RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ELOF1P60002 83 aaKnown RBP3.42□□□□□ -1.86
SF3B1-207ENST00000468925 KRTAP10-6P60371 365 aaPredicted RBP3.42□□□□□ -1.86
SF3B1-207ENST00000468925 SS18Q15532 418 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 LPAL2Q16609 132 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 ECSCRQ19T08 205 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 LINC00242Q5T6M2 205 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 IGFL2Q6UWQ7 119 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 LYPD2Q6UXB3 125 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 CLEC19AQ6UXS0 136 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 Q6ZTC4 211 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 LINC00337Q8N6G1 96 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 MPLKIPQ8TAP9 179 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 COX7B2Q8TF08 81 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 BPESC1Q9GZL8 116 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 ZNF580Q9UK33 172 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 WDFY3Q8IZQ1 3526 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 ABCA12Q86UK0 2595 aa3.42□□□□□ -1.86
SF3B1-207ENST00000468925 ITPR3Q14573 2671 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 DOPEY1Q5JWR5 2465 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 IGHV3-35A0A0C4DH35 117 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 LY6HO94772 140 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 IGHV3-53P01767 116 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 COX7A1P24310 79 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 HAMPP81172 84 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 COX17Q14061 63 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 Q8N9W7 124 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 SNURFQ9Y675 71 aa3.41□□□□□ -1.86
SF3B1-207ENST00000468925 SPTA1P02549 2419 aa3.4□□□□□ -1.86
SF3B1-207ENST00000468925 A0A087X002 238 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 LINC01565O15544 149 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3-23P01764 117 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV4-31P0DP07 118 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 HOXD3P31249 432 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-207ENST00000468925 PROK1P58294 105 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 LINC00158P58513 81 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 NTM-AS1Q6ZSK4 140 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 MUC4Q99102 2169 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 S4R3C0 116 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 AKAP13Q12802 2813 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 FREM2Q5SZK8 3169 aa3.4□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3OR16-12A0A075B7B8 117 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 TRBV6-8A0A0A6YYG3 113 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 LCE6AA0A183 80 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 CCL18P55774 89 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 NDPQ00604 133 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 UNQ9165/PRO28630Q6UXU0 137 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 Q9UF83 564 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 MED13Q9UHV7 2174 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 ARHGAP32A7KAX9 2087 aa3.39□□□□□ -1.87
SF3B1-207ENST00000468925 SPTAN1Q13813 2472 aaKnown RBP3.38□□□□□ -1.87
SF3B1-207ENST00000468925 UBR5O95071 2799 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-207ENST00000468925 TRAV10A0A0B4J240 114 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3-38A0A0C4DH36 116 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 H3BPC8 53 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 M0R378 163 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 ASB16-AS1Q495Z4 193 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.38□□□□□ -1.87
SF3B1-207ENST00000468925 RHPN1-AS1Q9BWJ2 59 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 CDC42SE2Q9NRR3 84 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 RBM12B-AS1Q9P1G2 102 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 LINC00588Q9Y4M8 146 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 COL12A1Q99715 3063 aa3.38□□□□□ -1.87
SF3B1-207ENST00000468925 LAMA5O15230 3695 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.37□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV4-28A0A0C4DH34 117 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 LOC100131303A0A0U1RQF7 123 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 ATP6V0E1O15342 81 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 C9orf129Q5T035 196 aaKnown RBP3.37□□□□□ -1.87
SF3B1-207ENST00000468925 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 LINC00575Q6W349 94 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 LCA10Q71F78 164 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 C11orf72Q8NBR9 251 aa3.37□□□□□ -1.87
SF3B1-207ENST00000468925 TRAV22A0A0B4J277 110 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 A8MTW9 85 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 PRB4P10163 310 aaPredicted RBP3.36□□□□□ -1.87
SF3B1-207ENST00000468925 COX7BP24311 80 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 COX6A2Q02221 97 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 Q6ZRP5 223 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 C7orf65Q6ZTY9 151 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 Q8IZM0 81 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 LINC00269Q8N2A0 174 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 TMEM105Q8N8V8 129 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 SPANXA2-OT1Q8N9U9 137 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 WFDC9Q8NEX5 89 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 FBN3Q75N90 2809 aa3.36□□□□□ -1.87
SF3B1-207ENST00000468925 URB1O60287 2271 aaKnown RBP3.35□□□□□ -1.87
SF3B1-207ENST00000468925 POLEQ07864 2286 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 WNK2Q9Y3S1 2297 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 IGHV4-30-2A0A087WSY4 118 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 K7EQG2 157 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 APOC4P55056 127 aa3.35□□□□□ -1.87
SF3B1-207ENST00000468925 BSPH1Q075Z2 132 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms