RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 SEC11AP67812 179 aa11.17□□□□□ -0.62
DNMT3A-210ENST00000474807 C6orf226Q5I0X4 101 aa11.17□□□□□ -0.62
DNMT3A-210ENST00000474807 ERASQ7Z444 233 aa11.16□□□□□ -0.62
DNMT3A-210ENST00000474807 DIRC1Q969H9 104 aa11.16□□□□□ -0.62
DNMT3A-210ENST00000474807 ALKBH7Q9BT30 221 aaPredicted RBP11.16□□□□□ -0.62
DNMT3A-210ENST00000474807 SEC11CQ9BY50 192 aa11.16□□□□□ -0.62
DNMT3A-210ENST00000474807 GNB1LQ9BYB4 327 aa11.15□□□□□ -0.62
DNMT3A-210ENST00000474807 LPAP08519 4548 aa11.14□□□□□ -0.63
DNMT3A-210ENST00000474807 LINC01546A6NGU7 62 aa11.14□□□□□ -0.63
DNMT3A-210ENST00000474807 H0Y9J4 135 aa11.14□□□□□ -0.63
DNMT3A-210ENST00000474807 UBE2BP63146 152 aa11.14□□□□□ -0.63
DNMT3A-210ENST00000474807 SCGB3A1Q96QR1 104 aa11.14□□□□□ -0.63
DNMT3A-210ENST00000474807 GEMIN7Q9H840 131 aaKnown RBP11.14□□□□□ -0.63
DNMT3A-210ENST00000474807 S100PP25815 95 aa11.13□□□□□ -0.63
DNMT3A-210ENST00000474807 F8VRH5 84 aa11.12□□□□□ -0.63
DNMT3A-210ENST00000474807 LINC00469Q8N7U9 141 aa11.12□□□□□ -0.63
DNMT3A-210ENST00000474807 TINCRA0A1B0GVN0 87 aa11.11□□□□□ -0.63
DNMT3A-210ENST00000474807 PRR26Q8N8Z3 221 aa11.11□□□□□ -0.63
DNMT3A-210ENST00000474807 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
DNMT3A-210ENST00000474807 SMIM1B2RUZ4 78 aa11.1□□□□□ -0.63
DNMT3A-210ENST00000474807 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
DNMT3A-210ENST00000474807 IGLV5-45A0A087WSX0 123 aa11.09□□□□□ -0.63
DNMT3A-210ENST00000474807 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
DNMT3A-210ENST00000474807 CXCL5P42830 114 aa11.09□□□□□ -0.63
DNMT3A-210ENST00000474807 COX19Q49B96 90 aa11.09□□□□□ -0.63
DNMT3A-210ENST00000474807 C10orf91Q5T1B1 145 aa11.09□□□□□ -0.63
DNMT3A-210ENST00000474807 C22orf24Q9Y442 160 aa11.09□□□□□ -0.63
DNMT3A-210ENST00000474807 PDZD11Q5EBL8 140 aa11.08□□□□□ -0.64
DNMT3A-210ENST00000474807 COMMD7Q86VX2 200 aa11.08□□□□□ -0.64
DNMT3A-210ENST00000474807 CST9LQ9H4G1 147 aa11.08□□□□□ -0.64
DNMT3A-210ENST00000474807 MRPL18Q9H0U6 180 aaKnown RBP11.07□□□□□ -0.64
DNMT3A-210ENST00000474807 FABP9Q0Z7S8 132 aa11.06□□□□□ -0.64
DNMT3A-210ENST00000474807 COX7B2Q8TF08 81 aa11.06□□□□□ -0.64
DNMT3A-210ENST00000474807 PMVKQ15126 192 aa11.05□□□□□ -0.64
DNMT3A-210ENST00000474807 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
DNMT3A-210ENST00000474807 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
DNMT3A-210ENST00000474807 IGLV1-50A0A075B6I6 118 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 NUPR1O60356 82 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 ZNF861PO60384 105 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 RHEBQ15382 184 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 LBHQ53QV2 105 aaPredicted RBP11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 RPS10P5Q9NQ39 176 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 SMCO4Q9NRQ5 59 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
DNMT3A-210ENST00000474807 SPINK8P0C7L1 97 aa11.02□□□□□ -0.65
DNMT3A-210ENST00000474807 MRPL55Q7Z7F7 128 aaKnown RBP11.02□□□□□ -0.65
DNMT3A-210ENST00000474807 A0A096LNJ9 63 aa11.01□□□□□ -0.65
DNMT3A-210ENST00000474807 URB1-AS1Q96HZ7 61 aa11.01□□□□□ -0.65
DNMT3A-210ENST00000474807 IGLC3P0DOY3 106 aa10.99□□□□□ -0.65
DNMT3A-210ENST00000474807 H3BRM9 83 aa10.98□□□□□ -0.65
DNMT3A-210ENST00000474807 RAB5BP61020 215 aa10.98□□□□□ -0.65
DNMT3A-210ENST00000474807 C18orf32Q8TCD1 76 aa10.98□□□□□ -0.65
DNMT3A-210ENST00000474807 LINC00614P0C842 121 aa10.97□□□□□ -0.65
DNMT3A-210ENST00000474807 LINC00167Q96N53 147 aa10.97□□□□□ -0.65
DNMT3A-210ENST00000474807 TRAPPC1Q9Y5R8 145 aa10.97□□□□□ -0.65
DNMT3A-210ENST00000474807 IGLV5-39A0A0G2JS06 123 aa10.96□□□□□ -0.65
DNMT3A-210ENST00000474807 BCE1O60756 84 aa10.96□□□□□ -0.65
DNMT3A-210ENST00000474807 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
DNMT3A-210ENST00000474807 IGLV5-37A0A075B6J1 123 aa10.95□□□□□ -0.66
DNMT3A-210ENST00000474807 RPL37AP8A6NKH3 93 aa10.95□□□□□ -0.66
DNMT3A-210ENST00000474807 ATP5LO75964 103 aa10.94□□□□□ -0.66
DNMT3A-210ENST00000474807 HBDP02042 147 aa10.94□□□□□ -0.66
DNMT3A-210ENST00000474807 ZNF22P17026 224 aaPredicted RBP10.94□□□□□ -0.66
DNMT3A-210ENST00000474807 NDUFA6P56556 154 aa10.94□□□□□ -0.66
DNMT3A-210ENST00000474807 RPL28P46779 137 aaKnown RBP10.93□□□□□ -0.66
DNMT3A-210ENST00000474807 PMCHL1Q16048 86 aa10.93□□□□□ -0.66
DNMT3A-210ENST00000474807 GAGE10A6NGK3 116 aa10.92□□□□□ -0.66
DNMT3A-210ENST00000474807 APOC3P02656 99 aa10.91□□□□□ -0.66
DNMT3A-210ENST00000474807 PFN2P35080 140 aa10.9□□□□□ -0.66
DNMT3A-210ENST00000474807 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
DNMT3A-210ENST00000474807 KRTAP13-1Q8IUC0 172 aa10.89□□□□□ -0.67
DNMT3A-210ENST00000474807 A0A087X002 238 aa10.88□□□□□ -0.67
DNMT3A-210ENST00000474807 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
DNMT3A-210ENST00000474807 SNAPINO95295 136 aa10.88□□□□□ -0.67
DNMT3A-210ENST00000474807 BAGE3Q86Y29 109 aa10.88□□□□□ -0.67
DNMT3A-210ENST00000474807 SVBPQ8N300 66 aa10.88□□□□□ -0.67
DNMT3A-210ENST00000474807 ERG28Q9UKR5 140 aa10.88□□□□□ -0.67
DNMT3A-210ENST00000474807 SCO1O75880 301 aa10.87□□□□□ -0.67
DNMT3A-210ENST00000474807 COX17Q14061 63 aa10.87□□□□□ -0.67
DNMT3A-210ENST00000474807 SND1-IT1Q9HBX3 110 aa10.87□□□□□ -0.67
DNMT3A-210ENST00000474807 VPREB1P12018 145 aa10.86□□□□□ -0.67
DNMT3A-210ENST00000474807 IGKV2-28A0A075B6P5 120 aa10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 IGKV2D-28P01615 120 aa10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 NDUFA5Q16718 116 aa10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 TMEM170BQ5T4T1 132 aa10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 ZNF625Q96I27 306 aaPredicted RBP10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 YPEL4Q96NS1 127 aa10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 MUC2Q02817 5179 aa10.85□□□□□ -0.67
DNMT3A-210ENST00000474807 CRYGAP11844 174 aa10.84□□□□□ -0.67
DNMT3A-210ENST00000474807 UBE2AP49459 152 aa10.83□□□□□ -0.68
DNMT3A-210ENST00000474807 SFTA2Q6UW10 78 aa10.83□□□□□ -0.68
DNMT3A-210ENST00000474807 CHTOPQ9Y3Y2 248 aaKnown RBP10.83□□□□□ -0.68
DNMT3A-210ENST00000474807 RPL24P83731 157 aaKnown RBP10.82□□□□□ -0.68
DNMT3A-210ENST00000474807 PRR4Q16378 134 aa10.82□□□□□ -0.68
DNMT3A-210ENST00000474807 Q8NDZ9 215 aa10.82□□□□□ -0.68
DNMT3A-210ENST00000474807 ANAPC11Q9NYG5 84 aa10.82□□□□□ -0.68
DNMT3A-210ENST00000474807 TYMSOSQ8TAI1 123 aa10.81□□□□□ -0.68
DNMT3A-210ENST00000474807 CHCHD1Q96BP2 118 aaKnown RBP10.81□□□□□ -0.68
DNMT3A-210ENST00000474807 TRAV12-1A0A0B4J245 112 aa10.8□□□□□ -0.68
DNMT3A-210ENST00000474807 TSPAN13O95857 204 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms