RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 DEFB121Q5J5C9 76 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 VPS25Q9BRG1 176 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 PFN2P35080 140 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 LINC00158P58513 81 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 LYRM7Q5U5X0 104 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 LINC00308Q8TCZ7 52 aa3.36□□□□□ -1.87
TM4SF1-202ENST00000472441 A0A1B0GUV1 79 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 TEX48A0A1B0GUV7 120 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 TIMM17BO60830 172 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 ICOSQ9Y6W8 199 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 DNAH10Q8IVF4 4471 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 A0A087WZ39 114 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 IFITM1P13164 125 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 RPL13AP40429 203 aaKnown RBP3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 HERV-K104P63124 156 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 SOSTDC1Q6X4U4 206 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 DNAH7Q8WXX0 4024 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 TRIAP1O43715 76 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 REG3AQ06141 175 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 Q6ZTC4 211 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 MIR7-3HGQ8N6C7 128 aa3.35□□□□□ -1.87
TM4SF1-202ENST00000472441 TRBV20-1A0A075B6N2 111 aa3.34□□□□□ -1.87
TM4SF1-202ENST00000472441 A0A0J9YWU9 116 aa3.34□□□□□ -1.87
TM4SF1-202ENST00000472441 C2orf82Q6UX34 121 aa3.34□□□□□ -1.87
TM4SF1-202ENST00000472441 CHCHD10Q8WYQ3 142 aaPredicted RBP3.34□□□□□ -1.87
TM4SF1-202ENST00000472441 PRO0461Q9UI25 63 aa3.34□□□□□ -1.87
TM4SF1-202ENST00000472441 KLK12Q9UKR0 248 aa3.34□□□□□ -1.87
TM4SF1-202ENST00000472441 C9JAW5 83 aa3.34□□□□□ -1.88
TM4SF1-202ENST00000472441 MALP21145 153 aa3.34□□□□□ -1.88
TM4SF1-202ENST00000472441 EGFEM1PQ0D2K5 195 aa3.34□□□□□ -1.88
TM4SF1-202ENST00000472441 COX6CP09669 75 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 SMCPP49901 116 aaPredicted RBP3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 NANOS2P60321 138 aaKnown RBP3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 KPRPQ5T749 579 aaPredicted RBP3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 LELP1Q5T871 98 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 LYPD5Q6UWN5 251 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 LINC00526Q96FQ7 95 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 COX7A2LO14548 114 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 LCE2BO14633 110 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 CKS1BP61024 79 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 PRKDCP78527 4128 aaKnown RBP3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 COPS9Q8WXC6 57 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 CLEC2BQ92478 149 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 ATXN8Q156A1 80 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 CD164L2Q6UWJ8 174 aa3.33□□□□□ -1.88
TM4SF1-202ENST00000472441 GAGE12HA6NDE8 117 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 UBE2WQ96B02 151 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 SND1-IT1Q9HBX3 110 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 DEFB131BA0A096LNP1 70 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 SLC25A20O43772 301 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 WFDC10BQ8IUB3 73 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 C11orf45Q8TAV5 145 aa3.32□□□□□ -1.88
TM4SF1-202ENST00000472441 IBA57-AS1B1ANH7 110 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 J3QR89 54 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 CCL18P55774 89 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 LINC01620Q4KN68 170 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 C9orf116Q5BN46 136 aaPredicted RBP3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 Q8IZM0 81 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 OR13C6PQ8NH95 151 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 CRPP02741 224 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 C6orf223Q8N319 242 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 MDFIQ99750 246 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 KRTAP4-8Q9BYQ9 185 aa3.31□□□□□ -1.88
TM4SF1-202ENST00000472441 FOXI1Q12951 378 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 ESRGQ1W209 222 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 ENHOQ6UWT2 76 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 ANKRD29Q8N6D5 301 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 KIAA0087Q14695 138 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 LINC00337Q8N6G1 96 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 IGKV2-28A0A075B6P5 120 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 TRAV13-2A0A0B4J235 113 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 IGKV2D-28P01615 120 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 PRR3P79522 188 aaKnown RBP3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 SPAG11BQ08648 103 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 UNQ6190/PRO20217Q6UXQ8 127 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 TEN1Q86WV5 123 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 FBN3Q75N90 2809 aa3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 HUWE1Q7Z6Z7 4374 aaKnown RBP3.3□□□□□ -1.88
TM4SF1-202ENST00000472441 A0A1B0GV72 72 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 C10orf25Q5T742 122 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 NTN5Q8WTR8 489 aaPredicted RBP3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 K7EIL1 84 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 LST1O00453 97 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 KRTAP17-1Q9BYP8 105 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 PLECQ15149 4684 aaKnown RBP3.29□□□□□ -1.88
TM4SF1-202ENST00000472441 HIGD2BQ4VC39 106 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 LINC01561Q8N1V8 128 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 PPDPFLQ8WWR9 84 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 SPATA25Q9BR10 227 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 TEX49A0A1B0GTD5 131 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 H3BNG1 76 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 SMIM11BQ8TCY0 68 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 DNAH3Q8TD57 4116 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 CXCL5P42830 114 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 Q9HAA7 133 aa3.28□□□□□ -1.88
TM4SF1-202ENST00000472441 KLK5Q9Y337 293 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms