RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 COMMD7Q86VX2 200 aa5.13□□□□□ -1.59
SATB1-213ENST00000476178 PRR26Q8N8Z3 221 aa5.13□□□□□ -1.59
SATB1-213ENST00000476178 CDKN2A-AS1Q9UH64 79 aa5.13□□□□□ -1.59
SATB1-213ENST00000476178 M0QXV9 152 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 PRSS2P07478 247 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 HERVK_113P63121 156 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 SEC11AP67812 179 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 C6orf226Q5I0X4 101 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 Q8IZM0 81 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 SCGB3A1Q96QR1 104 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 TOMM7Q9P0U1 55 aa5.12□□□□□ -1.59
SATB1-213ENST00000476178 CARHSP1Q9Y2V2 147 aaKnown RBP5.12□□□□□ -1.59
SATB1-213ENST00000476178 H0Y9J4 135 aa5.11□□□□□ -1.59
SATB1-213ENST00000476178 CKS1BP61024 79 aa5.11□□□□□ -1.59
SATB1-213ENST00000476178 COX19Q49B96 90 aa5.11□□□□□ -1.59
SATB1-213ENST00000476178 MRPL18Q9H0U6 180 aaKnown RBP5.11□□□□□ -1.59
SATB1-213ENST00000476178 IGLV5-45A0A087WSX0 123 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 TINCRA0A1B0GVN0 87 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 LINC01549A6NIU2 74 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 FABP9Q0Z7S8 132 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 RHEBQ15382 184 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 URB1-AS1Q96HZ7 61 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 CST9LQ9H4G1 147 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 GEMIN7Q9H840 131 aaKnown RBP5.1□□□□□ -1.59
SATB1-213ENST00000476178 RPS10P5Q9NQ39 176 aa5.1□□□□□ -1.59
SATB1-213ENST00000476178 IGLV1-50A0A075B6I6 118 aa5.09□□□□□ -1.59
SATB1-213ENST00000476178 SMIM1B2RUZ4 78 aa5.09□□□□□ -1.59
SATB1-213ENST00000476178 F8VRH5 84 aa5.09□□□□□ -1.59
SATB1-213ENST00000476178 A0A096LNJ9 63 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 PMVKQ15126 192 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 LBHQ53QV2 105 aaPredicted RBP5.08□□□□□ -1.6
SATB1-213ENST00000476178 PDZD11Q5EBL8 140 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 FA2HQ7L5A8 372 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 LINC00469Q8N7U9 141 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 XAGE1AQ9HD64 81 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 C22orf24Q9Y442 160 aa5.08□□□□□ -1.6
SATB1-213ENST00000476178 RPL13AP40429 203 aaKnown RBP5.07□□□□□ -1.6
SATB1-213ENST00000476178 PRR4Q16378 134 aa5.07□□□□□ -1.6
SATB1-213ENST00000476178 C18orf32Q8TCD1 76 aa5.07□□□□□ -1.6
SATB1-213ENST00000476178 COX7B2Q8TF08 81 aa5.07□□□□□ -1.6
SATB1-213ENST00000476178 SMCO4Q9NRQ5 59 aa5.07□□□□□ -1.6
SATB1-213ENST00000476178 LRP2P98164 4655 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 APOC3P02656 99 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 KRTAP1-4P0C5Y4 121 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 SPINK8P0C7L1 97 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 LINC00614P0C842 121 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 CXCL5P42830 114 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 TRAPPC1Q9Y5R8 145 aa5.06□□□□□ -1.6
SATB1-213ENST00000476178 ZNF861PO60384 105 aa5.05□□□□□ -1.6
SATB1-213ENST00000476178 IGLC3P0DOY3 106 aa5.05□□□□□ -1.6
SATB1-213ENST00000476178 IGLV5-39A0A0G2JS06 123 aa5.04□□□□□ -1.6
SATB1-213ENST00000476178 NUPR1O60356 82 aa5.04□□□□□ -1.6
SATB1-213ENST00000476178 PMCHL1Q16048 86 aa5.04□□□□□ -1.6
SATB1-213ENST00000476178 YPEL4Q96NS1 127 aa5.04□□□□□ -1.6
SATB1-213ENST00000476178 TP73-AS1Q9UF72 201 aa5.04□□□□□ -1.6
SATB1-213ENST00000476178 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
SATB1-213ENST00000476178 H3BRM9 83 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 SNAPINO95295 136 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 TSPAN13O95857 204 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 HBDP02042 147 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 ZNF22P17026 224 aaPredicted RBP5.03□□□□□ -1.6
SATB1-213ENST00000476178 RPL28P46779 137 aaKnown RBP5.03□□□□□ -1.6
SATB1-213ENST00000476178 RAB5BP61020 215 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 MRPL55Q7Z7F7 128 aaKnown RBP5.03□□□□□ -1.6
SATB1-213ENST00000476178 SVBPQ8N300 66 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 LINC00167Q96N53 147 aa5.03□□□□□ -1.6
SATB1-213ENST00000476178 IGLV5-37A0A075B6J1 123 aa5.02□□□□□ -1.61
SATB1-213ENST00000476178 GAGE10A6NGK3 116 aa5.02□□□□□ -1.61
SATB1-213ENST00000476178 RPL37AP8A6NKH3 93 aa5.02□□□□□ -1.61
SATB1-213ENST00000476178 NDUFA6P56556 154 aa5.02□□□□□ -1.61
SATB1-213ENST00000476178 BCE1O60756 84 aa5.01□□□□□ -1.61
SATB1-213ENST00000476178 ATP5LO75964 103 aa5.01□□□□□ -1.61
SATB1-213ENST00000476178 CRYGAP11844 174 aa5.01□□□□□ -1.61
SATB1-213ENST00000476178 NDUFA5Q16718 116 aa5.01□□□□□ -1.61
SATB1-213ENST00000476178 BAGE3Q86Y29 109 aa5.01□□□□□ -1.61
SATB1-213ENST00000476178 LPAP08519 4548 aa5.01□□□□□ -1.61
SATB1-213ENST00000476178 C11orf86A6NJI1 115 aa5□□□□□ -1.61
SATB1-213ENST00000476178 PFN2P35080 140 aa5□□□□□ -1.61
SATB1-213ENST00000476178 NKAPP1Q8N9T2 125 aa5□□□□□ -1.61
SATB1-213ENST00000476178 TYMSOSQ8TAI1 123 aa5□□□□□ -1.61
SATB1-213ENST00000476178 UBE2AP49459 152 aa4.99□□□□□ -1.61
SATB1-213ENST00000476178 ERG28Q9UKR5 140 aa4.99□□□□□ -1.61
SATB1-213ENST00000476178 TRAV12-1A0A0B4J245 112 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 SCO1O75880 301 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 VPREB1P12018 145 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 COX17Q14061 63 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 TMEM170BQ5T4T1 132 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 KRTAP13-1Q8IUC0 172 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 Q8NDZ9 215 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 CHCHD1Q96BP2 118 aaKnown RBP4.98□□□□□ -1.61
SATB1-213ENST00000476178 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
SATB1-213ENST00000476178 SND1-IT1Q9HBX3 110 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 ANAPC11Q9NYG5 84 aa4.98□□□□□ -1.61
SATB1-213ENST00000476178 CHTOPQ9Y3Y2 248 aaKnown RBP4.98□□□□□ -1.61
SATB1-213ENST00000476178 A0A087X002 238 aa4.97□□□□□ -1.61
SATB1-213ENST00000476178 TMEM223A0PJW6 202 aa4.97□□□□□ -1.61
SATB1-213ENST00000476178 CBLN2Q8IUK8 224 aa4.97□□□□□ -1.61
SATB1-213ENST00000476178 IGKV2-28A0A075B6P5 120 aa4.96□□□□□ -1.62
SATB1-213ENST00000476178 IGKV2D-28P01615 120 aa4.96□□□□□ -1.62
SATB1-213ENST00000476178 FAM19A2Q8N3H0 131 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms