RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TSPAN13O95857 204 aa14.75□□□□□ -0.05
TMEM54-205ENST00000475208 ADCYAP1P18509 176 aa14.75□□□□□ -0.05
TMEM54-205ENST00000475208 UQCC3Q6UW78 93 aa14.75□□□□□ -0.05
TMEM54-205ENST00000475208 Q8N8P6 123 aa14.74□□□□□ -0.05
TMEM54-205ENST00000475208 ALKBH7Q9BT30 221 aaPredicted RBP14.74□□□□□ -0.05
TMEM54-205ENST00000475208 TMEM218A2RU14 115 aa14.73□□□□□ -0.05
TMEM54-205ENST00000475208 A0A0U1RQV1 116 aa14.72□□□□□ -0.05
TMEM54-205ENST00000475208 NPSP0C0P6 89 aa14.71□□□□□ -0.05
TMEM54-205ENST00000475208 ORMDL2Q53FV1 153 aa14.71□□□□□ -0.05
TMEM54-205ENST00000475208 FAM19A3Q7Z5A8 133 aa14.71□□□□□ -0.05
TMEM54-205ENST00000475208 A0A087X002 238 aa14.7□□□□□ -0.06
TMEM54-205ENST00000475208 IGIPA6NJ69 53 aa14.7□□□□□ -0.06
TMEM54-205ENST00000475208 RPL28P46779 137 aaKnown RBP14.7□□□□□ -0.06
TMEM54-205ENST00000475208 MRPL55Q7Z7F7 128 aaKnown RBP14.7□□□□□ -0.06
TMEM54-205ENST00000475208 TP73-AS1Q9UF72 201 aa14.7□□□□□ -0.06
TMEM54-205ENST00000475208 F8VRH5 84 aa14.69□□□□□ -0.06
TMEM54-205ENST00000475208 CDKN2A-AS1Q9UH64 79 aa14.69□□□□□ -0.06
TMEM54-205ENST00000475208 BCE1O60756 84 aa14.68□□□□□ -0.06
TMEM54-205ENST00000475208 HERVK_113P63121 156 aa14.68□□□□□ -0.06
TMEM54-205ENST00000475208 SEC11AP67812 179 aa14.67□□□□□ -0.06
TMEM54-205ENST00000475208 CRYGAP11844 174 aa14.66□□□□□ -0.06
TMEM54-205ENST00000475208 TYMSOSQ8TAI1 123 aa14.66□□□□□ -0.06
TMEM54-205ENST00000475208 K7EMI3 77 aa14.65□□□□□ -0.06
TMEM54-205ENST00000475208 SEC11CQ9BY50 192 aa14.65□□□□□ -0.06
TMEM54-205ENST00000475208 GEMIN7Q9H840 131 aaKnown RBP14.65□□□□□ -0.06
TMEM54-205ENST00000475208 CXCL5P42830 114 aa14.64□□□□□ -0.07
TMEM54-205ENST00000475208 PAPPA-AS1Q5QFB9 102 aa14.64□□□□□ -0.07
TMEM54-205ENST00000475208 TRAV9-1A0A075B6T8 112 aa14.63□□□□□ -0.07
TMEM54-205ENST00000475208 NXT2Q9NPJ8 142 aaKnown RBP14.63□□□□□ -0.07
TMEM54-205ENST00000475208 RPL37AP8A6NKH3 93 aa14.62□□□□□ -0.07
TMEM54-205ENST00000475208 LINC00167Q96N53 147 aa14.62□□□□□ -0.07
TMEM54-205ENST00000475208 KIAA1644Q3SXP7 199 aa14.61□□□□□ -0.07
TMEM54-205ENST00000475208 TIMM17AQ99595 171 aa14.61□□□□□ -0.07
TMEM54-205ENST00000475208 COMMD7Q86VX2 200 aa14.6□□□□□ -0.07
TMEM54-205ENST00000475208 ANAPC11Q9NYG5 84 aa14.59□□□□□ -0.07
TMEM54-205ENST00000475208 GAGE10A6NGK3 116 aa14.58□□□□□ -0.08
TMEM54-205ENST00000475208 SMIM1B2RUZ4 78 aa14.58□□□□□ -0.08
TMEM54-205ENST00000475208 KRTAP9-2Q9BYQ4 174 aa14.58□□□□□ -0.08
TMEM54-205ENST00000475208 G0S2P27469 103 aa14.57□□□□□ -0.08
TMEM54-205ENST00000475208 C10orf91Q5T1B1 145 aa14.57□□□□□ -0.08
TMEM54-205ENST00000475208 TOMM6Q96B49 74 aa14.57□□□□□ -0.08
TMEM54-205ENST00000475208 S100PP25815 95 aa14.56□□□□□ -0.08
TMEM54-205ENST00000475208 COX7B2Q8TF08 81 aa14.56□□□□□ -0.08
TMEM54-205ENST00000475208 GNB1LQ9BYB4 327 aa14.56□□□□□ -0.08
TMEM54-205ENST00000475208 KRTAP13-2Q52LG2 175 aa14.55□□□□□ -0.08
TMEM54-205ENST00000475208 PDZD11Q5EBL8 140 aa14.55□□□□□ -0.08
TMEM54-205ENST00000475208 UBE2AP49459 152 aa14.54□□□□□ -0.08
TMEM54-205ENST00000475208 KRTAP13-1Q8IUC0 172 aa14.54□□□□□ -0.08
TMEM54-205ENST00000475208 FAT4Q6V0I7 4981 aa14.53□□□□□ -0.08
TMEM54-205ENST00000475208 SCGB3A1Q96QR1 104 aa14.53□□□□□ -0.08
TMEM54-205ENST00000475208 IGLV5-37A0A075B6J1 123 aa14.52□□□□□ -0.09
TMEM54-205ENST00000475208 TINCRA0A1B0GVN0 87 aa14.52□□□□□ -0.09
TMEM54-205ENST00000475208 ERASQ7Z444 233 aa14.52□□□□□ -0.09
TMEM54-205ENST00000475208 NKAPP1Q8N9T2 125 aa14.52□□□□□ -0.09
TMEM54-205ENST00000475208 RETNLBQ9BQ08 111 aa14.52□□□□□ -0.09
TMEM54-205ENST00000475208 IGLV5-45A0A087WSX0 123 aa14.51□□□□□ -0.09
TMEM54-205ENST00000475208 RAB5BP61020 215 aa14.51□□□□□ -0.09
TMEM54-205ENST00000475208 LINC01546A6NGU7 62 aa14.5□□□□□ -0.09
TMEM54-205ENST00000475208 COX19Q49B96 90 aa14.5□□□□□ -0.09
TMEM54-205ENST00000475208 LCE2AQ5TA79 106 aaPredicted RBP14.5□□□□□ -0.09
TMEM54-205ENST00000475208 RHEBQ15382 184 aa14.49□□□□□ -0.09
TMEM54-205ENST00000475208 FAM229BQ4G0N7 80 aa14.49□□□□□ -0.09
TMEM54-205ENST00000475208 LINC00304Q8N9R0 145 aa14.49□□□□□ -0.09
TMEM54-205ENST00000475208 SPINK8P0C7L1 97 aa14.48□□□□□ -0.09
TMEM54-205ENST00000475208 RPS10P5Q9NQ39 176 aa14.47□□□□□ -0.09
TMEM54-205ENST00000475208 IGKV2-28A0A075B6P5 120 aa14.46□□□□□ -0.09
TMEM54-205ENST00000475208 SCO1O75880 301 aa14.46□□□□□ -0.09
TMEM54-205ENST00000475208 IGKV2D-28P01615 120 aa14.46□□□□□ -0.09
TMEM54-205ENST00000475208 MRPL18Q9H0U6 180 aaKnown RBP14.46□□□□□ -0.09
TMEM54-205ENST00000475208 MUC17Q685J3 4493 aa14.44□□□□□ -0.1
TMEM54-205ENST00000475208 FABP9Q0Z7S8 132 aa14.44□□□□□ -0.1
TMEM54-205ENST00000475208 CST9LQ9H4G1 147 aa14.44□□□□□ -0.1
TMEM54-205ENST00000475208 IGKV2D-26A0A0A0MRZ7 120 aa14.43□□□□□ -0.1
TMEM54-205ENST00000475208 CDIP1Q9H305 208 aa14.43□□□□□ -0.1
TMEM54-205ENST00000475208 LINC01549A6NIU2 74 aa14.42□□□□□ -0.1
TMEM54-205ENST00000475208 ATP5LO75964 103 aa14.42□□□□□ -0.1
TMEM54-205ENST00000475208 PRLHP81277 87 aa14.42□□□□□ -0.1
TMEM54-205ENST00000475208 TPRXLQ17RH7 258 aa14.41□□□□□ -0.1
TMEM54-205ENST00000475208 PFN2P35080 140 aa14.39□□□□□ -0.11
TMEM54-205ENST00000475208 PMVKQ15126 192 aa14.39□□□□□ -0.11
TMEM54-205ENST00000475208 FA2HQ7L5A8 372 aa14.39□□□□□ -0.11
TMEM54-205ENST00000475208 FAM19A1Q7Z5A9 133 aa14.39□□□□□ -0.11
TMEM54-205ENST00000475208 IGLV7-46A0A075B6I9 117 aa14.38□□□□□ -0.11
TMEM54-205ENST00000475208 H3BRM9 83 aa14.38□□□□□ -0.11
TMEM54-205ENST00000475208 VPREB1P12018 145 aa14.37□□□□□ -0.11
TMEM54-205ENST00000475208 TMEM126AQ9H061 195 aa14.37□□□□□ -0.11
TMEM54-205ENST00000475208 SMCO4Q9NRQ5 59 aa14.37□□□□□ -0.11
TMEM54-205ENST00000475208 TMEM238C9JI98 176 aa14.36□□□□□ -0.11
TMEM54-205ENST00000475208 APOC3P02656 99 aa14.35□□□□□ -0.11
TMEM54-205ENST00000475208 TRAPPC1Q9Y5R8 145 aa14.35□□□□□ -0.11
TMEM54-205ENST00000475208 CTAG1AP78358 180 aa14.34□□□□□ -0.11
TMEM54-205ENST00000475208 SND1-IT1Q9HBX3 110 aa14.34□□□□□ -0.11
TMEM54-205ENST00000475208 URB1-AS1Q96HZ7 61 aa14.33□□□□□ -0.12
TMEM54-205ENST00000475208 A0A096LNJ9 63 aa14.32□□□□□ -0.12
TMEM54-205ENST00000475208 IGLV5-39A0A0G2JS06 123 aa14.32□□□□□ -0.12
TMEM54-205ENST00000475208 M0R378 163 aa14.32□□□□□ -0.12
TMEM54-205ENST00000475208 C18orf32Q8TCD1 76 aa14.32□□□□□ -0.12
TMEM54-205ENST00000475208 ERG28Q9UKR5 140 aa14.32□□□□□ -0.12
TMEM54-205ENST00000475208 SNAPINO95295 136 aa14.31□□□□□ -0.12
TMEM54-205ENST00000475208 IGLC3P0DOY3 106 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms