RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 NDUFC2-KCTD14E9PQ53 114 aa13.13□□□□□ -0.31
LIMK1-204ENST00000476792 ODF1Q14990 250 aa13.13□□□□□ -0.31
LIMK1-204ENST00000476792 NDUFA5Q16718 116 aa13.13□□□□□ -0.31
LIMK1-204ENST00000476792 COX19Q49B96 90 aa13.13□□□□□ -0.31
LIMK1-204ENST00000476792 C10orf91Q5T1B1 145 aa13.13□□□□□ -0.31
LIMK1-204ENST00000476792 RHEBQ15382 184 aa13.12□□□□□ -0.31
LIMK1-204ENST00000476792 FA2HQ7L5A8 372 aa13.12□□□□□ -0.31
LIMK1-204ENST00000476792 KRTAP11-1Q8IUC1 163 aa13.12□□□□□ -0.31
LIMK1-204ENST00000476792 CARHSP1Q9Y2V2 147 aaKnown RBP13.12□□□□□ -0.31
LIMK1-204ENST00000476792 KRTAP7-1Q8IUC3 87 aa13.11□□□□□ -0.31
LIMK1-204ENST00000476792 Q8IZM0 81 aa13.11□□□□□ -0.31
LIMK1-204ENST00000476792 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
LIMK1-204ENST00000476792 SMCO4Q9NRQ5 59 aa13.11□□□□□ -0.31
LIMK1-204ENST00000476792 HMCN2Q8NDA2 5059 aa13.11□□□□□ -0.31
LIMK1-204ENST00000476792 M0QXV9 152 aa13.1□□□□□ -0.31
LIMK1-204ENST00000476792 C9orf129Q5T035 196 aaKnown RBP13.1□□□□□ -0.31
LIMK1-204ENST00000476792 LINC01546A6NGU7 62 aa13.09□□□□□ -0.31
LIMK1-204ENST00000476792 UBE2BP63146 152 aa13.08□□□□□ -0.32
LIMK1-204ENST00000476792 IGLV7-43P04211 117 aa13.07□□□□□ -0.32
LIMK1-204ENST00000476792 CST9LQ9H4G1 147 aa13.07□□□□□ -0.32
LIMK1-204ENST00000476792 TINCRA0A1B0GVN0 87 aa13.06□□□□□ -0.32
LIMK1-204ENST00000476792 KRTAP10-8P60410 259 aa13.06□□□□□ -0.32
LIMK1-204ENST00000476792 SLC7A5P1Q8MH63 180 aa13.06□□□□□ -0.32
LIMK1-204ENST00000476792 XAGE1AQ9HD64 81 aa13.06□□□□□ -0.32
LIMK1-204ENST00000476792 LINC01549A6NIU2 74 aa13.05□□□□□ -0.32
LIMK1-204ENST00000476792 SMIM1B2RUZ4 78 aa13.05□□□□□ -0.32
LIMK1-204ENST00000476792 TRAPPC1Q9Y5R8 145 aa13.05□□□□□ -0.32
LIMK1-204ENST00000476792 F8VRH5 84 aa13.04□□□□□ -0.32
LIMK1-204ENST00000476792 APOC3P02656 99 aa13.04□□□□□ -0.32
LIMK1-204ENST00000476792 PMVKQ15126 192 aa13.04□□□□□ -0.32
LIMK1-204ENST00000476792 SPINK8P0C7L1 97 aa13.03□□□□□ -0.32
LIMK1-204ENST00000476792 COX7B2Q8TF08 81 aa13.03□□□□□ -0.32
LIMK1-204ENST00000476792 NDUFA6P56556 154 aa13.02□□□□□ -0.33
LIMK1-204ENST00000476792 PDZD11Q5EBL8 140 aa13.02□□□□□ -0.33
LIMK1-204ENST00000476792 DIRC1Q969H9 104 aa13.02□□□□□ -0.33
LIMK1-204ENST00000476792 IGLV5-45A0A087WSX0 123 aa13.01□□□□□ -0.33
LIMK1-204ENST00000476792 CXCL5P42830 114 aa13.01□□□□□ -0.33
LIMK1-204ENST00000476792 C18orf32Q8TCD1 76 aa13□□□□□ -0.33
LIMK1-204ENST00000476792 TNXBP22105 4242 aa12.99□□□□□ -0.33
LIMK1-204ENST00000476792 PMCHL1Q16048 86 aa12.99□□□□□ -0.33
LIMK1-204ENST00000476792 URB1-AS1Q96HZ7 61 aa12.99□□□□□ -0.33
LIMK1-204ENST00000476792 C22orf24Q9Y442 160 aa12.99□□□□□ -0.33
LIMK1-204ENST00000476792 LINC00614P0C842 121 aa12.98□□□□□ -0.33
LIMK1-204ENST00000476792 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
LIMK1-204ENST00000476792 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
LIMK1-204ENST00000476792 A0A096LNJ9 63 aa12.97□□□□□ -0.33
LIMK1-204ENST00000476792 SNAPINO95295 136 aa12.97□□□□□ -0.33
LIMK1-204ENST00000476792 RAB5BP61020 215 aa12.97□□□□□ -0.33
LIMK1-204ENST00000476792 SVBPQ8N300 66 aa12.97□□□□□ -0.33
LIMK1-204ENST00000476792 H0Y9J4 135 aa12.96□□□□□ -0.33
LIMK1-204ENST00000476792 H3BRM9 83 aa12.96□□□□□ -0.33
LIMK1-204ENST00000476792 HBDP02042 147 aa12.95□□□□□ -0.34
LIMK1-204ENST00000476792 PRR26Q8N8Z3 221 aa12.95□□□□□ -0.34
LIMK1-204ENST00000476792 ATP6V1G1O75348 118 aa12.94□□□□□ -0.34
LIMK1-204ENST00000476792 IGLC3P0DOY3 106 aa12.94□□□□□ -0.34
LIMK1-204ENST00000476792 LBHQ53QV2 105 aaPredicted RBP12.94□□□□□ -0.34
LIMK1-204ENST00000476792 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
LIMK1-204ENST00000476792 ATP5LO75964 103 aa12.9□□□□□ -0.34
LIMK1-204ENST00000476792 ZNF22P17026 224 aaPredicted RBP12.9□□□□□ -0.34
LIMK1-204ENST00000476792 BAGE3Q86Y29 109 aa12.89□□□□□ -0.35
LIMK1-204ENST00000476792 UBR4Q5T4S7 5183 aa12.89□□□□□ -0.35
LIMK1-204ENST00000476792 GAGE10A6NGK3 116 aa12.88□□□□□ -0.35
LIMK1-204ENST00000476792 RPL37AP8A6NKH3 93 aa12.88□□□□□ -0.35
LIMK1-204ENST00000476792 PFN2P35080 140 aa12.88□□□□□ -0.35
LIMK1-204ENST00000476792 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
LIMK1-204ENST00000476792 NUPR1O60356 82 aa12.87□□□□□ -0.35
LIMK1-204ENST00000476792 S100A1P23297 94 aa12.87□□□□□ -0.35
LIMK1-204ENST00000476792 LINC00167Q96N53 147 aa12.87□□□□□ -0.35
LIMK1-204ENST00000476792 IGLV5-39A0A0G2JS06 123 aa12.86□□□□□ -0.35
LIMK1-204ENST00000476792 C11orf86A6NJI1 115 aa12.86□□□□□ -0.35
LIMK1-204ENST00000476792 ZNF861PO60384 105 aa12.86□□□□□ -0.35
LIMK1-204ENST00000476792 KRTAP1-4P0C5Y4 121 aa12.86□□□□□ -0.35
LIMK1-204ENST00000476792 TMEM170BQ5T4T1 132 aa12.86□□□□□ -0.35
LIMK1-204ENST00000476792 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
LIMK1-204ENST00000476792 NKAPP1Q8N9T2 125 aa12.84□□□□□ -0.35
LIMK1-204ENST00000476792 ZNF625Q96I27 306 aaPredicted RBP12.84□□□□□ -0.35
LIMK1-204ENST00000476792 IGLV1-50A0A075B6I6 118 aa12.83□□□□□ -0.36
LIMK1-204ENST00000476792 ERG28Q9UKR5 140 aa12.82□□□□□ -0.36
LIMK1-204ENST00000476792 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
LIMK1-204ENST00000476792 BCE1O60756 84 aa12.81□□□□□ -0.36
LIMK1-204ENST00000476792 SCO1O75880 301 aa12.81□□□□□ -0.36
LIMK1-204ENST00000476792 CBLN2Q8IUK8 224 aa12.81□□□□□ -0.36
LIMK1-204ENST00000476792 CHCHD1Q96BP2 118 aaKnown RBP12.8□□□□□ -0.36
LIMK1-204ENST00000476792 IGLV5-37A0A075B6J1 123 aa12.79□□□□□ -0.36
LIMK1-204ENST00000476792 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
LIMK1-204ENST00000476792 IFI27L1Q96BM0 104 aa12.78□□□□□ -0.36
LIMK1-204ENST00000476792 SND1-IT1Q9HBX3 110 aa12.78□□□□□ -0.36
LIMK1-204ENST00000476792 IGKV2-28A0A075B6P5 120 aa12.76□□□□□ -0.37
LIMK1-204ENST00000476792 IGKV2D-28P01615 120 aa12.76□□□□□ -0.37
LIMK1-204ENST00000476792 RPL13AP40429 203 aaKnown RBP12.75□□□□□ -0.37
LIMK1-204ENST00000476792 FAM19A2Q8N3H0 131 aa12.75□□□□□ -0.37
LIMK1-204ENST00000476792 HSBP1O75506 76 aa12.74□□□□□ -0.37
LIMK1-204ENST00000476792 UBE2AP49459 152 aa12.74□□□□□ -0.37
LIMK1-204ENST00000476792 COX17Q14061 63 aa12.74□□□□□ -0.37
LIMK1-204ENST00000476792 LRP2P98164 4655 aa12.73□□□□□ -0.37
LIMK1-204ENST00000476792 TRAV12-1A0A0B4J245 112 aa12.73□□□□□ -0.37
LIMK1-204ENST00000476792 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
LIMK1-204ENST00000476792 VPREB1P12018 145 aa12.73□□□□□ -0.37
LIMK1-204ENST00000476792 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
LIMK1-204ENST00000476792 TRGC2P03986 189 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms