RNA–Protein interactions for RNA: ENST00000479384.1

CLOCK-204, Transcript of clock circadian regulator, humanhuman

TSL 2

Gene CLOCK, Length 426 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-204ENST00000479384 TULP4Q9NRJ4 1543 aa-0.4□□□□□ -2.47
CLOCK-204ENST00000479384 HERC2O95714 4834 aa-0.41□□□□□ -2.47
CLOCK-204ENST00000479384 LINC00959A0A1B0GUT2 108 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 CORTO00230 105 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 SPINK4O60575 86 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 UBE2D3P61077 147 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 UBE2D2P62837 147 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 PRO1854Q9UHT4 67 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 SPG11Q96JI7 2443 aa-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 USP9YO00507 2555 aaPredicted RBP-0.41□□□□□ -2.48
CLOCK-204ENST00000479384 KNL1Q8NG31 2342 aa-0.42□□□□□ -2.48
CLOCK-204ENST00000479384 ITPR3Q14573 2671 aa-0.42□□□□□ -2.48
CLOCK-204ENST00000479384 A0A1B0GWA3 101 aa-0.42□□□□□ -2.48
CLOCK-204ENST00000479384 S100A1P23297 94 aa-0.42□□□□□ -2.48
CLOCK-204ENST00000479384 SARNPP82979 210 aaKnown RBP-0.42□□□□□ -2.48
CLOCK-204ENST00000479384 C12orf57Q99622 126 aa-0.42□□□□□ -2.48
CLOCK-204ENST00000479384 EIF4G3O43432 1585 aaKnown RBP-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 NRKQ7Z2Y5 1582 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 SETBP1Q9Y6X0 1596 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 NBPF19A0A087WUL8 3843 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 FAM223BA6NKX1 122 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 SYS1-DBNDD2H3BUS1 97 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 KRTAP6-2Q3LI66 62 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 GNG8Q9UK08 70 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 HIVEP1P15822 2718 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 TACC2O95359 2948 aa-0.43□□□□□ -2.48
CLOCK-204ENST00000479384 CRYM-AS1A6NIL9 109 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 KRTAP20-2Q3LI61 65 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 DEFB105AQ8NG35 78 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 LCN9Q8WX39 176 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 SPTBN4Q9H254 2564 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 C1orf167Q5SNV9 1468 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 SCN7AQ01118 1682 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 HECTD1Q9ULT8 2610 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 STARD9Q9P2P6 4700 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 PRRC2CQ9Y520 2896 aaKnown RBP-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 REV3LO60673 3130 aa-0.44□□□□□ -2.48
CLOCK-204ENST00000479384 DIP2CQ9Y2E4 1556 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 ZZEF1O43149 2961 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 TOP2BQ02880 1626 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 DOPEY1Q5JWR5 2465 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 ADGRL2O95490 1459 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 IQSEC2Q5JU85 1478 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 COX8AP10176 69 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 SPRR2AP35326 72 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 SNCAP37840 140 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 USMG5Q96IX5 58 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 MYO18BQ8IUG5 2567 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 USH2AO75445 5202 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 ARHGAP5Q13017 1502 aa-0.45□□□□□ -2.48
CLOCK-204ENST00000479384 TEP1Q99973 2627 aaKnown RBP-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 PKD1P98161 4303 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 HTTP42858 3142 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 SONP18583 2426 aaKnown RBP-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 DNAH6Q9C0G6 4158 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 FMN2Q9NZ56 1722 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 MAPKBP1O60336 1514 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 SAA2P0DJI9 122 aaPredicted RBP-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 MRPS10P82664 201 aaKnown RBP-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 TMEM203Q969S6 136 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 C2orf88Q9BSF0 95 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 KIAA0556O60303 1618 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 ANKRD36A6QL64 1941 aa-0.46□□□□□ -2.48
CLOCK-204ENST00000479384 PZPP20742 1482 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 AKAP13Q12802 2813 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 H3BQ15 152 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 M0R2T5 61 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 SPRR2EP22531 72 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 KRTDAPP60985 99 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 KLK9Q2XQG4 91 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 UBR4Q5T4S7 5183 aa-0.47□□□□□ -2.48
CLOCK-204ENST00000479384 PAPPA2Q9BXP8 1791 aa-0.47□□□□□ -2.49
CLOCK-204ENST00000479384 FASNP49327 2511 aaKnown RBP-0.47□□□□□ -2.49
CLOCK-204ENST00000479384 TRANK1O15050 2925 aa-0.48□□□□□ -2.49
CLOCK-204ENST00000479384 TNRC18O15417 2968 aaPredicted RBP-0.48□□□□□ -2.49
CLOCK-204ENST00000479384 MT4P47944 62 aa-0.48□□□□□ -2.49
CLOCK-204ENST00000479384 SEC11AP67812 179 aa-0.48□□□□□ -2.49
CLOCK-204ENST00000479384 GTF2H5Q6ZYL4 71 aa-0.48□□□□□ -2.49
CLOCK-204ENST00000479384 MRC2Q9UBG0 1479 aa-0.48□□□□□ -2.49
CLOCK-204ENST00000479384 NUP188Q5SRE5 1749 aa-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 XRN1Q8IZH2 1706 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 MARF1Q9Y4F3 1742 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 PDCD11Q14690 1871 aaKnown RBP-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 LINC00846Q9NV44 126 aa-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 NLRP1Q9C000 1473 aa-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 RYR3Q15413 4870 aa-0.49□□□□□ -2.49
CLOCK-204ENST00000479384 A0A0G2JMZ2 1700 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 SPHKAPQ2M3C7 1700 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 PDE4DIPQ5VU43 2346 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 LINC00587B1AMM8 73 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 CGREF1Q99674 301 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 AKAP9Q99996 3911 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 DNAH3Q8TD57 4116 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 CC2D2AQ9P2K1 1620 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 FAT3Q8TDW7 4589 aa-0.5□□□□□ -2.49
CLOCK-204ENST00000479384 LAMA1P25391 3075 aa-0.51□□□□□ -2.49
CLOCK-204ENST00000479384 PKHD1L1Q86WI1 4243 aa-0.51□□□□□ -2.49
CLOCK-204ENST00000479384 PLEKHH2Q8IVE3 1493 aa-0.51□□□□□ -2.49
CLOCK-204ENST00000479384 DMXL1Q9Y485 3027 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms