RNA–Protein interactions for RNA: ENST00000465268.1

MRPL55-225, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-225ENST00000465268 ERASQ7Z444 233 aa9.08□□□□□ -0.96
MRPL55-225ENST00000465268 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
MRPL55-225ENST00000465268 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
MRPL55-225ENST00000465268 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
MRPL55-225ENST00000465268 HERVK_113P63121 156 aa9.07□□□□□ -0.96
MRPL55-225ENST00000465268 FABP9Q0Z7S8 132 aa9.07□□□□□ -0.96
MRPL55-225ENST00000465268 C9orf129Q5T035 196 aaKnown RBP9.07□□□□□ -0.96
MRPL55-225ENST00000465268 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
MRPL55-225ENST00000465268 SMCO4Q9NRQ5 59 aa9.07□□□□□ -0.96
MRPL55-225ENST00000465268 LPAP08519 4548 aa9.06□□□□□ -0.96
MRPL55-225ENST00000465268 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
MRPL55-225ENST00000465268 MRPL18Q9H0U6 180 aaKnown RBP9.06□□□□□ -0.96
MRPL55-225ENST00000465268 APOC3P02656 99 aa9.05□□□□□ -0.96
MRPL55-225ENST00000465268 RAB5BP61020 215 aa9.05□□□□□ -0.96
MRPL55-225ENST00000465268 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
MRPL55-225ENST00000465268 TRBV30A0A0K0K1B3 111 aa9.04□□□□□ -0.96
MRPL55-225ENST00000465268 SCGB3A1Q96QR1 104 aa9.04□□□□□ -0.96
MRPL55-225ENST00000465268 GEMIN7Q9H840 131 aaKnown RBP9.04□□□□□ -0.96
MRPL55-225ENST00000465268 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
MRPL55-225ENST00000465268 M0QXV9 152 aa9.03□□□□□ -0.96
MRPL55-225ENST00000465268 PRSS2P07478 247 aa9.03□□□□□ -0.96
MRPL55-225ENST00000465268 TOMM7Q9P0U1 55 aa9.03□□□□□ -0.96
MRPL55-225ENST00000465268 CDKN2A-AS1Q9UH64 79 aa9.03□□□□□ -0.96
MRPL55-225ENST00000465268 TRAPPC1Q9Y5R8 145 aa9.03□□□□□ -0.96
MRPL55-225ENST00000465268 LINC00469Q8N7U9 141 aa9.02□□□□□ -0.97
MRPL55-225ENST00000465268 PRR26Q8N8Z3 221 aa9.02□□□□□ -0.97
MRPL55-225ENST00000465268 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
MRPL55-225ENST00000465268 CXCL5P42830 114 aa9□□□□□ -0.97
MRPL55-225ENST00000465268 Q8IZM0 81 aa9□□□□□ -0.97
MRPL55-225ENST00000465268 TINCRA0A1B0GVN0 87 aa8.99□□□□□ -0.97
MRPL55-225ENST00000465268 H0Y9J4 135 aa8.99□□□□□ -0.97
MRPL55-225ENST00000465268 LINC00614P0C842 121 aa8.99□□□□□ -0.97
MRPL55-225ENST00000465268 CKS1BP61024 79 aa8.99□□□□□ -0.97
MRPL55-225ENST00000465268 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
MRPL55-225ENST00000465268 XAGE1AQ9HD64 81 aa8.99□□□□□ -0.97
MRPL55-225ENST00000465268 KRTAP1-4P0C5Y4 121 aa8.98□□□□□ -0.97
MRPL55-225ENST00000465268 UBE2BP63146 152 aa8.98□□□□□ -0.97
MRPL55-225ENST00000465268 PMVKQ15126 192 aa8.98□□□□□ -0.97
MRPL55-225ENST00000465268 DIRC1Q969H9 104 aa8.98□□□□□ -0.97
MRPL55-225ENST00000465268 ATP5LO75964 103 aa8.97□□□□□ -0.97
MRPL55-225ENST00000465268 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
MRPL55-225ENST00000465268 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
MRPL55-225ENST00000465268 H3BRM9 83 aa8.96□□□□□ -0.98
MRPL55-225ENST00000465268 PDZD11Q5EBL8 140 aa8.96□□□□□ -0.98
MRPL55-225ENST00000465268 CST9LQ9H4G1 147 aa8.96□□□□□ -0.98
MRPL55-225ENST00000465268 IGLV5-45A0A087WSX0 123 aa8.95□□□□□ -0.98
MRPL55-225ENST00000465268 HBDP02042 147 aa8.95□□□□□ -0.98
MRPL55-225ENST00000465268 C18orf32Q8TCD1 76 aa8.95□□□□□ -0.98
MRPL55-225ENST00000465268 F8VRH5 84 aa8.94□□□□□ -0.98
MRPL55-225ENST00000465268 SFTA2Q6UW10 78 aa8.94□□□□□ -0.98
MRPL55-225ENST00000465268 CHCHD1Q96BP2 118 aaKnown RBP8.94□□□□□ -0.98
MRPL55-225ENST00000465268 SPINK8P0C7L1 97 aa8.92□□□□□ -0.98
MRPL55-225ENST00000465268 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
MRPL55-225ENST00000465268 URB1-AS1Q96HZ7 61 aa8.91□□□□□ -0.98
MRPL55-225ENST00000465268 A0A096LNJ9 63 aa8.9□□□□□ -0.98
MRPL55-225ENST00000465268 ZNF861PO60384 105 aa8.9□□□□□ -0.98
MRPL55-225ENST00000465268 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
MRPL55-225ENST00000465268 IGLV1-50A0A075B6I6 118 aa8.89□□□□□ -0.99
MRPL55-225ENST00000465268 IGLC3P0DOY3 106 aa8.88□□□□□ -0.99
MRPL55-225ENST00000465268 MRPL55Q7Z7F7 128 aaKnown RBP8.88□□□□□ -0.99
MRPL55-225ENST00000465268 RPL37AP8A6NKH3 93 aa8.87□□□□□ -0.99
MRPL55-225ENST00000465268 NDUFA6P56556 154 aa8.87□□□□□ -0.99
MRPL55-225ENST00000465268 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-225ENST00000465268 LINC00167Q96N53 147 aa8.87□□□□□ -0.99
MRPL55-225ENST00000465268 TP73-AS1Q9UF72 201 aa8.87□□□□□ -0.99
MRPL55-225ENST00000465268 GAGE10A6NGK3 116 aa8.86□□□□□ -0.99
MRPL55-225ENST00000465268 NUPR1O60356 82 aa8.86□□□□□ -0.99
MRPL55-225ENST00000465268 SCO1O75880 301 aa8.86□□□□□ -0.99
MRPL55-225ENST00000465268 PMCHL1Q16048 86 aa8.86□□□□□ -0.99
MRPL55-225ENST00000465268 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
MRPL55-225ENST00000465268 HSBP1O75506 76 aa8.85□□□□□ -0.99
MRPL55-225ENST00000465268 COX17Q14061 63 aa8.85□□□□□ -0.99
MRPL55-225ENST00000465268 BAGE3Q86Y29 109 aa8.85□□□□□ -0.99
MRPL55-225ENST00000465268 BCE1O60756 84 aa8.84□□□□□ -0.99
MRPL55-225ENST00000465268 A0A087X002 238 aa8.83□□□□□ -1
MRPL55-225ENST00000465268 IGLV5-39A0A0G2JS06 123 aa8.83□□□□□ -1
MRPL55-225ENST00000465268 ZNF22P17026 224 aaPredicted RBP8.83□□□□□ -1
MRPL55-225ENST00000465268 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
MRPL55-225ENST00000465268 IGLV5-37A0A075B6J1 123 aa8.82□□□□□ -1
MRPL55-225ENST00000465268 CBLN2Q8IUK8 224 aa8.82□□□□□ -1
MRPL55-225ENST00000465268 ANAPC11Q9NYG5 84 aa8.82□□□□□ -1
MRPL55-225ENST00000465268 CHTOPQ9Y3Y2 248 aaKnown RBP8.82□□□□□ -1
MRPL55-225ENST00000465268 PFN2P35080 140 aa8.81□□□□□ -1
MRPL55-225ENST00000465268 Q8NDZ9 215 aa8.81□□□□□ -1
MRPL55-225ENST00000465268 LINC00587B1AMM8 73 aa8.8□□□□□ -1
MRPL55-225ENST00000465268 TMEM170BQ5T4T1 132 aa8.8□□□□□ -1
MRPL55-225ENST00000465268 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
MRPL55-225ENST00000465268 C11orf86A6NJI1 115 aa8.79□□□□□ -1
MRPL55-225ENST00000465268 TRGC2P03986 189 aa8.79□□□□□ -1
MRPL55-225ENST00000465268 RPL13AP40429 203 aaKnown RBP8.79□□□□□ -1
MRPL55-225ENST00000465268 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
MRPL55-225ENST00000465268 SLC7A5P1Q8MH63 180 aa8.79□□□□□ -1
MRPL55-225ENST00000465268 ZNF625Q96I27 306 aaPredicted RBP8.79□□□□□ -1
MRPL55-225ENST00000465268 HSPB8Q9UJY1 196 aa8.79□□□□□ -1
MRPL55-225ENST00000465268 IGKV2-28A0A075B6P5 120 aa8.78□□□□□ -1
MRPL55-225ENST00000465268 IGKV2D-28P01615 120 aa8.78□□□□□ -1
MRPL55-225ENST00000465268 VPREB1P12018 145 aa8.78□□□□□ -1
MRPL55-225ENST00000465268 MUC2Q02817 5179 aa8.77□□□□□ -1.01
MRPL55-225ENST00000465268 LEPROTL1O95214 131 aa8.77□□□□□ -1.01
MRPL55-225ENST00000465268 TSPAN13O95857 204 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 661.1 ms