RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PLA2G2AP14555 144 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 MAP6D1Q9H9H5 199 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 ASPMQ8IZT6 3477 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 ZFHX4Q86UP3 3567 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 ANKHD1Q8IWZ3 2542 aaKnown RBP6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 NCOR2Q9Y618 2525 aa6.2□□□□□ -1.42
SMARCE1-207ENST00000469334 IGLV4-60A0A075B6I1 120 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 Q6ZRP5 223 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 SCXQ7RTU7 201 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 TRBV6-8A0A0A6YYG3 113 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 LCE6AA0A183 80 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 COX7BP24311 80 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 CD164L2Q6UWJ8 174 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 Q6ZQY7 126 aa6.19□□□□□ -1.42
SMARCE1-207ENST00000469334 TACC2O95359 2948 aa6.18□□□□□ -1.42
SMARCE1-207ENST00000469334 EPG5Q9HCE0 2579 aa6.18□□□□□ -1.42
SMARCE1-207ENST00000469334 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-207ENST00000469334 SPENQ96T58 3664 aaKnown RBP6.18□□□□□ -1.42
SMARCE1-207ENST00000469334 IGHV4-30-2A0A087WSY4 118 aa6.18□□□□□ -1.42
SMARCE1-207ENST00000469334 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
SMARCE1-207ENST00000469334 PRR3P79522 188 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 OTOGLQ3ZCN5 2332 aa6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 COL6A6A6NMZ7 2263 aa6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 CCL24O00175 119 aa6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 IGHV4-59P01825 116 aa6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 UBE2E2Q96LR5 201 aa6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 HIGD2AQ9BW72 106 aa6.17□□□□□ -1.42
SMARCE1-207ENST00000469334 IGLV6-57P01721 117 aa6.16□□□□□ -1.42
SMARCE1-207ENST00000469334 CHD8Q9HCK8 2581 aa6.16□□□□□ -1.42
SMARCE1-207ENST00000469334 UBE2BP63146 152 aa6.16□□□□□ -1.42
SMARCE1-207ENST00000469334 STHQ8IWL8 128 aa6.16□□□□□ -1.42
SMARCE1-207ENST00000469334 CYP4F30PQ9H0H9 118 aa6.16□□□□□ -1.42
SMARCE1-207ENST00000469334 RETNQ9HD89 108 aa6.16□□□□□ -1.42
SMARCE1-207ENST00000469334 C1orf64Q8NEQ6 169 aa6.15□□□□□ -1.42
SMARCE1-207ENST00000469334 SORL1Q92673 2214 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 ESM1Q9NQ30 184 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 TRGV2A0A075B6R0 118 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 TRAV22A0A0B4J277 110 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 KIAA0087Q14695 138 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 DIRC1Q969H9 104 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 CEP295Q9C0D2 2601 aa6.14□□□□□ -1.43
SMARCE1-207ENST00000469334 KTN1-AS1Q86SY8 53 aa6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 ACACBO00763 2458 aa6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 CSMD1Q96PZ7 3565 aa6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 ADORA2A-AS1P86434 159 aa6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 C10orf99Q6UWK7 81 aa6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 ZCCHC13Q8WW36 166 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 C16orf74Q96GX8 76 aa6.13□□□□□ -1.43
SMARCE1-207ENST00000469334 ABCA2Q9BZC7 2435 aa6.12□□□□□ -1.43
SMARCE1-207ENST00000469334 TRGV4A0A0C4DH28 118 aa6.12□□□□□ -1.43
SMARCE1-207ENST00000469334 LOC100131303A0A0U1RQF7 123 aa6.12□□□□□ -1.43
SMARCE1-207ENST00000469334 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
SMARCE1-207ENST00000469334 LAMA5O15230 3695 aa6.12□□□□□ -1.43
SMARCE1-207ENST00000469334 A0A1B0GW54 56 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 NOP10Q9NPE3 64 aaKnown RBP6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 CELA1Q9UNI1 258 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 IGHV4-61A0A0C4DH41 118 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 A0A1W2PPR1 153 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 UBE2AP49459 152 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 Q8NDZ9 215 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 LOC400499M0QZD8 3231 aa6.11□□□□□ -1.43
SMARCE1-207ENST00000469334 C19orf84I3L1E1 186 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 PSPHP1O15172 72 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 IGHV4-30-4P0DP06 118 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 SLURP1P55000 103 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 CHD6Q8TD26 2715 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 PSCAO43653 123 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 NDUFS5O43920 106 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 ELOF1P60002 83 aaKnown RBP6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 SYCNQ0VAF6 134 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 Q8N9L7 120 aa6.1□□□□□ -1.43
SMARCE1-207ENST00000469334 NDUFB1O75438 58 aa6.09□□□□□ -1.43
SMARCE1-207ENST00000469334 HIGD2BQ4VC39 106 aa6.09□□□□□ -1.43
SMARCE1-207ENST00000469334 LINC00588Q9Y4M8 146 aa6.09□□□□□ -1.43
SMARCE1-207ENST00000469334 ODF3L2Q3SX64 289 aa6.08□□□□□ -1.44
SMARCE1-207ENST00000469334 SMIM29Q86T20 159 aa6.08□□□□□ -1.44
SMARCE1-207ENST00000469334 ZNF73O43830 326 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 MSMBP08118 114 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 LINC01356Q8N9X3 169 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 DCHS2Q6V1P9 2916 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 KMT2BQ9UMN6 2715 aaPredicted RBP6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 ETDCA0A1B0GVM5 59 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 LRCOL1A6NCL2 159 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 LINC00612Q8N6U2 182 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 FAM30AQ9NZY2 134 aa6.07□□□□□ -1.44
SMARCE1-207ENST00000469334 USP24Q9UPU5 2620 aa6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 ADGRG4Q8IZF6 3080 aa6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 A8MUN3 132 aa6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 C9orf116Q5BN46 136 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 Q5VV11 94 aa6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 C4orf3Q8WVX3 66 aa6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 LIMD2Q9BT23 127 aa6.06□□□□□ -1.44
SMARCE1-207ENST00000469334 LINC00269Q8N2A0 174 aa6.05□□□□□ -1.44
SMARCE1-207ENST00000469334 GVQW2A0A096LPI5 108 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms