RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TRBV30A0A0K0K1B3 111 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 H3BNG1 76 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 TRIAP1O43715 76 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 MEIG1Q5JSS6 88 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 COX7B2Q8TF08 81 aa9.98□□□□□ -0.81
COL5A1-205ENST00000464187 LINC00959A0A1B0GUT2 108 aa9.96□□□□□ -0.81
COL5A1-205ENST00000464187 A0A1B0GUV1 79 aa9.96□□□□□ -0.81
COL5A1-205ENST00000464187 A0A087WZ39 114 aa9.96□□□□□ -0.82
COL5A1-205ENST00000464187 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
COL5A1-205ENST00000464187 TMEM262E9PQX1 116 aa9.96□□□□□ -0.82
COL5A1-205ENST00000464187 RPL13AP40429 203 aaKnown RBP9.96□□□□□ -0.82
COL5A1-205ENST00000464187 STAB2Q8WWQ8 2551 aa9.95□□□□□ -0.82
COL5A1-205ENST00000464187 TOMM7Q9P0U1 55 aa9.95□□□□□ -0.82
COL5A1-205ENST00000464187 C5orf38Q86SI9 138 aa9.94□□□□□ -0.82
COL5A1-205ENST00000464187 COPS9Q8WXC6 57 aa9.93□□□□□ -0.82
COL5A1-205ENST00000464187 ATXN8Q156A1 80 aa9.93□□□□□ -0.82
COL5A1-205ENST00000464187 CLPSL2Q6UWE3 100 aa9.93□□□□□ -0.82
COL5A1-205ENST00000464187 C9JAW5 83 aa9.92□□□□□ -0.82
COL5A1-205ENST00000464187 J3QR89 54 aa9.92□□□□□ -0.82
COL5A1-205ENST00000464187 PPDPFQ9H3Y8 114 aa9.92□□□□□ -0.82
COL5A1-205ENST00000464187 SS18Q15532 418 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 SLC25A20O43772 301 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 XCL1P47992 114 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 FOXI1Q12951 378 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 LINC01620Q4KN68 170 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 TEN1Q86WV5 123 aa9.91□□□□□ -0.82
COL5A1-205ENST00000464187 PCP4P48539 62 aa9.9□□□□□ -0.82
COL5A1-205ENST00000464187 LELP1Q5T871 98 aa9.9□□□□□ -0.82
COL5A1-205ENST00000464187 Q8N3U1 123 aa9.9□□□□□ -0.82
COL5A1-205ENST00000464187 M0QXV9 152 aa9.89□□□□□ -0.83
COL5A1-205ENST00000464187 MIR7-3HGQ8N6C7 128 aa9.89□□□□□ -0.83
COL5A1-205ENST00000464187 ANKRD29Q8N6D5 301 aa9.89□□□□□ -0.83
COL5A1-205ENST00000464187 CARD19Q96LW7 228 aa9.89□□□□□ -0.83
COL5A1-205ENST00000464187 COX6CP09669 75 aa9.89□□□□□ -0.83
COL5A1-205ENST00000464187 LINC00269Q8N2A0 174 aa9.88□□□□□ -0.83
COL5A1-205ENST00000464187 C15orf53Q8NAA6 179 aa9.88□□□□□ -0.83
COL5A1-205ENST00000464187 PPDPFLQ8WWR9 84 aa9.88□□□□□ -0.83
COL5A1-205ENST00000464187 CLEC2BQ92478 149 aa9.88□□□□□ -0.83
COL5A1-205ENST00000464187 IBA57-AS1B1ANH7 110 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 ESRGQ1W209 222 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 LINC01561Q8N1V8 128 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 FBN3Q75N90 2809 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 LST1O00453 97 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 LINC00158P58513 81 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 C21orf62-AS1Q17RA5 79 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 LINC01600Q96MT4 127 aa9.86□□□□□ -0.83
COL5A1-205ENST00000464187 TRBV10-2A0A0K0K1G8 114 aa9.85□□□□□ -0.83
COL5A1-205ENST00000464187 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
COL5A1-205ENST00000464187 Q8IZM0 81 aa9.85□□□□□ -0.83
COL5A1-205ENST00000464187 GAGE12HA6NDE8 117 aa9.84□□□□□ -0.83
COL5A1-205ENST00000464187 REG3AQ06141 175 aa9.84□□□□□ -0.83
COL5A1-205ENST00000464187 C6orf226Q5I0X4 101 aa9.84□□□□□ -0.83
COL5A1-205ENST00000464187 CD164L2Q6UWJ8 174 aa9.84□□□□□ -0.83
COL5A1-205ENST00000464187 CHCHD10Q8WYQ3 142 aaPredicted RBP9.84□□□□□ -0.83
COL5A1-205ENST00000464187 PFN2P35080 140 aa9.83□□□□□ -0.84
COL5A1-205ENST00000464187 CCL18P55774 89 aa9.83□□□□□ -0.84
COL5A1-205ENST00000464187 SND1-IT1Q9HBX3 110 aa9.83□□□□□ -0.84
COL5A1-205ENST00000464187 IGLV10-54A0A075B6I4 117 aa9.82□□□□□ -0.84
COL5A1-205ENST00000464187 IGKV2-28A0A075B6P5 120 aa9.82□□□□□ -0.84
COL5A1-205ENST00000464187 IGKV2D-28P01615 120 aa9.82□□□□□ -0.84
COL5A1-205ENST00000464187 WFDC10BQ8IUB3 73 aa9.82□□□□□ -0.84
COL5A1-205ENST00000464187 COX7A2LO14548 114 aa9.82□□□□□ -0.84
COL5A1-205ENST00000464187 LINC00337Q8N6G1 96 aa9.82□□□□□ -0.84
COL5A1-205ENST00000464187 TRAV13-2A0A0B4J235 113 aa9.81□□□□□ -0.84
COL5A1-205ENST00000464187 CRPP02741 224 aa9.81□□□□□ -0.84
COL5A1-205ENST00000464187 C2orf82Q6UX34 121 aa9.81□□□□□ -0.84
COL5A1-205ENST00000464187 NTN5Q8WTR8 489 aaPredicted RBP9.81□□□□□ -0.84
COL5A1-205ENST00000464187 H3BT86 120 aa9.8□□□□□ -0.84
COL5A1-205ENST00000464187 KIAA0087Q14695 138 aa9.8□□□□□ -0.84
COL5A1-205ENST00000464187 CSMD3Q7Z407 3707 aa9.79□□□□□ -0.84
COL5A1-205ENST00000464187 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
COL5A1-205ENST00000464187 LINC00588Q9Y4M8 146 aa9.79□□□□□ -0.84
COL5A1-205ENST00000464187 NUPR2A6NF83 97 aa9.78□□□□□ -0.84
COL5A1-205ENST00000464187 SIGMAR1Q99720 223 aa9.78□□□□□ -0.84
COL5A1-205ENST00000464187 MALP21145 153 aa9.77□□□□□ -0.84
COL5A1-205ENST00000464187 CKS1BP61024 79 aa9.77□□□□□ -0.84
COL5A1-205ENST00000464187 RPL28P46779 137 aaKnown RBP9.77□□□□□ -0.85
COL5A1-205ENST00000464187 CFAP161Q6P656 301 aa9.77□□□□□ -0.85
COL5A1-205ENST00000464187 UBE2WQ96B02 151 aa9.77□□□□□ -0.85
COL5A1-205ENST00000464187 PRR34Q9NV39 138 aa9.77□□□□□ -0.85
COL5A1-205ENST00000464187 KLK12Q9UKR0 248 aa9.77□□□□□ -0.85
COL5A1-205ENST00000464187 APLNQ9ULZ1 77 aa9.77□□□□□ -0.85
COL5A1-205ENST00000464187 TEX49A0A1B0GTD5 131 aa9.76□□□□□ -0.85
COL5A1-205ENST00000464187 CXCL5P42830 114 aa9.76□□□□□ -0.85
COL5A1-205ENST00000464187 KLK5Q9Y337 293 aaPredicted RBP9.76□□□□□ -0.85
COL5A1-205ENST00000464187 DYNC2H1Q8NCM8 4307 aaKnown RBP9.76□□□□□ -0.85
COL5A1-205ENST00000464187 DNAH7Q8WXX0 4024 aa9.76□□□□□ -0.85
COL5A1-205ENST00000464187 LINC01556Q5JQF7 62 aa9.75□□□□□ -0.85
COL5A1-205ENST00000464187 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
COL5A1-205ENST00000464187 ENHOQ6UWT2 76 aa9.75□□□□□ -0.85
COL5A1-205ENST00000464187 LYSTQ99698 3801 aa9.74□□□□□ -0.85
COL5A1-205ENST00000464187 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
COL5A1-205ENST00000464187 TRACP01848 142 aa9.73□□□□□ -0.85
COL5A1-205ENST00000464187 DNAH10OSP0CZ25 163 aa9.73□□□□□ -0.85
COL5A1-205ENST00000464187 UPK3BQ9BT76 320 aa9.73□□□□□ -0.85
COL5A1-205ENST00000464187 COX17Q14061 63 aa9.72□□□□□ -0.85
COL5A1-205ENST00000464187 PLECQ15149 4684 aaKnown RBP9.72□□□□□ -0.85
COL5A1-205ENST00000464187 SPAG11BQ08648 103 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms