RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 TRAV8-3A0A0A6YYJ7 113 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 TRAV4A0A0B4J268 109 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 A0A0B4J2C4 111 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 IGHV1-58A0A0C4DH39 117 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 TMEM238C9JI98 176 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 APOMO95445 188 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 IGLV1-51P01701 117 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 IGHV3-33P01772 117 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 COTL1Q14019 142 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 RNASE13Q5GAN3 156 aaKnown RBP2.63□□□□□ -1.99
CFHR3-204ENST00000461558 NTM-AS1Q6ZSK4 140 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 Q6ZTI0 123 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 MUSTN1Q8IVN3 82 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 ATP6V0E2Q8NHE4 81 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 VSIG2Q96IQ7 327 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 DHRS4-AS1Q9P1J3 65 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 PRO1854Q9UHT4 67 aa2.63□□□□□ -1.99
CFHR3-204ENST00000461558 ABCA12Q86UK0 2595 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 CUBNO60494 3623 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 PTPN13Q12923 2485 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 TRBV20-1A0A075B6N2 111 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 IGHV3OR16-12A0A075B7B8 117 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 TRGV1A0A0A0MS02 117 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 TRBV10-1A0A0K0K1A3 114 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 TIMM17BO60830 172 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 TCL1BO95988 128 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 SPINK8P0C7L1 97 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 LINC00694P0DN24 101 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 PSMB2P49721 201 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 CMC4P56277 68 aaPredicted RBP2.62□□□□□ -1.99
CFHR3-204ENST00000461558 KRTAP10-10P60014 251 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 COX6A2Q02221 97 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 DAZ2Q13117 558 aaKnown RBP2.62□□□□□ -1.99
CFHR3-204ENST00000461558 MIAQ16674 131 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 ETDBQ3ZM63 59 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 ZFAND6Q6FIF0 208 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 LINC01561Q8N1V8 128 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 MTURNQ8N3F0 131 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 TMEM101Q96IK0 257 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 LINC01600Q96MT4 127 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 WFDC10AQ9H1F0 79 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 CDKN2A-AS1Q9UH64 79 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 CSDC2Q9Y534 153 aaKnown RBP2.62□□□□□ -1.99
CFHR3-204ENST00000461558 ANK3Q12955 4377 aaKnown RBP2.62□□□□□ -1.99
CFHR3-204ENST00000461558 FAM208BQ5VWN6 2430 aa2.62□□□□□ -1.99
CFHR3-204ENST00000461558 FLNAP21333 2647 aaKnown RBP2.62□□□□□ -1.99
CFHR3-204ENST00000461558 LOC107984156A0A0G2JMH3 177 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 F5H768 121 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 M0QXV9 152 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 NDUFA1O15239 70 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 INSL3P51460 131 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 LYRM7Q5U5X0 104 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 SFTA2Q6UW10 78 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 DAZ4Q86SG3 579 aaKnown RBP2.61□□□□□ -1.99
CFHR3-204ENST00000461558 ARL17AQ8IVW1 177 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 C16orf74Q96GX8 76 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 CARD19Q96LW7 228 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 GTSF1LQ9H1H1 148 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 NOP10Q9NPE3 64 aaKnown RBP2.61□□□□□ -1.99
CFHR3-204ENST00000461558 DAZ3Q9NR90 486 aaKnown RBP2.61□□□□□ -1.99
CFHR3-204ENST00000461558 CDC42SE2Q9NRR3 84 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 NDUFA12Q9UI09 145 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 NF1P21359 2839 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 NAV2Q8IVL1 2488 aa2.61□□□□□ -1.99
CFHR3-204ENST00000461558 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.6□□□□□ -1.99
CFHR3-204ENST00000461558 TRBV30A0A0K0K1B3 111 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 LOC100131303A0A0U1RQF7 123 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 TRBV6-4A0A1B0GX49 114 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 J3QKU1 62 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 IFITM1P13164 125 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 HERVK_113P63121 156 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 TEN1Q86WV5 123 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 ZNF625Q96I27 306 aaPredicted RBP2.6□□□□□ -1.99
CFHR3-204ENST00000461558 GEMIN7Q9H840 131 aaKnown RBP2.6□□□□□ -1.99
CFHR3-204ENST00000461558 ERG28Q9UKR5 140 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 EPG5Q9HCE0 2579 aa2.6□□□□□ -1.99
CFHR3-204ENST00000461558 CREBBPQ92793 2442 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 J3QR89 54 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 SCGB1A1P11684 91 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 SOSTDC1Q6X4U4 206 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 ANKRD29Q8N6D5 301 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 KIR2DL5BQ8NHK3 375 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 LINC00308Q8TCZ7 52 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 ZNF418Q8TF45 676 aaPredicted RBP2.59□□□□□ -1.99
CFHR3-204ENST00000461558 PPDPFLQ8WWR9 84 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 SMR3AQ99954 134 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 TMEM243Q9BU79 118 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 PPDPFQ9H3Y8 114 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 ICOSQ9Y6W8 199 aa2.59□□□□□ -1.99
CFHR3-204ENST00000461558 WNK1Q9H4A3 2382 aa2.59□□□□□ -2
CFHR3-204ENST00000461558 NIPBLQ6KC79 2804 aaeCLIP2.58□□□□□ -2
CFHR3-204ENST00000461558 MYO9AB2RTY4 2548 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 IGLV4-60A0A075B6I1 120 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 TRGV2A0A075B6R0 118 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 C9JAW5 83 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 SLC25A20O43772 301 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 SCGB1C2P0DMR2 95 aa2.58□□□□□ -2
CFHR3-204ENST00000461558 NPC2P61916 151 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms