RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 COL14A1Q05707 1796 aaKnown RBP2.88□□□□□ -1.95
RC3H1-204ENST00000479099 CAV3P56539 151 aa2.88□□□□□ -1.95
RC3H1-204ENST00000479099 SDK1Q7Z5N4 2213 aa2.88□□□□□ -1.95
RC3H1-204ENST00000479099 CLASP1Q7Z460 1538 aa2.88□□□□□ -1.95
RC3H1-204ENST00000479099 LRP6O75581 1613 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 LAMC1P11047 1609 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 A0A1B0GUT8 65 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 S100A3P33764 101 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 SPATA8Q6RVD6 105 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 Q6ZQY7 126 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 DEFB107AQ8IZN7 70 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 LINC00472Q9H8W2 130 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 GNG13Q9P2W3 67 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 MROH2AA6NES4 1674 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 DIP2AQ14689 1571 aa2.87□□□□□ -1.95
RC3H1-204ENST00000479099 H0Y9P7 68 aa2.86□□□□□ -1.95
RC3H1-204ENST00000479099 HMGA1P17096 107 aaKnown RBP2.86□□□□□ -1.95
RC3H1-204ENST00000479099 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
RC3H1-204ENST00000479099 ATXN8Q156A1 80 aa2.86□□□□□ -1.95
RC3H1-204ENST00000479099 ZNF831Q5JPB2 1677 aa2.85□□□□□ -1.95
RC3H1-204ENST00000479099 BCORQ6W2J9 1755 aa2.85□□□□□ -1.95
RC3H1-204ENST00000479099 CCL19Q99731 98 aa2.85□□□□□ -1.95
RC3H1-204ENST00000479099 ICE1Q9Y2F5 2266 aa2.85□□□□□ -1.95
RC3H1-204ENST00000479099 NCOA6Q14686 2063 aaPredicted RBP2.84□□□□□ -1.95
RC3H1-204ENST00000479099 TOP2AP11388 1531 aaKnown RBP2.84□□□□□ -1.95
RC3H1-204ENST00000479099 ACYP2P14621 99 aa2.84□□□□□ -1.95
RC3H1-204ENST00000479099 SPINK7P58062 85 aa2.84□□□□□ -1.95
RC3H1-204ENST00000479099 TMEM263Q8WUH6 116 aaKnown RBP2.84□□□□□ -1.95
RC3H1-204ENST00000479099 SYCP2Q9BX26 1530 aa2.83□□□□□ -1.96
RC3H1-204ENST00000479099 ZCCHC13Q8WW36 166 aaKnown RBP2.83□□□□□ -1.96
RC3H1-204ENST00000479099 ANKRD50Q9ULJ7 1429 aa2.83□□□□□ -1.96
RC3H1-204ENST00000479099 VWDEQ8N2E2 1590 aa2.83□□□□□ -1.96
RC3H1-204ENST00000479099 MED13LQ71F56 2210 aa2.83□□□□□ -1.96
RC3H1-204ENST00000479099 EIF2AK4Q9P2K8 1649 aaKnown RBP2.82□□□□□ -1.96
RC3H1-204ENST00000479099 IFI6P09912 130 aa2.82□□□□□ -1.96
RC3H1-204ENST00000479099 C10orf99Q6UWK7 81 aa2.82□□□□□ -1.96
RC3H1-204ENST00000479099 PP632Q6XCG6 107 aa2.82□□□□□ -1.96
RC3H1-204ENST00000479099 NDUFB1O75438 58 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 OBSCN-AS1Q96MR7 158 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 FAM103A1Q9BTL3 118 aaKnown RBP2.81□□□□□ -1.96
RC3H1-204ENST00000479099 SAMD9Q5K651 1589 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 NESP48681 1621 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 RICTORQ6R327 1708 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 PAPPA2Q9BXP8 1791 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 NOTCH2Q04721 2471 aa2.81□□□□□ -1.96
RC3H1-204ENST00000479099 LRRC37A2A6NM11 1700 aa2.8□□□□□ -1.96
RC3H1-204ENST00000479099 A0A0D9SFI3 127 aa2.8□□□□□ -1.96
RC3H1-204ENST00000479099 SPRR5A0A1B0GTR4 108 aa2.8□□□□□ -1.96
RC3H1-204ENST00000479099 INTS1Q8N201 2190 aaKnown RBP2.8□□□□□ -1.96
RC3H1-204ENST00000479099 UGGT1Q9NYU2 1555 aa2.79□□□□□ -1.96
RC3H1-204ENST00000479099 C10orf113Q5VZT2 155 aa2.79□□□□□ -1.96
RC3H1-204ENST00000479099 SNRPGP15A8MWD9 76 aa2.78□□□□□ -1.96
RC3H1-204ENST00000479099 UNQ6190/PRO20217Q6UXQ8 127 aa2.78□□□□□ -1.96
RC3H1-204ENST00000479099 ZFHX3Q15911 3703 aa2.78□□□□□ -1.96
RC3H1-204ENST00000479099 CROCC2H7BZ55 1655 aa2.77□□□□□ -1.97
RC3H1-204ENST00000479099 TRAV21A0A0B4J279 112 aa2.77□□□□□ -1.97
RC3H1-204ENST00000479099 J3QRE1 110 aa2.77□□□□□ -1.97
RC3H1-204ENST00000479099 KRTAP13-4Q3LI77 160 aa2.77□□□□□ -1.97
RC3H1-204ENST00000479099 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.77□□□□□ -1.97
RC3H1-204ENST00000479099 KMT2BQ9UMN6 2715 aaPredicted RBP2.77□□□□□ -1.97
RC3H1-204ENST00000479099 E9PCH4 1651 aa2.76□□□□□ -1.97
RC3H1-204ENST00000479099 A0A096LNT2 108 aa2.76□□□□□ -1.97
RC3H1-204ENST00000479099 FXYD6Q9H0Q3 95 aa2.76□□□□□ -1.97
RC3H1-204ENST00000479099 ABCC6O95255 1503 aa2.75□□□□□ -1.97
RC3H1-204ENST00000479099 LCE6AA0A183 80 aa2.75□□□□□ -1.97
RC3H1-204ENST00000479099 NREPQ16612 68 aa2.75□□□□□ -1.97
RC3H1-204ENST00000479099 COL4A4P53420 1690 aaPredicted RBP2.74□□□□□ -1.97
RC3H1-204ENST00000479099 PLAC4Q8WY50 150 aa2.74□□□□□ -1.97
RC3H1-204ENST00000479099 LRRC7Q96NW7 1537 aa2.73□□□□□ -1.97
RC3H1-204ENST00000479099 BIVM-ERCC5R4GMW8 1640 aa2.73□□□□□ -1.97
RC3H1-204ENST00000479099 TRBV30A0A0K0K1B3 111 aa2.73□□□□□ -1.97
RC3H1-204ENST00000479099 LINC01549A6NIU2 74 aa2.73□□□□□ -1.97
RC3H1-204ENST00000479099 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
RC3H1-204ENST00000479099 CACNA1CQ13936 2221 aa2.73□□□□□ -1.97
RC3H1-204ENST00000479099 KIAA0556O60303 1618 aa2.72□□□□□ -1.97
RC3H1-204ENST00000479099 POLR1AO95602 1720 aaPredicted RBP2.72□□□□□ -1.97
RC3H1-204ENST00000479099 Q6ZRX8 168 aa2.72□□□□□ -1.97
RC3H1-204ENST00000479099 SMIM11BQ8TCY0 68 aa2.72□□□□□ -1.97
RC3H1-204ENST00000479099 FMN2Q9NZ56 1722 aa2.72□□□□□ -1.97
RC3H1-204ENST00000479099 ABCA1O95477 2261 aa2.72□□□□□ -1.97
RC3H1-204ENST00000479099 NRAPQ86VF7 1730 aa2.71□□□□□ -1.98
RC3H1-204ENST00000479099 GVQW2A0A096LPI5 108 aaPredicted RBP2.71□□□□□ -1.98
RC3H1-204ENST00000479099 TRBV6-1A0A0K0K1D8 114 aa2.71□□□□□ -1.98
RC3H1-204ENST00000479099 G3V318 75 aa2.71□□□□□ -1.98
RC3H1-204ENST00000479099 KRTAP10-1P60331 282 aa2.71□□□□□ -1.98
RC3H1-204ENST00000479099 CPS1P31327 1500 aa2.71□□□□□ -1.98
RC3H1-204ENST00000479099 CACNA1GO43497 2377 aa2.7□□□□□ -1.98
RC3H1-204ENST00000479099 DEFB103AP81534 67 aa2.7□□□□□ -1.98
RC3H1-204ENST00000479099 WFDC9Q8NEX5 89 aa2.7□□□□□ -1.98
RC3H1-204ENST00000479099 SSC5DA1L4H1 1573 aa2.7□□□□□ -1.98
RC3H1-204ENST00000479099 LINC00959A0A1B0GUT2 108 aa2.69□□□□□ -1.98
RC3H1-204ENST00000479099 DEFB112Q30KQ8 113 aa2.69□□□□□ -1.98
RC3H1-204ENST00000479099 LINC00575Q6W349 94 aa2.69□□□□□ -1.98
RC3H1-204ENST00000479099 GAFA1Q96PS6 74 aa2.69□□□□□ -1.98
RC3H1-204ENST00000479099 LY75O60449 1722 aa2.68□□□□□ -1.98
RC3H1-204ENST00000479099 A0A1B0GU69 56 aa2.68□□□□□ -1.98
RC3H1-204ENST00000479099 F5P12259 2224 aa2.68□□□□□ -1.98
RC3H1-204ENST00000479099 ABCA5Q8WWZ7 1642 aa2.68□□□□□ -1.98
RC3H1-204ENST00000479099 BRD3OSQ6XYD6 125 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms