RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 USMG5Q96IX5 58 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 CACFD1Q9UGQ2 172 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 TULP4Q9NRJ4 1543 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 SPTA1P02549 2419 aa0.06□□□□□ -2.4
VCL-203ENST00000461383 PIEZO2Q9H5I5 2752 aa0.05□□□□□ -2.4
VCL-203ENST00000461383 K7EQZ3 153 aa0.05□□□□□ -2.4
VCL-203ENST00000461383 COX8AP10176 69 aa0.05□□□□□ -2.4
VCL-203ENST00000461383 CHD6Q8TD26 2715 aa0.05□□□□□ -2.4
VCL-203ENST00000461383 NLRP1Q9C000 1473 aa0.04□□□□□ -2.4
VCL-203ENST00000461383 H3BQF6 201 aa0.04□□□□□ -2.4
VCL-203ENST00000461383 UQCRHP07919 91 aa0.04□□□□□ -2.4
VCL-203ENST00000461383 LINC00032P0C843 101 aa0.04□□□□□ -2.4
VCL-203ENST00000461383 COL4A6Q14031 1691 aa0.04□□□□□ -2.4
VCL-203ENST00000461383 KNDC1Q76NI1 1749 aa0.04□□□□□ -2.4
VCL-203ENST00000461383 MLH3Q9UHC1 1453 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 TRBV25-1A0A075B6N4 114 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 A0A1B0GU69 56 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 ATOX1O00244 68 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 SPINK4O60575 86 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 ASIPP42127 132 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 ACBD7Q8N6N7 88 aa0.03□□□□□ -2.4
VCL-203ENST00000461383 MYCBP2O75592 4640 aa0.03□□□□□ -2.41
VCL-203ENST00000461383 CNTLNQ9NXG0 1405 aa0.03□□□□□ -2.41
VCL-203ENST00000461383 FMN2Q9NZ56 1722 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 WNK1Q9H4A3 2382 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 MAP1BP46821 2468 aaKnown RBP0.02□□□□□ -2.41
VCL-203ENST00000461383 LOC730098B7Z3J9 87 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 MT-ATP8P03928 68 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 GNGT1P63211 74 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 PKD1L1Q8TDX9 2849 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 PLEKHH2Q8IVE3 1493 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 KIAA0556O60303 1618 aa0.02□□□□□ -2.41
VCL-203ENST00000461383 PAPPA2Q9BXP8 1791 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 MPC2O95563 127 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 COL5A1-AS1Q5SY13 56 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 C6orf201Q7Z4U5 140 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 DEFB107AQ8IZN7 70 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 TRGV9Q99603 122 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 DPY30Q9C005 99 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 CCDC141Q6ZP82 1450 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 FYCO1Q9BQS8 1478 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 HMCN2Q8NDA2 5059 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 MYH4Q9Y623 1939 aa0.01□□□□□ -2.41
VCL-203ENST00000461383 FLNCQ14315 2725 aa0□□□□□ -2.41
VCL-203ENST00000461383 H0Y9P7 68 aa0□□□□□ -2.41
VCL-203ENST00000461383 CACNA1AO00555 2505 aa0□□□□□ -2.41
VCL-203ENST00000461383 PRDM15P57071 1507 aaPredicted RBP0□□□□□ -2.41
VCL-203ENST00000461383 ANKRD36BQ8N2N9 1353 aa0□□□□□ -2.41
VCL-203ENST00000461383 SERP2Q8N6R1 65 aa0□□□□□ -2.41
VCL-203ENST00000461383 DEFB105AQ8NG35 78 aa0□□□□□ -2.41
VCL-203ENST00000461383 KIF20BQ96Q89 1820 aa0□□□□□ -2.41
VCL-203ENST00000461383 FAT2Q9NYQ8 4349 aa0□□□□□ -2.41
VCL-203ENST00000461383 FSIP2Q5CZC0 6907 aa-0□□□□□ -2.41
VCL-203ENST00000461383 TENM4Q6N022 2769 aa-0□□□□□ -2.41
VCL-203ENST00000461383 COL14A1Q05707 1796 aaKnown RBP-0.01□□□□□ -2.41
VCL-203ENST00000461383 MON2Q7Z3U7 1717 aa-0.01□□□□□ -2.41
VCL-203ENST00000461383 MARF1Q9Y4F3 1742 aaKnown RBP-0.01□□□□□ -2.41
VCL-203ENST00000461383 M0R143 59 aa-0.01□□□□□ -2.41
VCL-203ENST00000461383 FAUP35544 74 aaKnown RBP-0.01□□□□□ -2.41
VCL-203ENST00000461383 ANKRD17O75179 2603 aaKnown RBP-0.01□□□□□ -2.41
VCL-203ENST00000461383 SHPRHQ149N8 1683 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 RAPGEF2Q9Y4G8 1499 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 UQCRHLA0A096LP55 91 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 H7BZZ5 65 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 NCMAPQ5T1S8 102 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 CRIPTQ9P021 101 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 APC2O95996 2303 aa-0.02□□□□□ -2.41
VCL-203ENST00000461383 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 TEX14Q8IWB6 1497 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 BSNQ9UPA5 3926 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 AKAP12Q02952 1782 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 PRM1P04553 51 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 ARMS2P0C7Q2 107 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 APLNQ9ULZ1 77 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 CLTCQ00610 1675 aaKnown RBP-0.03□□□□□ -2.41
VCL-203ENST00000461383 TARBP1Q13395 1621 aaKnown RBP-0.03□□□□□ -2.41
VCL-203ENST00000461383 ABCC2Q92887 1545 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 LPAP08519 4548 aa-0.03□□□□□ -2.41
VCL-203ENST00000461383 SSPOA2VEC9 5147 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 C5P01031 1676 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 CHD8Q9HCK8 2581 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 ALMS1Q8TCU4 4167 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 CPSF4LA6NMK7 179 aaKnown RBP-0.04□□□□□ -2.42
VCL-203ENST00000461383 SPRR2DP22532 72 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 KLK9Q2XQG4 91 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 ZNF720Q7Z2F6 126 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 ATRQ13535 2644 aa-0.04□□□□□ -2.42
VCL-203ENST00000461383 I3L3M4 83 aa-0.05□□□□□ -2.42
VCL-203ENST00000461383 ETDBQ3ZM63 59 aa-0.05□□□□□ -2.42
VCL-203ENST00000461383 LRRC37AA6NMS7 1700 aa-0.05□□□□□ -2.42
VCL-203ENST00000461383 EDC4Q6P2E9 1401 aaKnown RBP-0.05□□□□□ -2.42
VCL-203ENST00000461383 HSPG2P98160 4391 aa-0.06□□□□□ -2.42
VCL-203ENST00000461383 HMGN3Q15651 99 aa-0.06□□□□□ -2.42
VCL-203ENST00000461383 DCHS2Q6V1P9 2916 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 NSD1Q96L73 2696 aaPredicted RBP-0.07□□□□□ -2.42
VCL-203ENST00000461383 D6R8Y8 96 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 LEPROTL1O95214 131 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 S100A8P05109 93 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 MUSTN1Q8IVN3 82 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 FLNAP21333 2647 aaKnown RBP-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms