RNA–Protein interactions for RNA: ENST00000477155.5

CCDC30-209, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 3,653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-209ENST00000477155 A0A1B0GWB2 263 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 FABP2P12104 132 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 CKS1BP61024 79 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 HERV-K104P63124 156 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 SPANXDQ9BXN6 97 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 Q9HAA7 133 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 SPANXCQ9NY87 97 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 LINC00588Q9Y4M8 146 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 LOC107984156A0A0G2JMH3 177 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 ARL17AQ8IVW1 177 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 C6orf223Q8N319 242 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 C15orf53Q8NAA6 179 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 LINC00308Q8TCZ7 52 aa4.48□□□□□ -1.69
CCDC30-209ENST00000477155 CCL18P55774 89 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 SOSTDC1Q6X4U4 206 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 MIR7-3HGQ8N6C7 128 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 PRO1854Q9UHT4 67 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 SPCS1Q9Y6A9 102 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 TIMM17BO60830 172 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 TSPAN13O95857 204 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 C9orf116Q5BN46 136 aaPredicted RBP4.47□□□□□ -1.69
CCDC30-209ENST00000477155 IGKV2D-24A0A075B6R9 120 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 Q8IZM0 81 aa4.47□□□□□ -1.69
CCDC30-209ENST00000477155 KIAA0087Q14695 138 aa4.46□□□□□ -1.7
CCDC30-209ENST00000477155 Q1RN00 199 aa4.46□□□□□ -1.7
CCDC30-209ENST00000477155 PRKDCP78527 4128 aaKnown RBP4.46□□□□□ -1.7
CCDC30-209ENST00000477155 LINC01556Q5JQF7 62 aa4.46□□□□□ -1.7
CCDC30-209ENST00000477155 LYSTQ99698 3801 aa4.46□□□□□ -1.7
CCDC30-209ENST00000477155 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.45□□□□□ -1.7
CCDC30-209ENST00000477155 TRAV8-4A0A0B4J246 113 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 IFITM1P13164 125 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 HIGD2BQ4VC39 106 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 ERG28Q9UKR5 140 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 SCGB1C2P0DMR2 95 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 PSMB2P49721 201 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 SPAG11BQ08648 103 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 C10orf25Q5T742 122 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 UNQ6190/PRO20217Q6UXQ8 127 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 GTF2H5Q6ZYL4 71 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 C1orf43Q9BWL3 253 aa4.45□□□□□ -1.7
CCDC30-209ENST00000477155 IBA57-AS1B1ANH7 110 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 K7EP34 96 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 MTURNQ8N3F0 131 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 A0A0B4J2C4 111 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 H3BMG7 143 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 DNAH10OSP0CZ25 163 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 LINC01561Q8N1V8 128 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 KLK5Q9Y337 293 aaPredicted RBP4.44□□□□□ -1.7
CCDC30-209ENST00000477155 CSMD3Q7Z407 3707 aa4.44□□□□□ -1.7
CCDC30-209ENST00000477155 ZNF561-AS1K7EIQ3 104 aa4.43□□□□□ -1.7
CCDC30-209ENST00000477155 KRTAP26-1Q6PEX3 210 aa4.43□□□□□ -1.7
CCDC30-209ENST00000477155 SND1-IT1Q9HBX3 110 aa4.43□□□□□ -1.7
CCDC30-209ENST00000477155 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
CCDC30-209ENST00000477155 RPL13AP40429 203 aaKnown RBP4.43□□□□□ -1.7
CCDC30-209ENST00000477155 UBE2DNLQ8IWF7 75 aa4.43□□□□□ -1.7
CCDC30-209ENST00000477155 TGP01266 2768 aa4.43□□□□□ -1.7
CCDC30-209ENST00000477155 PRR3P79522 188 aaKnown RBP4.42□□□□□ -1.7
CCDC30-209ENST00000477155 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
CCDC30-209ENST00000477155 CXCL5P42830 114 aa4.42□□□□□ -1.7
CCDC30-209ENST00000477155 CASC10Q5T4H9 136 aa4.42□□□□□ -1.7
CCDC30-209ENST00000477155 APLNQ9ULZ1 77 aa4.42□□□□□ -1.7
CCDC30-209ENST00000477155 LECT2O14960 151 aa4.41□□□□□ -1.7
CCDC30-209ENST00000477155 CAMK2N2Q96S95 79 aa4.41□□□□□ -1.7
CCDC30-209ENST00000477155 TRIAP1O43715 76 aa4.41□□□□□ -1.7
CCDC30-209ENST00000477155 TCL1BO95988 128 aa4.41□□□□□ -1.7
CCDC30-209ENST00000477155 C15orf56Q8N910 161 aa4.41□□□□□ -1.7
CCDC30-209ENST00000477155 NTN5Q8WTR8 489 aaPredicted RBP4.41□□□□□ -1.7
CCDC30-209ENST00000477155 OR13C6PQ8NH95 151 aa4.41□□□□□ -1.7
CCDC30-209ENST00000477155 IGKV2-28A0A075B6P5 120 aa4.4□□□□□ -1.7
CCDC30-209ENST00000477155 IGKV2D-28P01615 120 aa4.4□□□□□ -1.7
CCDC30-209ENST00000477155 LINC00337Q8N6G1 96 aa4.4□□□□□ -1.7
CCDC30-209ENST00000477155 C6orf48Q9UBA6 75 aa4.4□□□□□ -1.7
CCDC30-209ENST00000477155 XAGE1AQ9HD64 81 aa4.4□□□□□ -1.71
CCDC30-209ENST00000477155 WFDC2Q14508 124 aa4.4□□□□□ -1.71
CCDC30-209ENST00000477155 Q6ZRU5 148 aa4.4□□□□□ -1.71
CCDC30-209ENST00000477155 KRTAP1-5Q9BYS1 174 aa4.4□□□□□ -1.71
CCDC30-209ENST00000477155 DNAH7Q8WXX0 4024 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 FBN3Q75N90 2809 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 COX17Q14061 63 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 CLEC2BQ92478 149 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 UPK3BQ9BT76 320 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 LYRM7Q5U5X0 104 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 TRBV30A0A0K0K1B3 111 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 COX6CP09669 75 aa4.39□□□□□ -1.71
CCDC30-209ENST00000477155 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
CCDC30-209ENST00000477155 TRAV13-2A0A0B4J235 113 aa4.38□□□□□ -1.71
CCDC30-209ENST00000477155 NUPR2A6NF83 97 aa4.38□□□□□ -1.71
CCDC30-209ENST00000477155 USP17L23D6RBM5 183 aa4.38□□□□□ -1.71
CCDC30-209ENST00000477155 GAGE2EQ4V326 116 aa4.38□□□□□ -1.71
CCDC30-209ENST00000477155 Q8NDZ9 215 aa4.38□□□□□ -1.71
CCDC30-209ENST00000477155 GAGE2DQ9UEU5 116 aa4.38□□□□□ -1.71
CCDC30-209ENST00000477155 TRBV20-1A0A075B6N2 111 aa4.37□□□□□ -1.71
CCDC30-209ENST00000477155 NCR3O14931 201 aa4.37□□□□□ -1.71
CCDC30-209ENST00000477155 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
CCDC30-209ENST00000477155 ETDBQ3ZM63 59 aa4.37□□□□□ -1.71
CCDC30-209ENST00000477155 DNAH10Q8IVF4 4471 aa4.37□□□□□ -1.71
CCDC30-209ENST00000477155 C9JAW5 83 aa4.36□□□□□ -1.71
CCDC30-209ENST00000477155 F8W1H4 67 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms