002 238 aa8.24□□□□□ -1.09
VARS-226ENST00000483275 NDUFA6P56556 154 aa8.24□□□□□ -1.09
VARS-226ENST00000483275 PMVKQ15126 192 aa8.24□□□□□ -1.09
VARS-226ENST00000483275 ZNF861PO60384 105 aa8.23□□□□□ -1.09
VARS-226ENST00000483275 TINCRA0A1B0GVN0 87 aa8.22□□□□□ -1.09
VARS-226ENST00000483275 PMCHL1Q16048 86 aa8.22□□□□□ -1.09
VARS-226ENST00000483275 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
VARS-226ENST00000483275 CHCHD1Q96BP2 118 aaKnown RBP8.22□□□□□ -1.09
VARS-226ENST00000483275 URB1-AS1Q96HZ7 61 aa8.22□□□□□ -1.09
VARS-226ENST00000483275 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
VARS-226ENST00000483275 C22orf24Q9Y442 160 aa8.22□□□□□ -1.09
VARS-226ENST00000483275 ATP5LO75964 103 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 TRGC2P03986 189 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 CKS1BP61024 79 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 C6orf226Q5I0X4 101 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 ANAPC11Q9NYG5 84 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 CDKN2A-AS1Q9UH64 79 aa8.21□□□□□ -1.1
VARS-226ENST00000483275 A0A096LNJ9 63 aa8.19□□□□□ -1.1
VARS-226ENST00000483275 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
VARS-226ENST00000483275 H3BRM9 83 aa8.19□□□□□ -1.1
VARS-226ENST00000483275 HSBP1O75506 76 aa8.19□□□□□ -1.1
VARS-226ENST00000483275 Q8IZM0 81 aa8.19□□□□□ -1.1
VARS-226ENST00000483275 GAGE10A6NGK3 116 aa8.18□□□□□ -1.1
VARS-226ENST00000483275 RPL37AP8A6NKH3 93 aa8.18□□□□□ -1.1
VARS-226ENST00000483275 PDZD11Q5EBL8 140 aa8.18□□□□□ -1.1
VARS-226ENST00000483275 RETNLBQ9BQ08 111 aa8.18□□□□□ -1.1
VARS-226ENST00000483275 NUPR1O60356 82 aa8.17□□□□□ -1.1
VARS-226ENST00000483275 CXCL5P42830 114 aa8.17□□□□□ -1.1
VARS-226ENST00000483275 MRPL55Q7Z7F7 128 aaKnown RBP8.17□□□□□ -1.1
VARS-226ENST00000483275 IGLV5-45A0A087WSX0 123 aa8.16□□□□□ -1.1
VARS-226ENST00000483275 COLCA2A8K830 154 aa8.16□□□□□ -1.1
VARS-226ENST00000483275 BCE1O60756 84 aa8.16□□□□□ -1.1
VARS-226ENST00000483275 LBHQ53QV2 105 aaPredicted RBP8.16□□□□□ -1.1
VARS-226ENST00000483275 TYMSOSQ8TAI1 123 aa8.16□□□□□ -1.1
VARS-226ENST00000483275 SMIM1B2RUZ4 78 aa8.15□□□□□ -1.1
VARS-226ENST00000483275 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
VARS-226ENST00000483275 IGLC3P0DOY3 106 aa8.15□□□□□ -1.1
VARS-226ENST00000483275 RPL28P46779 137 aaKnown RBP8.15□□□□□ -1.1
VARS-226ENST00000483275 COX7B2Q8TF08 81 aa8.15□□□□□ -1.1
VARS-226ENST00000483275 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 F8VRH5 84 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 SCO1O75880 301 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 CRYGAP11844 174 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 KRTAP13-2Q52LG2 175 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 IFI27L1Q96BM0 104 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 LINC00167Q96N53 147 aa8.14□□□□□ -1.11
VARS-226ENST00000483275 CHTOPQ9Y3Y2 248 aaKnown RBP8.14□□□□□ -1.11
VARS-226ENST00000483275 FAM19A2Q8N3H0 131 aa8.13□□□□□ -1.11
VARS-226ENST00000483275 SERF1AO75920 110 aa8.12□□□□□ -1.11
VARS-226ENST00000483275 TMEM170BQ5T4T1 132 aa8.12□□□□□ -1.11
VARS-226ENST00000483275 LCE2AQ5TA79 106 aaPredicted RBP8.12□□□□□ -1.11
VARS-226ENST00000483275 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
VARS-226ENST00000483275 TRAV12-1A0A0B4J245 112 aa8.11□□□□□ -1.11
VARS-226ENST00000483275 LEPROTL1O95214 131 aa8.11□□□□□ -1.11
VARS-226ENST00000483275 ZNF22P17026 224 aaPredicted RBP8.11□□□□□ -1.11
VARS-226ENST00000483275 C11orf86A6NJI1 115 aa8.1□□□□□ -1.11
VARS-226ENST00000483275 H0Y8G0 127 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms