RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 TRBV20-1A0A075B6N2 111 aa6.92□□□□□ -1.3
MSH5-211ENST00000463144 H3BNG1 76 aa6.92□□□□□ -1.3
MSH5-211ENST00000463144 Q1RN00 199 aa6.92□□□□□ -1.3
MSH5-211ENST00000463144 LINC01561Q8N1V8 128 aa6.92□□□□□ -1.3
MSH5-211ENST00000463144 NANOS2P60321 138 aaKnown RBP6.92□□□□□ -1.3
MSH5-211ENST00000463144 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
MSH5-211ENST00000463144 MIR7-3HGQ8N6C7 128 aa6.92□□□□□ -1.3
MSH5-211ENST00000463144 RPL13AP40429 203 aaKnown RBP6.91□□□□□ -1.3
MSH5-211ENST00000463144 FOXI1Q12951 378 aa6.91□□□□□ -1.3
MSH5-211ENST00000463144 KIAA0087Q14695 138 aa6.91□□□□□ -1.3
MSH5-211ENST00000463144 ETDBQ3ZM63 59 aa6.91□□□□□ -1.3
MSH5-211ENST00000463144 PPDPFQ9H3Y8 114 aa6.91□□□□□ -1.3
MSH5-211ENST00000463144 NOTCH1P46531 2555 aa6.91□□□□□ -1.3
MSH5-211ENST00000463144 IBA57-AS1B1ANH7 110 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 K7ERU9 68 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 ENHOQ6UWT2 76 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 C2orf82Q6UX34 121 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 Q8IZM0 81 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 PRR34Q9NV39 138 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 KLK12Q9UKR0 248 aa6.9□□□□□ -1.3
MSH5-211ENST00000463144 COX7A2LO14548 114 aa6.9□□□□□ -1.31
MSH5-211ENST00000463144 LINC00158P58513 81 aa6.9□□□□□ -1.31
MSH5-211ENST00000463144 RNF151Q2KHN1 245 aa6.9□□□□□ -1.31
MSH5-211ENST00000463144 CBY1Q9Y3M2 126 aa6.9□□□□□ -1.31
MSH5-211ENST00000463144 K7EIL1 84 aa6.89□□□□□ -1.31
MSH5-211ENST00000463144 PFN2P35080 140 aa6.89□□□□□ -1.31
MSH5-211ENST00000463144 COPS9Q8WXC6 57 aa6.89□□□□□ -1.31
MSH5-211ENST00000463144 WFDC10BQ8IUB3 73 aa6.89□□□□□ -1.31
MSH5-211ENST00000463144 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
MSH5-211ENST00000463144 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 CCL18P55774 89 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 ESRGQ1W209 222 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 HUWE1Q7Z6Z7 4374 aaKnown RBP6.88□□□□□ -1.31
MSH5-211ENST00000463144 NBEAL1Q6ZS30 2694 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
MSH5-211ENST00000463144 TM2D3Q9BRN9 247 aa6.87□□□□□ -1.31
MSH5-211ENST00000463144 MALP21145 153 aa6.87□□□□□ -1.31
MSH5-211ENST00000463144 ATXN8Q156A1 80 aa6.87□□□□□ -1.31
MSH5-211ENST00000463144 CLEC2BQ92478 149 aa6.87□□□□□ -1.31
MSH5-211ENST00000463144 SND1-IT1Q9HBX3 110 aa6.87□□□□□ -1.31
MSH5-211ENST00000463144 C9JAW5 83 aa6.86□□□□□ -1.31
MSH5-211ENST00000463144 CFAP161Q6P656 301 aa6.86□□□□□ -1.31
MSH5-211ENST00000463144 LINC00337Q8N6G1 96 aa6.86□□□□□ -1.31
MSH5-211ENST00000463144 MRAPQ8TCY5 172 aa6.86□□□□□ -1.31
MSH5-211ENST00000463144 CKS1BP61024 79 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 DEFB121Q5J5C9 76 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 UBE2WQ96B02 151 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 SPATA25Q9BR10 227 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 KLK5Q9Y337 293 aaPredicted RBP6.85□□□□□ -1.31
MSH5-211ENST00000463144 SLC25A20O43772 301 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 COX6CP09669 75 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 C6orf223Q8N319 242 aa6.85□□□□□ -1.31
MSH5-211ENST00000463144 C9orf116Q5BN46 136 aaPredicted RBP6.84□□□□□ -1.31
MSH5-211ENST00000463144 C10orf25Q5T742 122 aa6.84□□□□□ -1.31
MSH5-211ENST00000463144 LINC00526Q96FQ7 95 aa6.84□□□□□ -1.31
MSH5-211ENST00000463144 LST1O00453 97 aa6.84□□□□□ -1.31
MSH5-211ENST00000463144 KRTAP26-1Q6PEX3 210 aa6.84□□□□□ -1.31
MSH5-211ENST00000463144 CARD19Q96LW7 228 aa6.84□□□□□ -1.31
MSH5-211ENST00000463144 VPS25Q9BRG1 176 aa6.84□□□□□ -1.31
MSH5-211ENST00000463144 CXCL5P42830 114 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 DNHD1Q96M86 4753 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 TRAV13-2A0A0B4J235 113 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 SPAG11BQ08648 103 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 TEN1Q86WV5 123 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 ANKRD29Q8N6D5 301 aa6.83□□□□□ -1.32
MSH5-211ENST00000463144 CRPP02741 224 aa6.82□□□□□ -1.32
MSH5-211ENST00000463144 LINC01600Q96MT4 127 aa6.82□□□□□ -1.32
MSH5-211ENST00000463144 TRBV10-2A0A0K0K1G8 114 aa6.81□□□□□ -1.32
MSH5-211ENST00000463144 M0QXV9 152 aa6.81□□□□□ -1.32
MSH5-211ENST00000463144 COX17Q14061 63 aa6.81□□□□□ -1.32
MSH5-211ENST00000463144 TRAV10A0A0B4J240 114 aa6.81□□□□□ -1.32
MSH5-211ENST00000463144 RPL28P46779 137 aaKnown RBP6.81□□□□□ -1.32
MSH5-211ENST00000463144 PRR3P79522 188 aaKnown RBP6.8□□□□□ -1.32
MSH5-211ENST00000463144 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
MSH5-211ENST00000463144 LINC01556Q5JQF7 62 aa6.8□□□□□ -1.32
MSH5-211ENST00000463144 Q8NDZ9 215 aa6.8□□□□□ -1.32
MSH5-211ENST00000463144 FAM218AQ96MZ4 157 aa6.8□□□□□ -1.32
MSH5-211ENST00000463144 NTN5Q8WTR8 489 aaPredicted RBP6.79□□□□□ -1.32
MSH5-211ENST00000463144 PPDPFLQ8WWR9 84 aa6.79□□□□□ -1.32
MSH5-211ENST00000463144 MGAM2Q2M2H8 2515 aa6.79□□□□□ -1.32
MSH5-211ENST00000463144 J3QR89 54 aa6.79□□□□□ -1.32
MSH5-211ENST00000463144 DNAH9Q9NYC9 4486 aa6.78□□□□□ -1.32
MSH5-211ENST00000463144 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
MSH5-211ENST00000463144 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
MSH5-211ENST00000463144 COL7A1Q02388 2944 aa6.77□□□□□ -1.32
MSH5-211ENST00000463144 H3BT86 120 aa6.77□□□□□ -1.33
MSH5-211ENST00000463144 DNAH10OSP0CZ25 163 aa6.77□□□□□ -1.33
MSH5-211ENST00000463144 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
MSH5-211ENST00000463144 C15orf53Q8NAA6 179 aa6.77□□□□□ -1.33
MSH5-211ENST00000463144 OR13C6PQ8NH95 151 aa6.77□□□□□ -1.33
MSH5-211ENST00000463144 GVQW2A0A096LPI5 108 aaPredicted RBP6.76□□□□□ -1.33
MSH5-211ENST00000463144 NDUFC2O95298 119 aa6.76□□□□□ -1.33
MSH5-211ENST00000463144 HIGD2BQ4VC39 106 aa6.76□□□□□ -1.33
MSH5-211ENST00000463144 DNAH1Q9P2D7 4330 aa6.76□□□□□ -1.33
MSH5-211ENST00000463144 TEX49A0A1B0GTD5 131 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms