RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZC2HC1BQ5TFG8 222 aa9.22□□□□□ -0.93
SKA3-204ENST00000462482 ANAPC16Q96DE5 110 aa9.22□□□□□ -0.93
SKA3-204ENST00000462482 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
SKA3-204ENST00000462482 NXT2Q9NPJ8 142 aaKnown RBP9.22□□□□□ -0.93
SKA3-204ENST00000462482 F8VRH5 84 aa9.21□□□□□ -0.94
SKA3-204ENST00000462482 LINC00173Q6ZV60 143 aa9.21□□□□□ -0.94
SKA3-204ENST00000462482 CXCL5P42830 114 aa9.2□□□□□ -0.94
SKA3-204ENST00000462482 RPL28P46779 137 aaKnown RBP9.2□□□□□ -0.94
SKA3-204ENST00000462482 CTDSP1Q9GZU7 261 aa9.2□□□□□ -0.94
SKA3-204ENST00000462482 IGIPA6NJ69 53 aa9.19□□□□□ -0.94
SKA3-204ENST00000462482 FAM19A3Q7Z5A8 133 aa9.19□□□□□ -0.94
SKA3-204ENST00000462482 TP73-AS1Q9UF72 201 aa9.19□□□□□ -0.94
SKA3-204ENST00000462482 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
SKA3-204ENST00000462482 MRPL55Q7Z7F7 128 aaKnown RBP9.18□□□□□ -0.94
SKA3-204ENST00000462482 TIMM17AQ99595 171 aa9.18□□□□□ -0.94
SKA3-204ENST00000462482 A0A0U1RQV1 116 aa9.17□□□□□ -0.94
SKA3-204ENST00000462482 A0A1B0GVG6 124 aa9.17□□□□□ -0.94
SKA3-204ENST00000462482 BCE1O60756 84 aa9.16□□□□□ -0.94
SKA3-204ENST00000462482 TSPAN13O95857 204 aa9.16□□□□□ -0.94
SKA3-204ENST00000462482 RAB14P61106 215 aa9.16□□□□□ -0.94
SKA3-204ENST00000462482 LPAP08519 4548 aa9.15□□□□□ -0.94
SKA3-204ENST00000462482 CRYGAP11844 174 aa9.15□□□□□ -0.94
SKA3-204ENST00000462482 TOMM6Q96B49 74 aa9.15□□□□□ -0.94
SKA3-204ENST00000462482 SCGB3A1Q96QR1 104 aa9.15□□□□□ -0.94
SKA3-204ENST00000462482 LINC01549A6NIU2 74 aa9.14□□□□□ -0.95
SKA3-204ENST00000462482 ERASQ7Z444 233 aa9.14□□□□□ -0.95
SKA3-204ENST00000462482 TYMSOSQ8TAI1 123 aa9.14□□□□□ -0.95
SKA3-204ENST00000462482 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
SKA3-204ENST00000462482 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
SKA3-204ENST00000462482 TINCRA0A1B0GVN0 87 aa9.12□□□□□ -0.95
SKA3-204ENST00000462482 NKAPP1Q8N9T2 125 aa9.12□□□□□ -0.95
SKA3-204ENST00000462482 RPL37AP8A6NKH3 93 aa9.11□□□□□ -0.95
SKA3-204ENST00000462482 SMIM1B2RUZ4 78 aa9.11□□□□□ -0.95
SKA3-204ENST00000462482 UBE2AP49459 152 aa9.11□□□□□ -0.95
SKA3-204ENST00000462482 LINC00167Q96N53 147 aa9.11□□□□□ -0.95
SKA3-204ENST00000462482 GAGE10A6NGK3 116 aa9.1□□□□□ -0.95
SKA3-204ENST00000462482 A0A087X002 238 aa9.09□□□□□ -0.95
SKA3-204ENST00000462482 RAB5BP61020 215 aa9.09□□□□□ -0.95
SKA3-204ENST00000462482 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
SKA3-204ENST00000462482 H3BRM9 83 aa9.08□□□□□ -0.96
SKA3-204ENST00000462482 ATP5LO75964 103 aa9.08□□□□□ -0.96
SKA3-204ENST00000462482 MRPL18Q9H0U6 180 aaKnown RBP9.08□□□□□ -0.96
SKA3-204ENST00000462482 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
SKA3-204ENST00000462482 SPINK8P0C7L1 97 aa9.07□□□□□ -0.96
SKA3-204ENST00000462482 CST9LQ9H4G1 147 aa9.07□□□□□ -0.96
SKA3-204ENST00000462482 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
SKA3-204ENST00000462482 IGLV5-45A0A087WSX0 123 aa9.06□□□□□ -0.96
SKA3-204ENST00000462482 ADCYAP1P18509 176 aa9.06□□□□□ -0.96
SKA3-204ENST00000462482 S100PP25815 95 aa9.06□□□□□ -0.96
SKA3-204ENST00000462482 PMVKQ15126 192 aa9.06□□□□□ -0.96
SKA3-204ENST00000462482 SMCO4Q9NRQ5 59 aa9.06□□□□□ -0.96
SKA3-204ENST00000462482 FA2HQ7L5A8 372 aa9.05□□□□□ -0.96
SKA3-204ENST00000462482 IGKV2D-26A0A0A0MRZ7 120 aa9.04□□□□□ -0.96
SKA3-204ENST00000462482 FAM229BQ4G0N7 80 aa9.04□□□□□ -0.96
SKA3-204ENST00000462482 ANAPC11Q9NYG5 84 aa9.04□□□□□ -0.96
SKA3-204ENST00000462482 IGKV2-28A0A075B6P5 120 aa9.03□□□□□ -0.96
SKA3-204ENST00000462482 IGKV2D-28P01615 120 aa9.03□□□□□ -0.96
SKA3-204ENST00000462482 GNB1LQ9BYB4 327 aa9.03□□□□□ -0.96
SKA3-204ENST00000462482 PFN2P35080 140 aa9.02□□□□□ -0.97
SKA3-204ENST00000462482 COX19Q49B96 90 aa9.02□□□□□ -0.97
SKA3-204ENST00000462482 LINC00304Q8N9R0 145 aa9.02□□□□□ -0.97
SKA3-204ENST00000462482 NDUFA6P56556 154 aa9.01□□□□□ -0.97
SKA3-204ENST00000462482 RPL24P83731 157 aaKnown RBP9.01□□□□□ -0.97
SKA3-204ENST00000462482 LINC01546A6NGU7 62 aa9□□□□□ -0.97
SKA3-204ENST00000462482 FAM19A1Q7Z5A9 133 aa9□□□□□ -0.97
SKA3-204ENST00000462482 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
SKA3-204ENST00000462482 MUC2Q02817 5179 aa9□□□□□ -0.97
SKA3-204ENST00000462482 FABP9Q0Z7S8 132 aa8.99□□□□□ -0.97
SKA3-204ENST00000462482 KRTAP13-2Q52LG2 175 aa8.99□□□□□ -0.97
SKA3-204ENST00000462482 CLLU1Q5K131 121 aa8.99□□□□□ -0.97
SKA3-204ENST00000462482 UQCC3Q6UW78 93 aa8.99□□□□□ -0.97
SKA3-204ENST00000462482 PRLHP81277 87 aa8.98□□□□□ -0.97
SKA3-204ENST00000462482 RETNLBQ9BQ08 111 aa8.98□□□□□ -0.97
SKA3-204ENST00000462482 CDIP1Q9H305 208 aa8.98□□□□□ -0.97
SKA3-204ENST00000462482 ERG28Q9UKR5 140 aa8.98□□□□□ -0.97
SKA3-204ENST00000462482 TMEM218A2RU14 115 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 SCO1O75880 301 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 IGLC3P0DOY3 106 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 CTAG1AP78358 180 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 COX17Q14061 63 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 SFTA2Q6UW10 78 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
SKA3-204ENST00000462482 IGLV5-39A0A0G2JS06 123 aa8.96□□□□□ -0.98
SKA3-204ENST00000462482 VPREB1P12018 145 aa8.95□□□□□ -0.98
SKA3-204ENST00000462482 CBLN2Q8IUK8 224 aa8.95□□□□□ -0.98
SKA3-204ENST00000462482 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
SKA3-204ENST00000462482 TMEM238C9JI98 176 aa8.94□□□□□ -0.98
SKA3-204ENST00000462482 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
SKA3-204ENST00000462482 ZNF625Q96I27 306 aaPredicted RBP8.94□□□□□ -0.98
SKA3-204ENST00000462482 SEC11CQ9BY50 192 aa8.93□□□□□ -0.98
SKA3-204ENST00000462482 TPRXLQ17RH7 258 aa8.92□□□□□ -0.98
SKA3-204ENST00000462482 TMEM170BQ5T4T1 132 aa8.92□□□□□ -0.98
SKA3-204ENST00000462482 HIGD2AQ9BW72 106 aa8.92□□□□□ -0.98
SKA3-204ENST00000462482 M0R378 163 aa8.91□□□□□ -0.98
SKA3-204ENST00000462482 HBDP02042 147 aa8.91□□□□□ -0.98
SKA3-204ENST00000462482 PLEKHB2Q96CS7 222 aa8.91□□□□□ -0.98
SKA3-204ENST00000462482 LINC00614P0C842 121 aa8.9□□□□□ -0.98
SKA3-204ENST00000462482 LINC00158P58513 81 aa8.9□□□□□ -0.98
SKA3-204ENST00000462482 C4orf48Q5BLP8 95 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 324.7 ms