RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 KIAA1644Q3SXP7 199 aa8.15□□□□□ -1.1
CTDSP1-208ENST00000482272 PRR26Q8N8Z3 221 aa8.15□□□□□ -1.1
CTDSP1-208ENST00000482272 TOMM6Q96B49 74 aa8.15□□□□□ -1.1
CTDSP1-208ENST00000482272 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
CTDSP1-208ENST00000482272 TRAV9-1A0A075B6T8 112 aa8.14□□□□□ -1.11
CTDSP1-208ENST00000482272 UQCC3Q6UW78 93 aa8.14□□□□□ -1.11
CTDSP1-208ENST00000482272 ERASQ7Z444 233 aa8.14□□□□□ -1.11
CTDSP1-208ENST00000482272 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
CTDSP1-208ENST00000482272 LINC01549A6NIU2 74 aa8.13□□□□□ -1.11
CTDSP1-208ENST00000482272 F8VRH5 84 aa8.13□□□□□ -1.11
CTDSP1-208ENST00000482272 LBHQ53QV2 105 aaPredicted RBP8.13□□□□□ -1.11
CTDSP1-208ENST00000482272 LINC00469Q8N7U9 141 aa8.13□□□□□ -1.11
CTDSP1-208ENST00000482272 RNF213Q63HN8 5207 aa8.13□□□□□ -1.11
CTDSP1-208ENST00000482272 IGLV1-50A0A075B6I6 118 aa8.12□□□□□ -1.11
CTDSP1-208ENST00000482272 TMEM218A2RU14 115 aa8.12□□□□□ -1.11
CTDSP1-208ENST00000482272 S100PP25815 95 aa8.12□□□□□ -1.11
CTDSP1-208ENST00000482272 CXCL5P42830 114 aa8.12□□□□□ -1.11
CTDSP1-208ENST00000482272 C22orf24Q9Y442 160 aa8.12□□□□□ -1.11
CTDSP1-208ENST00000482272 NUPR1O60356 82 aa8.11□□□□□ -1.11
CTDSP1-208ENST00000482272 GNB1LQ9BYB4 327 aa8.11□□□□□ -1.11
CTDSP1-208ENST00000482272 XAGE1AQ9HD64 81 aa8.11□□□□□ -1.11
CTDSP1-208ENST00000482272 LPAP08519 4548 aa8.1□□□□□ -1.11
CTDSP1-208ENST00000482272 TINCRA0A1B0GVN0 87 aa8.1□□□□□ -1.11
CTDSP1-208ENST00000482272 ZNF861PO60384 105 aa8.1□□□□□ -1.11
CTDSP1-208ENST00000482272 COX19Q49B96 90 aa8.1□□□□□ -1.11
CTDSP1-208ENST00000482272 PDZD11Q5EBL8 140 aa8.1□□□□□ -1.11
CTDSP1-208ENST00000482272 SEC11CQ9BY50 192 aa8.09□□□□□ -1.11
CTDSP1-208ENST00000482272 LINC01546A6NGU7 62 aa8.08□□□□□ -1.12
CTDSP1-208ENST00000482272 KRTAP1-4P0C5Y4 121 aa8.08□□□□□ -1.12
CTDSP1-208ENST00000482272 RPL13AP40429 203 aaKnown RBP8.08□□□□□ -1.12
CTDSP1-208ENST00000482272 COX7B2Q8TF08 81 aa8.08□□□□□ -1.12
CTDSP1-208ENST00000482272 TP73-AS1Q9UF72 201 aa8.08□□□□□ -1.12
CTDSP1-208ENST00000482272 CARHSP1Q9Y2V2 147 aaKnown RBP8.08□□□□□ -1.12
CTDSP1-208ENST00000482272 SMIM1B2RUZ4 78 aa8.07□□□□□ -1.12
CTDSP1-208ENST00000482272 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
CTDSP1-208ENST00000482272 CST9LQ9H4G1 147 aa8.07□□□□□ -1.12
CTDSP1-208ENST00000482272 SMCO4Q9NRQ5 59 aa8.07□□□□□ -1.12
CTDSP1-208ENST00000482272 IGLV5-45A0A087WSX0 123 aa8.06□□□□□ -1.12
CTDSP1-208ENST00000482272 FABP9Q0Z7S8 132 aa8.06□□□□□ -1.12
CTDSP1-208ENST00000482272 PMVKQ15126 192 aa8.06□□□□□ -1.12
CTDSP1-208ENST00000482272 FA2HQ7L5A8 372 aa8.06□□□□□ -1.12
CTDSP1-208ENST00000482272 MRPL18Q9H0U6 180 aaKnown RBP8.06□□□□□ -1.12
CTDSP1-208ENST00000482272 H3BRM9 83 aa8.04□□□□□ -1.12
CTDSP1-208ENST00000482272 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
CTDSP1-208ENST00000482272 RAB5BP61020 215 aa8.04□□□□□ -1.12
CTDSP1-208ENST00000482272 BCE1O60756 84 aa8.03□□□□□ -1.12
CTDSP1-208ENST00000482272 SPINK8P0C7L1 97 aa8.03□□□□□ -1.12
CTDSP1-208ENST00000482272 LINC00167Q96N53 147 aa8.03□□□□□ -1.12
CTDSP1-208ENST00000482272 RPS10P5Q9NQ39 176 aa8.03□□□□□ -1.12
CTDSP1-208ENST00000482272 RPL37AP8A6NKH3 93 aa8.02□□□□□ -1.13
CTDSP1-208ENST00000482272 ATP5LO75964 103 aa8.02□□□□□ -1.13
CTDSP1-208ENST00000482272 A0A096LNJ9 63 aa8.01□□□□□ -1.13
CTDSP1-208ENST00000482272 NDUFA6P56556 154 aa8.01□□□□□ -1.13
CTDSP1-208ENST00000482272 C10orf91Q5T1B1 145 aa8.01□□□□□ -1.13
CTDSP1-208ENST00000482272 COMMD7Q86VX2 200 aa8.01□□□□□ -1.13
CTDSP1-208ENST00000482272 NKAPP1Q8N9T2 125 aa8.01□□□□□ -1.13
CTDSP1-208ENST00000482272 URB1-AS1Q96HZ7 61 aa8.01□□□□□ -1.13
CTDSP1-208ENST00000482272 RHEBQ15382 184 aa8□□□□□ -1.13
CTDSP1-208ENST00000482272 IGLV5-37A0A075B6J1 123 aa7.99□□□□□ -1.13
CTDSP1-208ENST00000482272 GAGE10A6NGK3 116 aa7.99□□□□□ -1.13
CTDSP1-208ENST00000482272 LINC00614P0C842 121 aa7.99□□□□□ -1.13
CTDSP1-208ENST00000482272 IGLC3P0DOY3 106 aa7.99□□□□□ -1.13
CTDSP1-208ENST00000482272 PRR4Q16378 134 aa7.99□□□□□ -1.13
CTDSP1-208ENST00000482272 TRAPPC1Q9Y5R8 145 aa7.99□□□□□ -1.13
CTDSP1-208ENST00000482272 KRTAP9-6A0A140TA67 174 aa7.98□□□□□ -1.13
CTDSP1-208ENST00000482272 CRYGAP11844 174 aa7.98□□□□□ -1.13
CTDSP1-208ENST00000482272 PFN2P35080 140 aa7.98□□□□□ -1.13
CTDSP1-208ENST00000482272 UBE2AP49459 152 aa7.97□□□□□ -1.13
CTDSP1-208ENST00000482272 KRTAP9-2Q9BYQ4 174 aa7.97□□□□□ -1.13
CTDSP1-208ENST00000482272 IGLV5-39A0A0G2JS06 123 aa7.96□□□□□ -1.14
CTDSP1-208ENST00000482272 HBDP02042 147 aa7.96□□□□□ -1.14
CTDSP1-208ENST00000482272 TYMSOSQ8TAI1 123 aa7.96□□□□□ -1.14
CTDSP1-208ENST00000482272 C18orf32Q8TCD1 76 aa7.96□□□□□ -1.14
CTDSP1-208ENST00000482272 SCO1O75880 301 aa7.95□□□□□ -1.14
CTDSP1-208ENST00000482272 TSPAN13O95857 204 aa7.95□□□□□ -1.14
CTDSP1-208ENST00000482272 ZNF22P17026 224 aaPredicted RBP7.95□□□□□ -1.14
CTDSP1-208ENST00000482272 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
CTDSP1-208ENST00000482272 COX17Q14061 63 aa7.95□□□□□ -1.14
CTDSP1-208ENST00000482272 PMCHL1Q16048 86 aa7.95□□□□□ -1.14
CTDSP1-208ENST00000482272 A0A087X002 238 aa7.94□□□□□ -1.14
CTDSP1-208ENST00000482272 SFTA2Q6UW10 78 aa7.94□□□□□ -1.14
CTDSP1-208ENST00000482272 BAGE3Q86Y29 109 aa7.94□□□□□ -1.14
CTDSP1-208ENST00000482272 ERG28Q9UKR5 140 aa7.94□□□□□ -1.14
CTDSP1-208ENST00000482272 IGKV2-28A0A075B6P5 120 aa7.93□□□□□ -1.14
CTDSP1-208ENST00000482272 IGKV2D-28P01615 120 aa7.93□□□□□ -1.14
CTDSP1-208ENST00000482272 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
CTDSP1-208ENST00000482272 KRTAP13-1Q8IUC0 172 aa7.92□□□□□ -1.14
CTDSP1-208ENST00000482272 Q8NDZ9 215 aa7.92□□□□□ -1.14
CTDSP1-208ENST00000482272 ZNF625Q96I27 306 aaPredicted RBP7.92□□□□□ -1.14
CTDSP1-208ENST00000482272 SND1-IT1Q9HBX3 110 aa7.92□□□□□ -1.14
CTDSP1-208ENST00000482272 APOC3P02656 99 aa7.91□□□□□ -1.14
CTDSP1-208ENST00000482272 FAM19A1Q7Z5A9 133 aa7.91□□□□□ -1.14
CTDSP1-208ENST00000482272 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
CTDSP1-208ENST00000482272 C11orf86A6NJI1 115 aa7.9□□□□□ -1.14
CTDSP1-208ENST00000482272 SNAPINO95295 136 aa7.9□□□□□ -1.14
CTDSP1-208ENST00000482272 VPREB1P12018 145 aa7.9□□□□□ -1.14
CTDSP1-208ENST00000482272 NDUFA5Q16718 116 aa7.9□□□□□ -1.14
CTDSP1-208ENST00000482272 FAM229BQ4G0N7 80 aa7.9□□□□□ -1.14
CTDSP1-208ENST00000482272 TMEM126AQ9H061 195 aa7.9□□□□□ -1.14
CTDSP1-208ENST00000482272 CHTOPQ9Y3Y2 248 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms