RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 IFITM2Q01629 132 aa12.47□□□□□ -0.41
PDLIM4-205ENST00000463615 KIAA1644Q3SXP7 199 aa12.47□□□□□ -0.41
PDLIM4-205ENST00000463615 C6orf226Q5I0X4 101 aa12.47□□□□□ -0.41
PDLIM4-205ENST00000463615 SEC11CQ9BY50 192 aa12.47□□□□□ -0.41
PDLIM4-205ENST00000463615 GNB1LQ9BYB4 327 aa12.47□□□□□ -0.41
PDLIM4-205ENST00000463615 CDKN2A-AS1Q9UH64 79 aa12.47□□□□□ -0.41
PDLIM4-205ENST00000463615 H0Y9J4 135 aa12.46□□□□□ -0.41
PDLIM4-205ENST00000463615 ALKBH7Q9BT30 221 aaPredicted RBP12.45□□□□□ -0.42
PDLIM4-205ENST00000463615 TOMM7Q9P0U1 55 aa12.45□□□□□ -0.42
PDLIM4-205ENST00000463615 GEMIN7Q9H840 131 aaKnown RBP12.44□□□□□ -0.42
PDLIM4-205ENST00000463615 IGLV5-45A0A087WSX0 123 aa12.43□□□□□ -0.42
PDLIM4-205ENST00000463615 F8VRH5 84 aa12.43□□□□□ -0.42
PDLIM4-205ENST00000463615 CXCL5P42830 114 aa12.43□□□□□ -0.42
PDLIM4-205ENST00000463615 COX19Q49B96 90 aa12.43□□□□□ -0.42
PDLIM4-205ENST00000463615 SCGB3A1Q96QR1 104 aa12.43□□□□□ -0.42
PDLIM4-205ENST00000463615 TINCRA0A1B0GVN0 87 aa12.42□□□□□ -0.42
PDLIM4-205ENST00000463615 S100PP25815 95 aa12.42□□□□□ -0.42
PDLIM4-205ENST00000463615 UBE2BP63146 152 aa12.42□□□□□ -0.42
PDLIM4-205ENST00000463615 SMIM1B2RUZ4 78 aa12.4□□□□□ -0.42
PDLIM4-205ENST00000463615 KRTAP1-4P0C5Y4 121 aa12.4□□□□□ -0.42
PDLIM4-205ENST00000463615 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
PDLIM4-205ENST00000463615 C10orf91Q5T1B1 145 aa12.4□□□□□ -0.42
PDLIM4-205ENST00000463615 IGLV1-50A0A075B6I6 118 aa12.39□□□□□ -0.43
PDLIM4-205ENST00000463615 PRR26Q8N8Z3 221 aa12.39□□□□□ -0.43
PDLIM4-205ENST00000463615 TP73-AS1Q9UF72 201 aa12.39□□□□□ -0.43
PDLIM4-205ENST00000463615 LINC00469Q8N7U9 141 aa12.38□□□□□ -0.43
PDLIM4-205ENST00000463615 CST9LQ9H4G1 147 aa12.38□□□□□ -0.43
PDLIM4-205ENST00000463615 C22orf24Q9Y442 160 aa12.38□□□□□ -0.43
PDLIM4-205ENST00000463615 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
PDLIM4-205ENST00000463615 XAGE1AQ9HD64 81 aa12.37□□□□□ -0.43
PDLIM4-205ENST00000463615 NUPR1O60356 82 aa12.36□□□□□ -0.43
PDLIM4-205ENST00000463615 PMVKQ15126 192 aa12.35□□□□□ -0.43
PDLIM4-205ENST00000463615 RHEBQ15382 184 aa12.35□□□□□ -0.43
PDLIM4-205ENST00000463615 COX7B2Q8TF08 81 aa12.35□□□□□ -0.43
PDLIM4-205ENST00000463615 CARHSP1Q9Y2V2 147 aaKnown RBP12.35□□□□□ -0.43
PDLIM4-205ENST00000463615 ZNF861PO60384 105 aa12.34□□□□□ -0.43
PDLIM4-205ENST00000463615 COMMD7Q86VX2 200 aa12.34□□□□□ -0.43
PDLIM4-205ENST00000463615 MRPL18Q9H0U6 180 aaKnown RBP12.34□□□□□ -0.43
PDLIM4-205ENST00000463615 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
PDLIM4-205ENST00000463615 FABP9Q0Z7S8 132 aa12.32□□□□□ -0.44
PDLIM4-205ENST00000463615 MRPL55Q7Z7F7 128 aaKnown RBP12.31□□□□□ -0.44
PDLIM4-205ENST00000463615 SMCO4Q9NRQ5 59 aa12.31□□□□□ -0.44
PDLIM4-205ENST00000463615 RPL13AP40429 203 aaKnown RBP12.3□□□□□ -0.44
PDLIM4-205ENST00000463615 RNF213Q63HN8 5207 aa12.29□□□□□ -0.44
PDLIM4-205ENST00000463615 RPS10P5Q9NQ39 176 aa12.29□□□□□ -0.44
PDLIM4-205ENST00000463615 IGLV5-37A0A075B6J1 123 aa12.28□□□□□ -0.44
PDLIM4-205ENST00000463615 A0A096LNJ9 63 aa12.28□□□□□ -0.44
PDLIM4-205ENST00000463615 H3BRM9 83 aa12.28□□□□□ -0.44
PDLIM4-205ENST00000463615 SPINK8P0C7L1 97 aa12.28□□□□□ -0.44
PDLIM4-205ENST00000463615 IGLC3P0DOY3 106 aa12.28□□□□□ -0.44
PDLIM4-205ENST00000463615 IGLV5-39A0A0G2JS06 123 aa12.27□□□□□ -0.45
PDLIM4-205ENST00000463615 URB1-AS1Q96HZ7 61 aa12.27□□□□□ -0.45
PDLIM4-205ENST00000463615 BCE1O60756 84 aa12.26□□□□□ -0.45
PDLIM4-205ENST00000463615 C18orf32Q8TCD1 76 aa12.25□□□□□ -0.45
PDLIM4-205ENST00000463615 LINC00167Q96N53 147 aa12.25□□□□□ -0.45
PDLIM4-205ENST00000463615 LINC00614P0C842 121 aa12.24□□□□□ -0.45
PDLIM4-205ENST00000463615 RPL28P46779 137 aaKnown RBP12.24□□□□□ -0.45
PDLIM4-205ENST00000463615 TRAPPC1Q9Y5R8 145 aa12.23□□□□□ -0.45
PDLIM4-205ENST00000463615 LPAP08519 4548 aa12.22□□□□□ -0.45
PDLIM4-205ENST00000463615 ATP5LO75964 103 aa12.22□□□□□ -0.45
PDLIM4-205ENST00000463615 HBDP02042 147 aa12.22□□□□□ -0.45
PDLIM4-205ENST00000463615 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
PDLIM4-205ENST00000463615 RAB5BP61020 215 aa12.21□□□□□ -0.45
PDLIM4-205ENST00000463615 KRTAP13-1Q8IUC0 172 aa12.19□□□□□ -0.46
PDLIM4-205ENST00000463615 RPL37AP8A6NKH3 93 aa12.18□□□□□ -0.46
PDLIM4-205ENST00000463615 COX17Q14061 63 aa12.18□□□□□ -0.46
PDLIM4-205ENST00000463615 NKAPP1Q8N9T2 125 aa12.18□□□□□ -0.46
PDLIM4-205ENST00000463615 NDUFA6P56556 154 aa12.16□□□□□ -0.46
PDLIM4-205ENST00000463615 SFTA2Q6UW10 78 aa12.16□□□□□ -0.46
PDLIM4-205ENST00000463615 GAGE10A6NGK3 116 aa12.15□□□□□ -0.46
PDLIM4-205ENST00000463615 SNAPINO95295 136 aa12.15□□□□□ -0.46
PDLIM4-205ENST00000463615 APOC3P02656 99 aa12.15□□□□□ -0.46
PDLIM4-205ENST00000463615 ERG28Q9UKR5 140 aa12.15□□□□□ -0.46
PDLIM4-205ENST00000463615 C11orf86A6NJI1 115 aa12.14□□□□□ -0.47
PDLIM4-205ENST00000463615 PFN2P35080 140 aa12.14□□□□□ -0.47
PDLIM4-205ENST00000463615 BAGE3Q86Y29 109 aa12.14□□□□□ -0.47
PDLIM4-205ENST00000463615 SVBPQ8N300 66 aa12.14□□□□□ -0.47
PDLIM4-205ENST00000463615 SND1-IT1Q9HBX3 110 aa12.14□□□□□ -0.47
PDLIM4-205ENST00000463615 A0A087X002 238 aa12.13□□□□□ -0.47
PDLIM4-205ENST00000463615 CRYGAP11844 174 aa12.13□□□□□ -0.47
PDLIM4-205ENST00000463615 VPREB1P12018 145 aa12.13□□□□□ -0.47
PDLIM4-205ENST00000463615 PMCHL1Q16048 86 aa12.13□□□□□ -0.47
PDLIM4-205ENST00000463615 NDUFA5Q16718 116 aa12.12□□□□□ -0.47
PDLIM4-205ENST00000463615 ZNF625Q96I27 306 aaPredicted RBP12.12□□□□□ -0.47
PDLIM4-205ENST00000463615 YPEL4Q96NS1 127 aa12.12□□□□□ -0.47
PDLIM4-205ENST00000463615 RPL24P83731 157 aaKnown RBP12.1□□□□□ -0.47
PDLIM4-205ENST00000463615 UBE2AP49459 152 aa12.09□□□□□ -0.47
PDLIM4-205ENST00000463615 FAM229BQ4G0N7 80 aa12.09□□□□□ -0.47
PDLIM4-205ENST00000463615 TMEM170BQ5T4T1 132 aa12.09□□□□□ -0.47
PDLIM4-205ENST00000463615 CHCHD1Q96BP2 118 aaKnown RBP12.09□□□□□ -0.47
PDLIM4-205ENST00000463615 IGKV2-28A0A075B6P5 120 aa12.08□□□□□ -0.48
PDLIM4-205ENST00000463615 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.48
PDLIM4-205ENST00000463615 SCO1O75880 301 aa12.08□□□□□ -0.48
PDLIM4-205ENST00000463615 IGKV2D-28P01615 120 aa12.08□□□□□ -0.48
PDLIM4-205ENST00000463615 CHTOPQ9Y3Y2 248 aaKnown RBP12.08□□□□□ -0.48
PDLIM4-205ENST00000463615 TYMSOSQ8TAI1 123 aa12.07□□□□□ -0.48
PDLIM4-205ENST00000463615 PRR4Q16378 134 aa12.06□□□□□ -0.48
PDLIM4-205ENST00000463615 TMEM126AQ9H061 195 aa12.06□□□□□ -0.48
PDLIM4-205ENST00000463615 TMEM223A0PJW6 202 aa12.05□□□□□ -0.48
PDLIM4-205ENST00000463615 KRTAP13-2Q52LG2 175 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms