RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 A0A096LNT2 108 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 A0A0D9SFI3 127 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 CTXND1A0A1B0GTU2 59 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 A0A1B0GUT8 65 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 COX17Q14061 63 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 C10orf99Q6UWK7 81 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 TMEM263Q8WUH6 116 aaKnown RBP0.64□□□□□ -2.31
TARDBP-208ENST00000477447 OBSCN-AS1Q96MR7 158 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 CCL19Q99731 98 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 SHPRHQ149N8 1683 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 MUC4Q99102 2169 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 SUPT6HQ7KZ85 1726 aaKnown RBP0.64□□□□□ -2.31
TARDBP-208ENST00000477447 PHRF1Q9P1Y6 1649 aaKnown RBP0.64□□□□□ -2.31
TARDBP-208ENST00000477447 SLIT1O75093 1534 aa0.64□□□□□ -2.31
TARDBP-208ENST00000477447 ZFC3H1O60293 1989 aaKnown RBP0.63□□□□□ -2.31
TARDBP-208ENST00000477447 MYH9P35579 1960 aaKnown RBP0.63□□□□□ -2.31
TARDBP-208ENST00000477447 CCDC88AQ3V6T2 1871 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 RGPD2P0DJD1 1756 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 SCN7AQ01118 1682 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 TRAV21A0A0B4J279 112 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 LINC01549A6NIU2 74 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 G3V318 75 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 FREM3P0C091 2139 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 CAV3P56539 151 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 NREPQ16612 68 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 C10orf113Q5VZT2 155 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 NCBP2-AS2Q69YL0 99 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 SMIM4Q8WVI0 70 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 GNG13Q9P2W3 67 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 XRN1Q8IZH2 1706 aaKnown RBP0.63□□□□□ -2.31
TARDBP-208ENST00000477447 EIF2AK4Q9P2K8 1649 aaKnown RBP0.63□□□□□ -2.31
TARDBP-208ENST00000477447 CPS1P31327 1500 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 EFCAB6Q5THR3 1501 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 ANKRD17O75179 2603 aaKnown RBP0.63□□□□□ -2.31
TARDBP-208ENST00000477447 PLXNA2O75051 1894 aa0.63□□□□□ -2.31
TARDBP-208ENST00000477447 ZNF831Q5JPB2 1677 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 ALS2Q96Q42 1657 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 NRXN2Q9P2S2 1712 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 GVQW2A0A096LPI5 108 aaPredicted RBP0.62□□□□□ -2.31
TARDBP-208ENST00000477447 TRBV30A0A0K0K1B3 111 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 TRBV6-1A0A0K0K1D8 114 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 NDUFB1O75438 58 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 ACYP2P14621 99 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 Q6ZQY7 126 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 DOCK1Q14185 1865 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 AGLP35573 1532 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 RGPD4Q7Z3J3 1758 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 CHD3Q12873 2000 aaKnown RBP0.62□□□□□ -2.31
TARDBP-208ENST00000477447 NHSQ6T4R5 1651 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 RREB1Q92766 1687 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 PTPRFP10586 1907 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 MYLKQ15746 1914 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 MYH13Q9UKX3 1938 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 ERCC6L2Q5T890 1561 aa0.62□□□□□ -2.31
TARDBP-208ENST00000477447 PATJQ8NI35 1801 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 KIF20BQ96Q89 1820 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 EXPH5Q8NEV8 1989 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 NESP48681 1621 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 CICQ96RK0 1608 aaPredicted RBP0.61□□□□□ -2.31
TARDBP-208ENST00000477447 SCN11AQ9UI33 1791 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 K7EMI3 77 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 ENHOQ6UWT2 76 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 Q6ZRX8 168 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 MYH1P12882 1939 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 SSC5DA1L4H1 1573 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 EML5Q05BV3 1969 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 TANC2Q9HCD6 1990 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 CRYBG1Q9Y4K1 1723 aa0.61□□□□□ -2.31
TARDBP-208ENST00000477447 RGPD3A6NKT7 1758 aaPredicted RBP0.6□□□□□ -2.31
TARDBP-208ENST00000477447 DLEC1Q9Y238 1755 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 ARFGEF2Q9Y6D5 1785 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 MYO18AQ92614 2054 aaKnown RBP0.6□□□□□ -2.31
TARDBP-208ENST00000477447 KIAA0586Q9BVV6 1533 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 AHNAK2Q8IVF2 5795 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 PLAC4Q8WY50 150 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 CMC2Q9NRP2 79 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 NWD1Q149M9 1564 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 ABCA5Q8WWZ7 1642 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 BIVM-ERCC5R4GMW8 1640 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 RGPD8O14715 1765 aaPredicted RBP0.6□□□□□ -2.31
TARDBP-208ENST00000477447 RGPD5Q99666 1765 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 ANAPC1Q9H1A4 1944 aa0.6□□□□□ -2.31
TARDBP-208ENST00000477447 KIAA1549Q9HCM3 1950 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 WIZO95785 1651 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 TULP4Q9NRJ4 1543 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 IFT172Q9UG01 1749 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 A0A1B0GU69 56 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 IGIPA6NJ69 53 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 NDUFA4O00483 81 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 LY6G6CO95867 125 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 COX7BP24311 80 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 RPL37P61927 97 aaKnown RBP0.59□□□□□ -2.31
TARDBP-208ENST00000477447 DEFB112Q30KQ8 113 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 LINC00575Q6W349 94 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 TOMM5Q8N4H5 51 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 WFDC9Q8NEX5 89 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 SMIM11BQ8TCY0 68 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 GAFA1Q96PS6 74 aa0.59□□□□□ -2.31
TARDBP-208ENST00000477447 NMES1Q9C002 83 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms