RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TRBV30A0A0K0K1B3 111 aa8.71□□□□□ -1.02
COMMD3-208ENST00000470045 SERTAD4-AS1Q5TG53 156 aa8.71□□□□□ -1.02
COMMD3-208ENST00000470045 Q6ZRP5 223 aa8.71□□□□□ -1.02
COMMD3-208ENST00000470045 ERASQ7Z444 233 aa8.71□□□□□ -1.02
COMMD3-208ENST00000470045 LINC01549A6NIU2 74 aa8.7□□□□□ -1.02
COMMD3-208ENST00000470045 SEC11AP67812 179 aa8.7□□□□□ -1.02
COMMD3-208ENST00000470045 C2orf82Q6UX34 121 aa8.7□□□□□ -1.02
COMMD3-208ENST00000470045 RPS10P5Q9NQ39 176 aa8.7□□□□□ -1.02
COMMD3-208ENST00000470045 HMCN2Q8NDA2 5059 aa8.7□□□□□ -1.02
COMMD3-208ENST00000470045 HERVK_113P63121 156 aa8.69□□□□□ -1.02
COMMD3-208ENST00000470045 SRSF9Q13242 221 aaKnown RBP eCLIP8.69□□□□□ -1.02
COMMD3-208ENST00000470045 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
COMMD3-208ENST00000470045 MRPL18Q9H0U6 180 aaKnown RBP8.69□□□□□ -1.02
COMMD3-208ENST00000470045 Q8IZM0 81 aa8.68□□□□□ -1.02
COMMD3-208ENST00000470045 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
COMMD3-208ENST00000470045 CDKN2A-AS1Q9UH64 79 aa8.68□□□□□ -1.02
COMMD3-208ENST00000470045 NDUFC2-KCTD14E9PQ53 114 aa8.67□□□□□ -1.02
COMMD3-208ENST00000470045 FABP9Q0Z7S8 132 aa8.67□□□□□ -1.02
COMMD3-208ENST00000470045 PHF5AQ7RTV0 110 aaKnown RBP8.67□□□□□ -1.02
COMMD3-208ENST00000470045 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
COMMD3-208ENST00000470045 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
COMMD3-208ENST00000470045 KRTAP7-1Q8IUC3 87 aa8.66□□□□□ -1.02
COMMD3-208ENST00000470045 PACRGQ96M98 296 aaPredicted RBP8.66□□□□□ -1.02
COMMD3-208ENST00000470045 PSORS1C2Q9UIG4 136 aa8.66□□□□□ -1.02
COMMD3-208ENST00000470045 IGLV5-45A0A087WSX0 123 aa8.65□□□□□ -1.02
COMMD3-208ENST00000470045 PRSS2P07478 247 aa8.65□□□□□ -1.02
COMMD3-208ENST00000470045 GAGE2EQ4V326 116 aa8.65□□□□□ -1.02
COMMD3-208ENST00000470045 FA2HQ7L5A8 372 aa8.65□□□□□ -1.02
COMMD3-208ENST00000470045 GEMIN7Q9H840 131 aaKnown RBP8.65□□□□□ -1.02
COMMD3-208ENST00000470045 GAGE2DQ9UEU5 116 aa8.65□□□□□ -1.02
COMMD3-208ENST00000470045 TINCRA0A1B0GVN0 87 aa8.64□□□□□ -1.03
COMMD3-208ENST00000470045 SMIM1B2RUZ4 78 aa8.64□□□□□ -1.03
COMMD3-208ENST00000470045 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
COMMD3-208ENST00000470045 A0A096LNJ9 63 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 APOC3P02656 99 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 CKS1BP61024 79 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 C6orf226Q5I0X4 101 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
COMMD3-208ENST00000470045 FAM19A5Q7Z5A7 132 aaPredicted RBP8.63□□□□□ -1.03
COMMD3-208ENST00000470045 KRTAP11-1Q8IUC1 163 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 URB1-AS1Q96HZ7 61 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 CST9LQ9H4G1 147 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 SMCO4Q9NRQ5 59 aa8.63□□□□□ -1.03
COMMD3-208ENST00000470045 TNXBP22105 4242 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 F8VRH5 84 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 SNAPINO95295 136 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 CXCL5P42830 114 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 PMVKQ15126 192 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 SVBPQ8N300 66 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
COMMD3-208ENST00000470045 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
COMMD3-208ENST00000470045 PDZD11Q5EBL8 140 aa8.61□□□□□ -1.03
COMMD3-208ENST00000470045 PLA2G2DQ9UNK4 145 aa8.61□□□□□ -1.03
COMMD3-208ENST00000470045 M0QXV9 152 aa8.6□□□□□ -1.03
COMMD3-208ENST00000470045 C1orf137Q5JT78 98 aa8.6□□□□□ -1.03
COMMD3-208ENST00000470045 YPEL4Q96NS1 127 aa8.6□□□□□ -1.03
COMMD3-208ENST00000470045 LINC00614P0C842 121 aa8.59□□□□□ -1.03
COMMD3-208ENST00000470045 KRTAP10-8P60410 259 aa8.59□□□□□ -1.03
COMMD3-208ENST00000470045 ODF1Q14990 250 aa8.59□□□□□ -1.03
COMMD3-208ENST00000470045 IGLV7-43P04211 117 aa8.58□□□□□ -1.04
COMMD3-208ENST00000470045 COX7B2Q8TF08 81 aa8.58□□□□□ -1.04
COMMD3-208ENST00000470045 HBDP02042 147 aa8.57□□□□□ -1.04
COMMD3-208ENST00000470045 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
COMMD3-208ENST00000470045 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
COMMD3-208ENST00000470045 XAGE1AQ9HD64 81 aa8.56□□□□□ -1.04
COMMD3-208ENST00000470045 IGLV5-39A0A0G2JS06 123 aa8.55□□□□□ -1.04
COMMD3-208ENST00000470045 RAB5BP61020 215 aa8.55□□□□□ -1.04
COMMD3-208ENST00000470045 PMCHL1Q16048 86 aa8.55□□□□□ -1.04
COMMD3-208ENST00000470045 H3BRM9 83 aa8.54□□□□□ -1.04
COMMD3-208ENST00000470045 ZNF22P17026 224 aaPredicted RBP8.54□□□□□ -1.04
COMMD3-208ENST00000470045 UBE2BP63146 152 aa8.54□□□□□ -1.04
COMMD3-208ENST00000470045 DIRC1Q969H9 104 aa8.54□□□□□ -1.04
COMMD3-208ENST00000470045 H0Y9J4 135 aa8.53□□□□□ -1.04
COMMD3-208ENST00000470045 ATP5LO75964 103 aa8.53□□□□□ -1.04
COMMD3-208ENST00000470045 TP73-AS1Q9UF72 201 aa8.53□□□□□ -1.04
COMMD3-208ENST00000470045 C22orf24Q9Y442 160 aa8.53□□□□□ -1.04
COMMD3-208ENST00000470045 NDUFA6P56556 154 aa8.51□□□□□ -1.05
COMMD3-208ENST00000470045 C11orf86A6NJI1 115 aa8.5□□□□□ -1.05
COMMD3-208ENST00000470045 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
COMMD3-208ENST00000470045 MRPL55Q7Z7F7 128 aaKnown RBP8.5□□□□□ -1.05
COMMD3-208ENST00000470045 CBLN2Q8IUK8 224 aa8.5□□□□□ -1.05
COMMD3-208ENST00000470045 CHCHD1Q96BP2 118 aaKnown RBP8.5□□□□□ -1.05
COMMD3-208ENST00000470045 IGLV5-37A0A075B6J1 123 aa8.49□□□□□ -1.05
COMMD3-208ENST00000470045 NUPR1O60356 82 aa8.49□□□□□ -1.05
COMMD3-208ENST00000470045 KRTAP1-4P0C5Y4 121 aa8.49□□□□□ -1.05
COMMD3-208ENST00000470045 BAGE3Q86Y29 109 aa8.49□□□□□ -1.05
COMMD3-208ENST00000470045 UBR4Q5T4S7 5183 aa8.47□□□□□ -1.05
COMMD3-208ENST00000470045 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
COMMD3-208ENST00000470045 ZNF861PO60384 105 aa8.46□□□□□ -1.06
COMMD3-208ENST00000470045 PRR26Q8N8Z3 221 aa8.46□□□□□ -1.06
COMMD3-208ENST00000470045 CHTOPQ9Y3Y2 248 aaKnown RBP8.46□□□□□ -1.06
COMMD3-208ENST00000470045 IGLV1-50A0A075B6I6 118 aa8.45□□□□□ -1.06
COMMD3-208ENST00000470045 TMEM170BQ5T4T1 132 aa8.45□□□□□ -1.06
COMMD3-208ENST00000470045 SFTA2Q6UW10 78 aa8.45□□□□□ -1.06
COMMD3-208ENST00000470045 IFI27L1Q96BM0 104 aa8.45□□□□□ -1.06
COMMD3-208ENST00000470045 LINC00167Q96N53 147 aa8.45□□□□□ -1.06
COMMD3-208ENST00000470045 KRTAP4-11Q9BYQ6 195 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms