RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 HIVEP3Q5T1R4 2406 aa0.18□□□□□ -2.38
PRPF40A-205ENST00000467114 NUP188Q5SRE5 1749 aa0.18□□□□□ -2.38
PRPF40A-205ENST00000467114 DMBT1Q9UGM3 2413 aaPredicted RBP0.17□□□□□ -2.38
PRPF40A-205ENST00000467114 PLEKHH2Q8IVE3 1493 aa0.17□□□□□ -2.38
PRPF40A-205ENST00000467114 NLRP1Q9C000 1473 aa0.17□□□□□ -2.38
PRPF40A-205ENST00000467114 H3BQF6 201 aa0.17□□□□□ -2.38
PRPF40A-205ENST00000467114 SPRR1BP22528 89 aa0.17□□□□□ -2.38
PRPF40A-205ENST00000467114 PKIAP61925 76 aa0.17□□□□□ -2.38
PRPF40A-205ENST00000467114 ABCC10Q5T3U5 1492 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 SETBP1Q9Y6X0 1596 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 A0A1B0GU69 56 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 SYS1-DBNDD2H3BUS1 97 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 DEFB107AQ8IZN7 70 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 SNHG12Q9BXW3 62 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 CSMD3Q7Z407 3707 aa0.16□□□□□ -2.38
PRPF40A-205ENST00000467114 SPTBN1Q01082 2364 aaKnown RBP0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 UQCRHLA0A096LP55 91 aa0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 H0Y9P7 68 aa0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 K7EQZ3 153 aa0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 ARMS2P0C7Q2 107 aa0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 C6orf201Q7Z4U5 140 aa0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 XRN1Q8IZH2 1706 aaKnown RBP0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 PIEZO2Q9H5I5 2752 aa0.15□□□□□ -2.39
PRPF40A-205ENST00000467114 ABCA2Q9BZC7 2435 aa0.14□□□□□ -2.39
PRPF40A-205ENST00000467114 TRBV7-7A0A0K0K1E9 115 aa0.14□□□□□ -2.39
PRPF40A-205ENST00000467114 GNGT1P63211 74 aa0.14□□□□□ -2.39
PRPF40A-205ENST00000467114 USMG5Q96IX5 58 aa0.14□□□□□ -2.39
PRPF40A-205ENST00000467114 RAPGEF2Q9Y4G8 1499 aa0.14□□□□□ -2.39
PRPF40A-205ENST00000467114 A0A0G2JMZ2 1700 aa0.13□□□□□ -2.39
PRPF40A-205ENST00000467114 ANKRD17O75179 2603 aaKnown RBP0.13□□□□□ -2.39
PRPF40A-205ENST00000467114 DNAJC13O75165 2243 aa0.13□□□□□ -2.39
PRPF40A-205ENST00000467114 COL7A1Q02388 2944 aa0.12□□□□□ -2.39
PRPF40A-205ENST00000467114 NRXN1Q9ULB1 1477 aa0.12□□□□□ -2.39
PRPF40A-205ENST00000467114 NCOR1O75376 2440 aa0.12□□□□□ -2.39
PRPF40A-205ENST00000467114 ZNF720Q7Z2F6 126 aa0.12□□□□□ -2.39
PRPF40A-205ENST00000467114 TSC2P49815 1807 aa0.12□□□□□ -2.39
PRPF40A-205ENST00000467114 KNDC1Q76NI1 1749 aa0.12□□□□□ -2.39
PRPF40A-205ENST00000467114 VWFP04275 2813 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 CCNB3Q8WWL7 1395 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 TENM4Q6N022 2769 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 COX8AP10176 69 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 HMGN3Q15651 99 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 ETDBQ3ZM63 59 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 PSENENQ9NZ42 101 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 CHD6Q8TD26 2715 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 GVINP1Q7Z2Y8 2422 aa0.11□□□□□ -2.39
PRPF40A-205ENST00000467114 MARF1Q9Y4F3 1742 aaKnown RBP0.1□□□□□ -2.39
PRPF40A-205ENST00000467114 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
PRPF40A-205ENST00000467114 ABCC2Q92887 1545 aa0.1□□□□□ -2.39
PRPF40A-205ENST00000467114 FXYD6Q9H0Q3 95 aa0.1□□□□□ -2.39
PRPF40A-205ENST00000467114 F8WEM9 126 aa0.09□□□□□ -2.4
PRPF40A-205ENST00000467114 SPINK4O60575 86 aa0.09□□□□□ -2.4
PRPF40A-205ENST00000467114 ALKAL2Q6UX46 152 aa0.09□□□□□ -2.4
PRPF40A-205ENST00000467114 SPRR2GQ9BYE4 73 aa0.09□□□□□ -2.4
PRPF40A-205ENST00000467114 URB1O60287 2271 aaKnown RBP0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 D6R8Y8 96 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 LEPROTL1O95214 131 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 GYPAP02724 150 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 MUSTN1Q8IVN3 82 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 CRIPTQ9P021 101 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 PAPPA2Q9BXP8 1791 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 KIAA0556O60303 1618 aa0.08□□□□□ -2.4
PRPF40A-205ENST00000467114 PKD1L1Q8TDX9 2849 aa0.07□□□□□ -2.4
PRPF40A-205ENST00000467114 CACNA1AO00555 2505 aa0.07□□□□□ -2.4
PRPF40A-205ENST00000467114 DEFB105AQ8NG35 78 aa0.07□□□□□ -2.4
PRPF40A-205ENST00000467114 HIGD1BQ9P298 99 aa0.07□□□□□ -2.4
PRPF40A-205ENST00000467114 CCDC141Q6ZP82 1450 aa0.07□□□□□ -2.4
PRPF40A-205ENST00000467114 EDC4Q6P2E9 1401 aaKnown RBP0.06□□□□□ -2.4
PRPF40A-205ENST00000467114 CPSF4LA6NMK7 179 aaKnown RBP0.06□□□□□ -2.4
PRPF40A-205ENST00000467114 KLK9Q2XQG4 91 aa0.06□□□□□ -2.4
PRPF40A-205ENST00000467114 Q9H521 79 aa0.06□□□□□ -2.4
PRPF40A-205ENST00000467114 ANKRD26Q9UPS8 1709 aa0.06□□□□□ -2.4
PRPF40A-205ENST00000467114 AKAP12Q02952 1782 aa0.06□□□□□ -2.4
PRPF40A-205ENST00000467114 TARBP1Q13395 1621 aaKnown RBP0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 CSPG4Q6UVK1 2322 aa0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 SHPRHQ149N8 1683 aa0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 PRM1P04553 51 aa0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 C20orf78Q9BR46 151 aa0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 APLNQ9ULZ1 77 aa0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 CLTCQ00610 1675 aaKnown RBP0.05□□□□□ -2.4
PRPF40A-205ENST00000467114 FMN2Q9NZ56 1722 aa0.04□□□□□ -2.4
PRPF40A-205ENST00000467114 EPRSP07814 1512 aaKnown RBP0.04□□□□□ -2.4
PRPF40A-205ENST00000467114 I3L3M4 83 aa0.04□□□□□ -2.4
PRPF40A-205ENST00000467114 SMIM11AP58511 58 aa0.04□□□□□ -2.4
PRPF40A-205ENST00000467114 HUWE1Q7Z6Z7 4374 aaKnown RBP0.04□□□□□ -2.4
PRPF40A-205ENST00000467114 SLIT1O75093 1534 aa0.03□□□□□ -2.4
PRPF40A-205ENST00000467114 ANKRD36A6QL64 1941 aa0.03□□□□□ -2.4
PRPF40A-205ENST00000467114 HMCN2Q8NDA2 5059 aa0.03□□□□□ -2.4
PRPF40A-205ENST00000467114 KMT2AQ03164 3969 aa0.03□□□□□ -2.4
PRPF40A-205ENST00000467114 IGLC2P0DOY2 106 aa0.03□□□□□ -2.4
PRPF40A-205ENST00000467114 IGLC3P0DOY3 106 aa0.03□□□□□ -2.4
PRPF40A-205ENST00000467114 ATP10BO94823 1461 aa0.03□□□□□ -2.41
PRPF40A-205ENST00000467114 MON2Q7Z3U7 1717 aa0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 TNXBP22105 4242 aa0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 LOC730098B7Z3J9 87 aa0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 FANCAO15360 1455 aa0.02□□□□□ -2.41
PRPF40A-205ENST00000467114 ATRQ13535 2644 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 FAT2Q9NYQ8 4349 aa0.01□□□□□ -2.41
PRPF40A-205ENST00000467114 MYCBP2O75592 4640 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms