RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 Q8IZM0 81 aa10.48□□□□□ -0.73
ECHDC1-216ENST00000479525 LINC01561Q8N1V8 128 aa10.48□□□□□ -0.73
ECHDC1-216ENST00000479525 SCGB3A1Q96QR1 104 aa10.48□□□□□ -0.73
ECHDC1-216ENST00000479525 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
ECHDC1-216ENST00000479525 TMEM218A2RU14 115 aa10.47□□□□□ -0.73
ECHDC1-216ENST00000479525 KRTAP1-4P0C5Y4 121 aa10.47□□□□□ -0.73
ECHDC1-216ENST00000479525 FAM19A3Q7Z5A8 133 aa10.47□□□□□ -0.73
ECHDC1-216ENST00000479525 HERVK_113P63121 156 aa10.46□□□□□ -0.74
ECHDC1-216ENST00000479525 TIMM17AQ99595 171 aa10.46□□□□□ -0.74
ECHDC1-216ENST00000479525 C22orf24Q9Y442 160 aa10.46□□□□□ -0.74
ECHDC1-216ENST00000479525 SMIM1B2RUZ4 78 aa10.44□□□□□ -0.74
ECHDC1-216ENST00000479525 K7EMI3 77 aa10.44□□□□□ -0.74
ECHDC1-216ENST00000479525 SPINK8P0C7L1 97 aa10.44□□□□□ -0.74
ECHDC1-216ENST00000479525 UQCC3Q6UW78 93 aa10.43□□□□□ -0.74
ECHDC1-216ENST00000479525 F8VRH5 84 aa10.42□□□□□ -0.74
ECHDC1-216ENST00000479525 NPSP0C0P6 89 aa10.42□□□□□ -0.74
ECHDC1-216ENST00000479525 RAB5BP61020 215 aa10.42□□□□□ -0.74
ECHDC1-216ENST00000479525 ERASQ7Z444 233 aa10.42□□□□□ -0.74
ECHDC1-216ENST00000479525 PAPPA-AS1Q5QFB9 102 aa10.41□□□□□ -0.74
ECHDC1-216ENST00000479525 COMMD7Q86VX2 200 aa10.41□□□□□ -0.74
ECHDC1-216ENST00000479525 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
ECHDC1-216ENST00000479525 GAGE10A6NGK3 116 aa10.4□□□□□ -0.74
ECHDC1-216ENST00000479525 RPL37AP8A6NKH3 93 aa10.4□□□□□ -0.74
ECHDC1-216ENST00000479525 SEC11AP67812 179 aa10.4□□□□□ -0.74
ECHDC1-216ENST00000479525 SCO1O75880 301 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 S100PP25815 95 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 FABP9Q0Z7S8 132 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 MRPL18Q9H0U6 180 aaKnown RBP10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 TINCRA0A1B0GVN0 87 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 SEC11CQ9BY50 192 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 CST9LQ9H4G1 147 aa10.39□□□□□ -0.75
ECHDC1-216ENST00000479525 TRAV9-1A0A075B6T8 112 aa10.38□□□□□ -0.75
ECHDC1-216ENST00000479525 FA2HQ7L5A8 372 aa10.38□□□□□ -0.75
ECHDC1-216ENST00000479525 MRPL55Q7Z7F7 128 aaKnown RBP10.38□□□□□ -0.75
ECHDC1-216ENST00000479525 SMCO4Q9NRQ5 59 aa10.38□□□□□ -0.75
ECHDC1-216ENST00000479525 ZNF861PO60384 105 aa10.37□□□□□ -0.75
ECHDC1-216ENST00000479525 G0S2P27469 103 aa10.37□□□□□ -0.75
ECHDC1-216ENST00000479525 PMCHL1Q16048 86 aa10.37□□□□□ -0.75
ECHDC1-216ENST00000479525 RPS10P5Q9NQ39 176 aa10.37□□□□□ -0.75
ECHDC1-216ENST00000479525 IGLV1-50A0A075B6I6 118 aa10.36□□□□□ -0.75
ECHDC1-216ENST00000479525 NDUFA6P56556 154 aa10.36□□□□□ -0.75
ECHDC1-216ENST00000479525 PMVKQ15126 192 aa10.36□□□□□ -0.75
ECHDC1-216ENST00000479525 PDZD11Q5EBL8 140 aa10.36□□□□□ -0.75
ECHDC1-216ENST00000479525 LINC00167Q96N53 147 aa10.36□□□□□ -0.75
ECHDC1-216ENST00000479525 IGLV5-45A0A087WSX0 123 aa10.35□□□□□ -0.75
ECHDC1-216ENST00000479525 LINC01546A6NGU7 62 aa10.35□□□□□ -0.75
ECHDC1-216ENST00000479525 CXCL5P42830 114 aa10.35□□□□□ -0.75
ECHDC1-216ENST00000479525 URB1-AS1Q96HZ7 61 aa10.35□□□□□ -0.75
ECHDC1-216ENST00000479525 ANAPC11Q9NYG5 84 aa10.35□□□□□ -0.75
ECHDC1-216ENST00000479525 A0A096LNJ9 63 aa10.34□□□□□ -0.75
ECHDC1-216ENST00000479525 LBHQ53QV2 105 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-216ENST00000479525 NUPR1O60356 82 aa10.33□□□□□ -0.76
ECHDC1-216ENST00000479525 TSPAN13O95857 204 aa10.33□□□□□ -0.76
ECHDC1-216ENST00000479525 PRR4Q16378 134 aa10.33□□□□□ -0.76
ECHDC1-216ENST00000479525 A0A087X002 238 aa10.32□□□□□ -0.76
ECHDC1-216ENST00000479525 PFN2P35080 140 aa10.32□□□□□ -0.76
ECHDC1-216ENST00000479525 IGKV2-28A0A075B6P5 120 aa10.3□□□□□ -0.76
ECHDC1-216ENST00000479525 BCE1O60756 84 aa10.3□□□□□ -0.76
ECHDC1-216ENST00000479525 IGKV2D-28P01615 120 aa10.3□□□□□ -0.76
ECHDC1-216ENST00000479525 ZNF22P17026 224 aaPredicted RBP10.3□□□□□ -0.76
ECHDC1-216ENST00000479525 ZNF625Q96I27 306 aaPredicted RBP10.3□□□□□ -0.76
ECHDC1-216ENST00000479525 TP73-AS1Q9UF72 201 aa10.3□□□□□ -0.76
ECHDC1-216ENST00000479525 C10orf91Q5T1B1 145 aa10.29□□□□□ -0.76
ECHDC1-216ENST00000479525 C18orf32Q8TCD1 76 aa10.29□□□□□ -0.76
ECHDC1-216ENST00000479525 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
ECHDC1-216ENST00000479525 IGLC3P0DOY3 106 aa10.28□□□□□ -0.76
ECHDC1-216ENST00000479525 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
ECHDC1-216ENST00000479525 H3BRM9 83 aa10.27□□□□□ -0.76
ECHDC1-216ENST00000479525 RPL13AP40429 203 aaKnown RBP10.27□□□□□ -0.76
ECHDC1-216ENST00000479525 RPL28P46779 137 aaKnown RBP10.27□□□□□ -0.76
ECHDC1-216ENST00000479525 RHEBQ15382 184 aa10.27□□□□□ -0.76
ECHDC1-216ENST00000479525 COX19Q49B96 90 aa10.27□□□□□ -0.76
ECHDC1-216ENST00000479525 CARHSP1Q9Y2V2 147 aaKnown RBP10.27□□□□□ -0.76
ECHDC1-216ENST00000479525 ATP5LO75964 103 aa10.26□□□□□ -0.77
ECHDC1-216ENST00000479525 Q8NDZ9 215 aa10.26□□□□□ -0.77
ECHDC1-216ENST00000479525 LINC00614P0C842 121 aa10.26□□□□□ -0.77
ECHDC1-216ENST00000479525 IGLV5-39A0A0G2JS06 123 aa10.25□□□□□ -0.77
ECHDC1-216ENST00000479525 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
ECHDC1-216ENST00000479525 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
ECHDC1-216ENST00000479525 HBDP02042 147 aa10.25□□□□□ -0.77
ECHDC1-216ENST00000479525 UBE2AP49459 152 aa10.25□□□□□ -0.77
ECHDC1-216ENST00000479525 PRLHP81277 87 aa10.25□□□□□ -0.77
ECHDC1-216ENST00000479525 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
ECHDC1-216ENST00000479525 TMEM238C9JI98 176 aa10.24□□□□□ -0.77
ECHDC1-216ENST00000479525 APOC3P02656 99 aa10.24□□□□□ -0.77
ECHDC1-216ENST00000479525 ERG28Q9UKR5 140 aa10.24□□□□□ -0.77
ECHDC1-216ENST00000479525 A0A0U1RRA0 63 aa10.23□□□□□ -0.77
ECHDC1-216ENST00000479525 KRTAP13-2Q52LG2 175 aa10.23□□□□□ -0.77
ECHDC1-216ENST00000479525 TMEM170BQ5T4T1 132 aa10.23□□□□□ -0.77
ECHDC1-216ENST00000479525 BAGE3Q86Y29 109 aa10.23□□□□□ -0.77
ECHDC1-216ENST00000479525 TYMSOSQ8TAI1 123 aa10.23□□□□□ -0.77
ECHDC1-216ENST00000479525 SND1-IT1Q9HBX3 110 aa10.23□□□□□ -0.77
ECHDC1-216ENST00000479525 VPREB1P12018 145 aa10.22□□□□□ -0.77
ECHDC1-216ENST00000479525 KRTAP13-1Q8IUC0 172 aa10.22□□□□□ -0.77
ECHDC1-216ENST00000479525 CRYGAP11844 174 aa10.2□□□□□ -0.78
ECHDC1-216ENST00000479525 RETNLBQ9BQ08 111 aa10.2□□□□□ -0.78
ECHDC1-216ENST00000479525 FAM19A1Q7Z5A9 133 aa10.19□□□□□ -0.78
ECHDC1-216ENST00000479525 NDUFA5Q16718 116 aa10.18□□□□□ -0.78
ECHDC1-216ENST00000479525 TMEM126AQ9H061 195 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms