RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 FAIMQ9NVQ4 179 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 PXDNQ92626 1479 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 SSC5DA1L4H1 1573 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 MYOM1P52179 1685 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 KIF21AQ7Z4S6 1674 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 RGPD3A6NKT7 1758 aaPredicted RBP0.64□□□□□ -2.31
VPS8-220ENST00000469713 PDCD11Q14690 1871 aaKnown RBP0.64□□□□□ -2.31
VPS8-220ENST00000469713 GOLGB1Q14789 3259 aaKnown RBP0.64□□□□□ -2.31
VPS8-220ENST00000469713 MUC3AQ02505 3323 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 TROQ12816 1431 aaPredicted RBP0.64□□□□□ -2.31
VPS8-220ENST00000469713 NSD3Q9BZ95 1437 aa0.64□□□□□ -2.31
VPS8-220ENST00000469713 WDR87Q6ZQQ6 2873 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 RB1CC1Q8TDY2 1594 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 GVQW2A0A096LPI5 108 aaPredicted RBP0.63□□□□□ -2.31
VPS8-220ENST00000469713 F8VRH5 84 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 M0R3E3 92 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 ATOX1O00244 68 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 ASIPP42127 132 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 SPINT3P49223 89 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 RPL37P61927 97 aaKnown RBP0.63□□□□□ -2.31
VPS8-220ENST00000469713 PYY3Q5JQD4 70 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 TMEM170BQ5T4T1 132 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 VMO1Q7Z5L0 202 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 SERP2Q8N6R1 65 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 C20orf78Q9BR46 151 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 UQCR10Q9UDW1 63 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 CACFD1Q9UGQ2 172 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 ARL2-SNX15V9GYD0 113 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 SCRIBQ14160 1630 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 HMGXB3Q12766 1538 aa0.63□□□□□ -2.31
VPS8-220ENST00000469713 CDK13Q14004 1512 aaKnown RBP0.63□□□□□ -2.31
VPS8-220ENST00000469713 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.63□□□□□ -2.31
VPS8-220ENST00000469713 KIAA0100Q14667 2235 aaKnown RBP0.62□□□□□ -2.31
VPS8-220ENST00000469713 MED13LQ71F56 2210 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 SPTBN5Q9NRC6 3674 aaKnown RBP0.62□□□□□ -2.31
VPS8-220ENST00000469713 PI4KAP42356 2102 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 MED14O60244 1454 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 MLH3Q9UHC1 1453 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 TRBV7-7A0A0K0K1E9 115 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 TMEM14DPA8MWL7 114 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 G3V318 75 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 H7BZZ5 65 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 TRAPPC2P0DI81 140 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 TRAPPC2BP0DI82 140 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 SPINK13Q1W4C9 94 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 Q6ZRX8 168 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 BAGE2Q86Y30 109 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 FAM223AQ8IWN6 122 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 AMELXQ99217 191 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 TRGV9Q99603 122 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 NXT2Q9NPJ8 142 aaKnown RBP0.62□□□□□ -2.31
VPS8-220ENST00000469713 LINC01558Q9Y6Z2 57 aa0.62□□□□□ -2.31
VPS8-220ENST00000469713 PLXNB2O15031 1838 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 UBR1Q8IWV7 1749 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 EHBP1L1Q8N3D4 1523 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 LOC285095A0A1B0GVY8 99 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 FAM223BA6NKX1 122 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 F2Z2F3 143 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 SYS1-DBNDD2H3BUS1 97 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 NMBP08949 121 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 COX6CP09669 75 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 CFAP126Q5VTH2 177 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 SMIM11BQ8TCY0 68 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 LINC00472Q9H8W2 130 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 HIGD1BQ9P298 99 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 SPTA1P02549 2419 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 CLTCQ00610 1675 aaKnown RBP0.61□□□□□ -2.31
VPS8-220ENST00000469713 WNK3Q9BYP7 1800 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 NRXN1Q9ULB1 1477 aa0.61□□□□□ -2.31
VPS8-220ENST00000469713 MYH4Q9Y623 1939 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 SPAG17Q6Q759 2223 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 K7EP34 96 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 UQCR11O14957 56 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 NDUFC1O43677 76 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 TDRG1Q3Y452 100 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 C6orf52Q5T4I8 152 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 MYO7BQ6PIF6 2116 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 SPATA8Q6RVD6 105 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 FDCSPQ8NFU4 85 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 C10orf95Q9H7T3 257 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 LOC400499M0QZD8 3231 aa0.6□□□□□ -2.31
VPS8-220ENST00000469713 VPS13AQ96RL7 3174 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 ABCA1O95477 2261 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 HERC2O95714 4834 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 NUP188Q5SRE5 1749 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 DIP2CQ9Y2E4 1556 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 CACNA1HO95180 2353 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 FRYQ5TBA9 3013 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 TRBV25-1A0A075B6N4 114 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 A0A0D9SG42 100 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 GYPAP02724 150 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 GCHFRP30047 84 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 SPINK9Q5DT21 86 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 PRR15LQ9BU68 103 aa0.59□□□□□ -2.31
VPS8-220ENST00000469713 PPLO60437 1756 aa0.59□□□□□ -2.32
VPS8-220ENST00000469713 KDM3BQ7LBC6 1761 aa0.59□□□□□ -2.32
VPS8-220ENST00000469713 FREM2Q5SZK8 3169 aa0.59□□□□□ -2.32
VPS8-220ENST00000469713 NF1P21359 2839 aa0.58□□□□□ -2.32
VPS8-220ENST00000469713 EDC4Q6P2E9 1401 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms