RNA–Protein interactions for RNA: ENST00000456222.1

SEC22C-213, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-213ENST00000456222 TOMM6Q96B49 74 aa13.07□□□□□ -0.32
SEC22C-213ENST00000456222 CLLU1Q5K131 121 aa13.06□□□□□ -0.32
SEC22C-213ENST00000456222 TIMM17AQ99595 171 aa13.05□□□□□ -0.32
SEC22C-213ENST00000456222 HERVK_113P63121 156 aa13.04□□□□□ -0.32
SEC22C-213ENST00000456222 GEMIN7Q9H840 131 aaKnown RBP13.03□□□□□ -0.32
SEC22C-213ENST00000456222 C22orf24Q9Y442 160 aa13.03□□□□□ -0.32
SEC22C-213ENST00000456222 IGLV1-50A0A075B6I6 118 aa13.01□□□□□ -0.33
SEC22C-213ENST00000456222 SMIM1B2RUZ4 78 aa13.01□□□□□ -0.33
SEC22C-213ENST00000456222 F8VRH5 84 aa13.01□□□□□ -0.33
SEC22C-213ENST00000456222 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
SEC22C-213ENST00000456222 ERASQ7Z444 233 aa13.01□□□□□ -0.33
SEC22C-213ENST00000456222 SCGB3A1Q96QR1 104 aa13.01□□□□□ -0.33
SEC22C-213ENST00000456222 TMEM218A2RU14 115 aa13□□□□□ -0.33
SEC22C-213ENST00000456222 SEC11AP67812 179 aa13□□□□□ -0.33
SEC22C-213ENST00000456222 IFITM2Q01629 132 aa12.99□□□□□ -0.33
SEC22C-213ENST00000456222 G0S2P27469 103 aa12.98□□□□□ -0.33
SEC22C-213ENST00000456222 LINC01546A6NGU7 62 aa12.97□□□□□ -0.33
SEC22C-213ENST00000456222 ZNF861PO60384 105 aa12.97□□□□□ -0.33
SEC22C-213ENST00000456222 TRAV9-1A0A075B6T8 112 aa12.96□□□□□ -0.33
SEC22C-213ENST00000456222 IGLV5-45A0A087WSX0 123 aa12.96□□□□□ -0.33
SEC22C-213ENST00000456222 TINCRA0A1B0GVN0 87 aa12.95□□□□□ -0.34
SEC22C-213ENST00000456222 UQCC3Q6UW78 93 aa12.95□□□□□ -0.34
SEC22C-213ENST00000456222 CST9LQ9H4G1 147 aa12.95□□□□□ -0.34
SEC22C-213ENST00000456222 MRPL55Q7Z7F7 128 aaKnown RBP12.94□□□□□ -0.34
SEC22C-213ENST00000456222 COX7B2Q8TF08 81 aa12.94□□□□□ -0.34
SEC22C-213ENST00000456222 GNB1LQ9BYB4 327 aa12.94□□□□□ -0.34
SEC22C-213ENST00000456222 NUPR1O60356 82 aa12.93□□□□□ -0.34
SEC22C-213ENST00000456222 SPINK8P0C7L1 97 aa12.93□□□□□ -0.34
SEC22C-213ENST00000456222 CXCL5P42830 114 aa12.93□□□□□ -0.34
SEC22C-213ENST00000456222 LBHQ53QV2 105 aaPredicted RBP12.93□□□□□ -0.34
SEC22C-213ENST00000456222 PDZD11Q5EBL8 140 aa12.93□□□□□ -0.34
SEC22C-213ENST00000456222 TP73-AS1Q9UF72 201 aa12.93□□□□□ -0.34
SEC22C-213ENST00000456222 RPL37AP8A6NKH3 93 aa12.91□□□□□ -0.34
SEC22C-213ENST00000456222 LINC00167Q96N53 147 aa12.91□□□□□ -0.34
SEC22C-213ENST00000456222 SEC11CQ9BY50 192 aa12.91□□□□□ -0.34
SEC22C-213ENST00000456222 RPL13AP40429 203 aaKnown RBP12.9□□□□□ -0.34
SEC22C-213ENST00000456222 GAGE10A6NGK3 116 aa12.89□□□□□ -0.35
SEC22C-213ENST00000456222 BCE1O60756 84 aa12.89□□□□□ -0.35
SEC22C-213ENST00000456222 S100PP25815 95 aa12.89□□□□□ -0.35
SEC22C-213ENST00000456222 RAB5BP61020 215 aa12.89□□□□□ -0.35
SEC22C-213ENST00000456222 MRPL18Q9H0U6 180 aaKnown RBP12.89□□□□□ -0.35
SEC22C-213ENST00000456222 CARHSP1Q9Y2V2 147 aaKnown RBP12.89□□□□□ -0.35
SEC22C-213ENST00000456222 A0A087X002 238 aa12.88□□□□□ -0.35
SEC22C-213ENST00000456222 PMVKQ15126 192 aa12.88□□□□□ -0.35
SEC22C-213ENST00000456222 FABP9Q0Z7S8 132 aa12.87□□□□□ -0.35
SEC22C-213ENST00000456222 FA2HQ7L5A8 372 aa12.87□□□□□ -0.35
SEC22C-213ENST00000456222 A0A096LNJ9 63 aa12.86□□□□□ -0.35
SEC22C-213ENST00000456222 SCO1O75880 301 aa12.86□□□□□ -0.35
SEC22C-213ENST00000456222 PRR4Q16378 134 aa12.85□□□□□ -0.35
SEC22C-213ENST00000456222 COMMD7Q86VX2 200 aa12.85□□□□□ -0.35
SEC22C-213ENST00000456222 URB1-AS1Q96HZ7 61 aa12.85□□□□□ -0.35
SEC22C-213ENST00000456222 LINC01549A6NIU2 74 aa12.84□□□□□ -0.35
SEC22C-213ENST00000456222 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
SEC22C-213ENST00000456222 SMCO4Q9NRQ5 59 aa12.84□□□□□ -0.35
SEC22C-213ENST00000456222 MUC2Q02817 5179 aa12.84□□□□□ -0.35
SEC22C-213ENST00000456222 IGLV5-37A0A075B6J1 123 aa12.83□□□□□ -0.36
SEC22C-213ENST00000456222 C10orf91Q5T1B1 145 aa12.83□□□□□ -0.36
SEC22C-213ENST00000456222 ANAPC11Q9NYG5 84 aa12.83□□□□□ -0.36
SEC22C-213ENST00000456222 TSPAN13O95857 204 aa12.82□□□□□ -0.36
SEC22C-213ENST00000456222 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
SEC22C-213ENST00000456222 KRTAP13-1Q8IUC0 172 aa12.82□□□□□ -0.36
SEC22C-213ENST00000456222 IGLV5-39A0A0G2JS06 123 aa12.81□□□□□ -0.36
SEC22C-213ENST00000456222 COX19Q49B96 90 aa12.81□□□□□ -0.36
SEC22C-213ENST00000456222 ZNF22P17026 224 aaPredicted RBP12.8□□□□□ -0.36
SEC22C-213ENST00000456222 RPS10P5Q9NQ39 176 aa12.8□□□□□ -0.36
SEC22C-213ENST00000456222 H3BRM9 83 aa12.79□□□□□ -0.36
SEC22C-213ENST00000456222 PFN2P35080 140 aa12.79□□□□□ -0.36
SEC22C-213ENST00000456222 PMCHL1Q16048 86 aa12.79□□□□□ -0.36
SEC22C-213ENST00000456222 ATP5LO75964 103 aa12.78□□□□□ -0.36
SEC22C-213ENST00000456222 NDUFA6P56556 154 aa12.78□□□□□ -0.36
SEC22C-213ENST00000456222 RHEBQ15382 184 aa12.78□□□□□ -0.36
SEC22C-213ENST00000456222 NKAPP1Q8N9T2 125 aa12.78□□□□□ -0.36
SEC22C-213ENST00000456222 C18orf32Q8TCD1 76 aa12.78□□□□□ -0.36
SEC22C-213ENST00000456222 IGKV2-28A0A075B6P5 120 aa12.77□□□□□ -0.37
SEC22C-213ENST00000456222 IGKV2D-28P01615 120 aa12.77□□□□□ -0.37
SEC22C-213ENST00000456222 Q8NDZ9 215 aa12.77□□□□□ -0.37
SEC22C-213ENST00000456222 CRYGAP11844 174 aa12.76□□□□□ -0.37
SEC22C-213ENST00000456222 KRTAP13-2Q52LG2 175 aa12.76□□□□□ -0.37
SEC22C-213ENST00000456222 VPREB1P12018 145 aa12.75□□□□□ -0.37
SEC22C-213ENST00000456222 TYMSOSQ8TAI1 123 aa12.75□□□□□ -0.37
SEC22C-213ENST00000456222 SND1-IT1Q9HBX3 110 aa12.75□□□□□ -0.37
SEC22C-213ENST00000456222 LINC00614P0C842 121 aa12.74□□□□□ -0.37
SEC22C-213ENST00000456222 UBE2AP49459 152 aa12.74□□□□□ -0.37
SEC22C-213ENST00000456222 ZNF625Q96I27 306 aaPredicted RBP12.74□□□□□ -0.37
SEC22C-213ENST00000456222 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
SEC22C-213ENST00000456222 C11orf86A6NJI1 115 aa12.73□□□□□ -0.37
SEC22C-213ENST00000456222 HBDP02042 147 aa12.73□□□□□ -0.37
SEC22C-213ENST00000456222 ERG28Q9UKR5 140 aa12.73□□□□□ -0.37
SEC22C-213ENST00000456222 TMEM238C9JI98 176 aa12.72□□□□□ -0.37
SEC22C-213ENST00000456222 PRLHP81277 87 aa12.71□□□□□ -0.37
SEC22C-213ENST00000456222 BAGE3Q86Y29 109 aa12.7□□□□□ -0.38
SEC22C-213ENST00000456222 TMEM126AQ9H061 195 aa12.68□□□□□ -0.38
SEC22C-213ENST00000456222 M0R378 163 aa12.67□□□□□ -0.38
SEC22C-213ENST00000456222 TMEM170BQ5T4T1 132 aa12.67□□□□□ -0.38
SEC22C-213ENST00000456222 FAM19A1Q7Z5A9 133 aa12.66□□□□□ -0.38
SEC22C-213ENST00000456222 COX17Q14061 63 aa12.65□□□□□ -0.38
SEC22C-213ENST00000456222 FAM229BQ4G0N7 80 aa12.65□□□□□ -0.38
SEC22C-213ENST00000456222 RETNLBQ9BQ08 111 aa12.65□□□□□ -0.38
SEC22C-213ENST00000456222 APOC3P02656 99 aa12.64□□□□□ -0.39
SEC22C-213ENST00000456222 RPL24P83731 157 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms