RNA–Protein interactions for RNA: ENST00000478503.6

SH3D19-207, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 4,038 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-207ENST00000478503 C6orf223Q8N319 242 aa4.37□□□□□ -1.71
SH3D19-207ENST00000478503 C11orf72Q8NBR9 251 aa4.37□□□□□ -1.71
SH3D19-207ENST00000478503 TRAV12-1A0A0B4J245 112 aa4.37□□□□□ -1.71
SH3D19-207ENST00000478503 KRTAP1-3Q8IUG1 177 aa4.37□□□□□ -1.71
SH3D19-207ENST00000478503 TRRAPQ9Y4A5 3859 aa4.37□□□□□ -1.71
SH3D19-207ENST00000478503 HIVEP1P15822 2718 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 TRGV1A0A0A0MS02 117 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 PRSS2P07478 247 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 DEFB114Q30KQ6 69 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 MED14OSP0DP75 135 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 LINC00313P59037 77 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 ZNF625Q96I27 306 aaPredicted RBP4.36□□□□□ -1.71
SH3D19-207ENST00000478503 A6NED7 52 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 PPP1R17O96001 155 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 FSHBP01225 129 aa4.36□□□□□ -1.71
SH3D19-207ENST00000478503 TRBV7-3A0A075B6L6 115 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 I3L3M4 83 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 ODF3L2Q3SX64 289 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 NSD1Q96L73 2696 aaPredicted RBP4.35□□□□□ -1.71
SH3D19-207ENST00000478503 C20orf203Q8NBC4 194 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 FAM218AQ96MZ4 157 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 TM2D3Q9BRN9 247 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 IGLV9-49A0A0B4J1Y8 123 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 UBE2AP49459 152 aa4.35□□□□□ -1.71
SH3D19-207ENST00000478503 STAB1Q9NY15 2570 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 IGLV4-3A0A075B6K6 122 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 Q6ZTI0 123 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 MAST4O15021 2626 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 CFAP126Q5VTH2 177 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 SCXQ7RTU7 201 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 C4orf3Q8WVX3 66 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 LINC00467Q9BRT7 94 aa4.34□□□□□ -1.71
SH3D19-207ENST00000478503 A0A0J9YY99 117 aa4.34□□□□□ -1.72
SH3D19-207ENST00000478503 NOP10Q9NPE3 64 aaKnown RBP4.34□□□□□ -1.72
SH3D19-207ENST00000478503 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 NFE4Q86UQ8 179 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 POM121L12Q8N7R1 296 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 F8P00451 2351 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 ZNF22P17026 224 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-207ENST00000478503 LINC00474Q9P2X8 69 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
SH3D19-207ENST00000478503 KIAA0087Q14695 138 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-207ENST00000478503 LINC01006Q8NI28 216 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 TMEM141Q96I45 108 aa4.33□□□□□ -1.72
SH3D19-207ENST00000478503 NBEAL1Q6ZS30 2694 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 INSP01308 110 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 Q1RN00 199 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 C19orf73Q9NVV2 129 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 TRBV6-5A0A0K0K1A5 114 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 LINC01554Q52M75 96 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 MUSTN1Q8IVN3 82 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 ODF3Q96PU9 254 aa4.32□□□□□ -1.72
SH3D19-207ENST00000478503 CFC1BP0CG36 223 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 CFC1P0CG37 223 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 IGHV3-30-3P0DP02 117 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 FAM104AQ969W3 186 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 ANK3Q12955 4377 aaKnown RBP4.31□□□□□ -1.72
SH3D19-207ENST00000478503 KMT2BQ9UMN6 2715 aaPredicted RBP4.31□□□□□ -1.72
SH3D19-207ENST00000478503 TRGV2A0A075B6R0 118 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 A0A096LPF7 62 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 TMEM223A0PJW6 202 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 DEFB4AO15263 64 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 DEFB130BP0DP73 79 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 DEFB130AP0DP74 79 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 CDKN2A-AS1Q9UH64 79 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
SH3D19-207ENST00000478503 IGHV3-30P01768 117 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 IGHV3-30-5P0DP03 117 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 ADAMTSL4-AS1Q5T5F5 129 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 NDUFA11Q86Y39 141 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 CHCHD10Q8WYQ3 142 aaPredicted RBP4.3□□□□□ -1.72
SH3D19-207ENST00000478503 AMELXQ99217 191 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 CHCHD7Q9BUK0 85 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 COX6A2Q02221 97 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 RHOHQ15669 191 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 C20orf197Q8N268 126 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 LINC00337Q8N6G1 96 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 Q8N2B8 174 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 LEPROTO15243 131 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 SLC25A29Q8N8R3 303 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 NDUFA12Q9UI09 145 aa4.3□□□□□ -1.72
SH3D19-207ENST00000478503 UBE2D4Q9Y2X8 147 aa4.29□□□□□ -1.72
SH3D19-207ENST00000478503 A0A0J9YXY3 114 aa4.29□□□□□ -1.72
SH3D19-207ENST00000478503 KRTAP1-1Q07627 177 aa4.29□□□□□ -1.72
SH3D19-207ENST00000478503 C7orf65Q6ZTY9 151 aa4.29□□□□□ -1.72
SH3D19-207ENST00000478503 SMCPP49901 116 aaPredicted RBP4.28□□□□□ -1.72
SH3D19-207ENST00000478503 UBE2D1P51668 147 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 SND1-IT1Q9HBX3 110 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 TOMM7Q9P0U1 55 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 COL6A5A8TX70 2615 aa4.28□□□□□ -1.72
SH3D19-207ENST00000478503 GIG44P09565 113 aaPredicted RBP4.28□□□□□ -1.72
SH3D19-207ENST00000478503 NTM-AS1Q6ZSK4 140 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms