RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 C11orf45Q8TAV5 145 aa11.59□□□□□ -0.55
SMARCD3-206ENST00000470588 IBA57-AS1B1ANH7 110 aa11.59□□□□□ -0.55
SMARCD3-206ENST00000470588 SOSTDC1Q6X4U4 206 aa11.59□□□□□ -0.55
SMARCD3-206ENST00000470588 Q8IZM0 81 aa11.58□□□□□ -0.56
SMARCD3-206ENST00000470588 CHCHD10Q8WYQ3 142 aaPredicted RBP11.58□□□□□ -0.56
SMARCD3-206ENST00000470588 NOTCH1P46531 2555 aa11.58□□□□□ -0.56
SMARCD3-206ENST00000470588 COX7A2LO14548 114 aa11.57□□□□□ -0.56
SMARCD3-206ENST00000470588 Q6ZTC4 211 aa11.56□□□□□ -0.56
SMARCD3-206ENST00000470588 LINC00158P58513 81 aa11.56□□□□□ -0.56
SMARCD3-206ENST00000470588 Q8N3U1 123 aa11.56□□□□□ -0.56
SMARCD3-206ENST00000470588 COX6CP09669 75 aa11.55□□□□□ -0.56
SMARCD3-206ENST00000470588 RPL13AP40429 203 aaKnown RBP11.55□□□□□ -0.56
SMARCD3-206ENST00000470588 TRIAP1O43715 76 aa11.54□□□□□ -0.56
SMARCD3-206ENST00000470588 MIR7-3HGQ8N6C7 128 aa11.54□□□□□ -0.56
SMARCD3-206ENST00000470588 PRR34Q9NV39 138 aa11.54□□□□□ -0.56
SMARCD3-206ENST00000470588 NANOS2P60321 138 aaKnown RBP11.54□□□□□ -0.56
SMARCD3-206ENST00000470588 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
SMARCD3-206ENST00000470588 MGAM2Q2M2H8 2515 aa11.53□□□□□ -0.56
SMARCD3-206ENST00000470588 ATXN8Q156A1 80 aa11.53□□□□□ -0.56
SMARCD3-206ENST00000470588 MALP21145 153 aa11.52□□□□□ -0.57
SMARCD3-206ENST00000470588 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
SMARCD3-206ENST00000470588 FOXI1Q12951 378 aa11.52□□□□□ -0.57
SMARCD3-206ENST00000470588 KRTAP21-3Q3LHN1 58 aa11.52□□□□□ -0.57
SMARCD3-206ENST00000470588 KLK12Q9UKR0 248 aa11.52□□□□□ -0.57
SMARCD3-206ENST00000470588 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 DEFB131BA0A096LNP1 70 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 CXCL5P42830 114 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 KIAA0087Q14695 138 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 MTURNQ8N3F0 131 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 CKS1BP61024 79 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 ETDBQ3ZM63 59 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 B9D2Q9BPU9 175 aa11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 KLK5Q9Y337 293 aaPredicted RBP11.51□□□□□ -0.57
SMARCD3-206ENST00000470588 CFAP161Q6P656 301 aa11.5□□□□□ -0.57
SMARCD3-206ENST00000470588 TRAV13-2A0A0B4J235 113 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 TRAV10A0A0B4J240 114 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 M0QXV9 152 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 ENHOQ6UWT2 76 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 CBY1Q9Y3M2 126 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 PFN2P35080 140 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 CCL18P55774 89 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 SND1-IT1Q9HBX3 110 aa11.49□□□□□ -0.57
SMARCD3-206ENST00000470588 J3QR89 54 aa11.47□□□□□ -0.57
SMARCD3-206ENST00000470588 COX17Q14061 63 aa11.47□□□□□ -0.57
SMARCD3-206ENST00000470588 LINC01620Q4KN68 170 aa11.47□□□□□ -0.57
SMARCD3-206ENST00000470588 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
SMARCD3-206ENST00000470588 C9JAW5 83 aa11.46□□□□□ -0.57
SMARCD3-206ENST00000470588 ESRGQ1W209 222 aa11.46□□□□□ -0.57
SMARCD3-206ENST00000470588 CRPP02741 224 aa11.46□□□□□ -0.58
SMARCD3-206ENST00000470588 LINC01600Q96MT4 127 aa11.46□□□□□ -0.58
SMARCD3-206ENST00000470588 VPS25Q9BRG1 176 aa11.46□□□□□ -0.58
SMARCD3-206ENST00000470588 SLC25A20O43772 301 aa11.45□□□□□ -0.58
SMARCD3-206ENST00000470588 WFDC10BQ8IUB3 73 aa11.45□□□□□ -0.58
SMARCD3-206ENST00000470588 UBE2WQ96B02 151 aa11.44□□□□□ -0.58
SMARCD3-206ENST00000470588 IGKV2-28A0A075B6P5 120 aa11.44□□□□□ -0.58
SMARCD3-206ENST00000470588 LST1O00453 97 aa11.44□□□□□ -0.58
SMARCD3-206ENST00000470588 IGKV2D-28P01615 120 aa11.44□□□□□ -0.58
SMARCD3-206ENST00000470588 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
SMARCD3-206ENST00000470588 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
SMARCD3-206ENST00000470588 TEN1Q86WV5 123 aa11.43□□□□□ -0.58
SMARCD3-206ENST00000470588 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
SMARCD3-206ENST00000470588 TENM3Q9P273 2699 aa11.43□□□□□ -0.58
SMARCD3-206ENST00000470588 SPAG11BQ08648 103 aa11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 CLEC2BQ92478 149 aa11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 RPL28P46779 137 aaKnown RBP11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 LINC00337Q8N6G1 96 aa11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 MUC7Q8TAX7 377 aa11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 PPDPFLQ8WWR9 84 aa11.41□□□□□ -0.58
SMARCD3-206ENST00000470588 LINC01556Q5JQF7 62 aa11.4□□□□□ -0.58
SMARCD3-206ENST00000470588 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
SMARCD3-206ENST00000470588 H3BT86 120 aa11.37□□□□□ -0.59
SMARCD3-206ENST00000470588 NDUFC2O95298 119 aa11.37□□□□□ -0.59
SMARCD3-206ENST00000470588 KRTAP26-1Q6PEX3 210 aa11.37□□□□□ -0.59
SMARCD3-206ENST00000470588 UNQ6190/PRO20217Q6UXQ8 127 aa11.37□□□□□ -0.59
SMARCD3-206ENST00000470588 GVQW2A0A096LPI5 108 aaPredicted RBP11.36□□□□□ -0.59
SMARCD3-206ENST00000470588 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
SMARCD3-206ENST00000470588 NTN5Q8WTR8 489 aaPredicted RBP11.36□□□□□ -0.59
SMARCD3-206ENST00000470588 C9orf116Q5BN46 136 aaPredicted RBP11.35□□□□□ -0.59
SMARCD3-206ENST00000470588 C10orf25Q5T742 122 aa11.35□□□□□ -0.59
SMARCD3-206ENST00000470588 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
SMARCD3-206ENST00000470588 HUWE1Q7Z6Z7 4374 aaKnown RBP11.35□□□□□ -0.59
SMARCD3-206ENST00000470588 TRACP01848 142 aa11.34□□□□□ -0.59
SMARCD3-206ENST00000470588 DNAH10OSP0CZ25 163 aa11.34□□□□□ -0.59
SMARCD3-206ENST00000470588 H0YGX0 51 aa11.33□□□□□ -0.59
SMARCD3-206ENST00000470588 OR13C6PQ8NH95 151 aa11.33□□□□□ -0.59
SMARCD3-206ENST00000470588 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
SMARCD3-206ENST00000470588 C1orf43Q9BWL3 253 aa11.32□□□□□ -0.6
SMARCD3-206ENST00000470588 ZNF561-AS1K7EIQ3 104 aa11.31□□□□□ -0.6
SMARCD3-206ENST00000470588 F8WDY8 70 aa11.3□□□□□ -0.6
SMARCD3-206ENST00000470588 C2orf48Q96LS8 159 aa11.29□□□□□ -0.6
SMARCD3-206ENST00000470588 LINC00588Q9Y4M8 146 aa11.29□□□□□ -0.6
SMARCD3-206ENST00000470588 C6orf48Q9UBA6 75 aa11.28□□□□□ -0.6
SMARCD3-206ENST00000470588 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
SMARCD3-206ENST00000470588 TMEM126AQ9H061 195 aa11.28□□□□□ -0.6
SMARCD3-206ENST00000470588 DNAH9Q9NYC9 4486 aa11.27□□□□□ -0.6
SMARCD3-206ENST00000470588 IGKV2D-24A0A075B6R9 120 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms