RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 TRBV6-8A0A0A6YYG3 113 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 IGHV3OR16-9A0A0B4J2B5 98 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 A0A1B0GUV1 79 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 CRPP02741 224 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 LINC00612Q8N6U2 182 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 OBSCN-AS1Q96MR7 158 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 MDFIQ99750 246 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 NOP10Q9NPE3 64 aaKnown RBP4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 CUBNO60494 3623 aa4.31□□□□□ -1.72
UBQLN4-202ENST00000459954 TRGV2A0A075B6R0 118 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 TRGV4A0A0C4DH28 118 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 SMIM9A6NGZ8 99 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 MALP21145 153 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 FHL2Q14192 279 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 C5orf38Q86SI9 138 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 MUC7Q8TAX7 377 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 MRAPQ8TCY5 172 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 TMEM126AQ9H061 195 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 SND1-IT1Q9HBX3 110 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 C22orf24Q9Y442 160 aa4.3□□□□□ -1.72
UBQLN4-202ENST00000459954 IGKV2-28A0A075B6P5 120 aa4.29□□□□□ -1.72
UBQLN4-202ENST00000459954 DNAL4O96015 105 aa4.29□□□□□ -1.72
UBQLN4-202ENST00000459954 IGKV2D-28P01615 120 aa4.29□□□□□ -1.72
UBQLN4-202ENST00000459954 COX17Q14061 63 aa4.29□□□□□ -1.72
UBQLN4-202ENST00000459954 Q8IZM0 81 aa4.29□□□□□ -1.72
UBQLN4-202ENST00000459954 MIR7-3HGQ8N6C7 128 aa4.29□□□□□ -1.72
UBQLN4-202ENST00000459954 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 B5MCH6 92 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 NDUFC2O95298 119 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 CCL18P55774 89 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 LINC00158P58513 81 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 SS18Q15532 418 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 OXLD1Q5BKU9 147 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 LINC00337Q8N6G1 96 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 SMIM11BQ8TCY0 68 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 FAM218AQ96MZ4 157 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 LINC00167Q96N53 147 aa4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 ANK3Q12955 4377 aaKnown RBP4.28□□□□□ -1.72
UBQLN4-202ENST00000459954 IGLV4-60A0A075B6I1 120 aa4.27□□□□□ -1.73
UBQLN4-202ENST00000459954 A0A0U1RRA0 63 aa4.27□□□□□ -1.73
UBQLN4-202ENST00000459954 WFDC9Q8NEX5 89 aa4.27□□□□□ -1.73
UBQLN4-202ENST00000459954 CHCHD5Q9BSY4 110 aa4.27□□□□□ -1.73
UBQLN4-202ENST00000459954 PKD1L1Q8TDX9 2849 aa4.27□□□□□ -1.73
UBQLN4-202ENST00000459954 MGAM2Q2M2H8 2515 aa4.27□□□□□ -1.73
UBQLN4-202ENST00000459954 IGHV4-28A0A0C4DH34 117 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 LOC100131303A0A0U1RQF7 123 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 JMJD7-PLA2G4BH0Y9G9 81 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 H3BQ85 93 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 UQCRQO14949 82 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 SEC61GP60059 68 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 HIST1H4AP62805 103 aaKnown RBP4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 Q6JHZ5 121 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 PRO0255Q9UI72 69 aa4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 KLK5Q9Y337 293 aaPredicted RBP4.26□□□□□ -1.73
UBQLN4-202ENST00000459954 VWFP04275 2813 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 LYRM9A8MSI8 78 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 ATOX1O00244 68 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 C6orf226Q5I0X4 101 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 S100A7L2Q5SY68 101 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 SMCR5Q8TEV8 140 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 LINC00526Q96FQ7 95 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 ORMDL1Q9P0S3 153 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 TOMM7Q9P0U1 55 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 NOTCH3Q9UM47 2321 aa4.25□□□□□ -1.73
UBQLN4-202ENST00000459954 NBEAL1Q6ZS30 2694 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 FAM236AA0A1B0GUQ0 79 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 FAM236BA0A1B0GV22 79 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 PAX4O43316 350 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 RPL35AP18077 110 aaKnown RBP4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 CD164L2Q6UWJ8 174 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 C3orf22Q8N5N4 141 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 SS18L2Q9UHA2 77 aa4.24□□□□□ -1.73
UBQLN4-202ENST00000459954 A0A087WYN8 130 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 ZNF561-AS1K7EIQ3 104 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 TMEM256-PLSCR3K7ERE1 68 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 GYPEP15421 78 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 COX7CP15954 63 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 ATP5EP2Q5VTU8 51 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 GAGE2AQ6NT46 116 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 Q9HAA7 133 aa4.23□□□□□ -1.73
UBQLN4-202ENST00000459954 TRBV10-3A0A0K0K1G6 114 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 LECT2O14960 151 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 BCE1O60756 84 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 CCKP06307 115 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 CRYGAP11844 174 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 PFN2P35080 140 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 KIAA0087Q14695 138 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 C9orf66Q5T8R8 295 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 LYPD5Q6UWN5 251 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 LINC00482Q8N8I6 264 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 X6R8D5 127 aa4.22□□□□□ -1.73
UBQLN4-202ENST00000459954 LCE2BO14633 110 aa4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 NANOS2P60321 138 aaKnown RBP4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 KRTAP10-3P60369 221 aa4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 RPL18AQ02543 176 aaKnown RBP4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 KPRPQ5T749 579 aaPredicted RBP4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 Q8N814 137 aa4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 OR13C6PQ8NH95 151 aa4.21□□□□□ -1.74
UBQLN4-202ENST00000459954 C2orf48Q96LS8 159 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms