RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 FAM19A3Q7Z5A8 133 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
CLK3-203ENST00000454830 A0A087WZ39 114 aa9.42□□□□□ -0.9
CLK3-203ENST00000454830 CFAP161Q6P656 301 aa9.42□□□□□ -0.9
CLK3-203ENST00000454830 TIMM17BO60830 172 aa9.42□□□□□ -0.9
CLK3-203ENST00000454830 C2orf82Q6UX34 121 aa9.42□□□□□ -0.9
CLK3-203ENST00000454830 UBE2WQ96B02 151 aa9.42□□□□□ -0.9
CLK3-203ENST00000454830 COPS9Q8WXC6 57 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 COX7A2LO14548 114 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 CRPP02741 224 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 COX6CP09669 75 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 EGFEM1PQ0D2K5 195 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 C11orf45Q8TAV5 145 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 F8W1H4 67 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 LELP1Q5T871 98 aa9.41□□□□□ -0.9
CLK3-203ENST00000454830 DEFB131BA0A096LNP1 70 aa9.39□□□□□ -0.91
CLK3-203ENST00000454830 C9JAW5 83 aa9.39□□□□□ -0.91
CLK3-203ENST00000454830 SOSTDC1Q6X4U4 206 aa9.39□□□□□ -0.91
CLK3-203ENST00000454830 LINC00526Q96FQ7 95 aa9.39□□□□□ -0.91
CLK3-203ENST00000454830 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
CLK3-203ENST00000454830 TRIAP1O43715 76 aa9.38□□□□□ -0.91
CLK3-203ENST00000454830 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
CLK3-203ENST00000454830 GAGE12HA6NDE8 117 aa9.38□□□□□ -0.91
CLK3-203ENST00000454830 OR13C6PQ8NH95 151 aa9.38□□□□□ -0.91
CLK3-203ENST00000454830 CD164L2Q6UWJ8 174 aa9.37□□□□□ -0.91
CLK3-203ENST00000454830 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
CLK3-203ENST00000454830 WFDC10BQ8IUB3 73 aa9.36□□□□□ -0.91
CLK3-203ENST00000454830 CLEC2BQ92478 149 aa9.36□□□□□ -0.91
CLK3-203ENST00000454830 ATXN8Q156A1 80 aa9.35□□□□□ -0.91
CLK3-203ENST00000454830 J3QR89 54 aa9.34□□□□□ -0.91
CLK3-203ENST00000454830 IBA57-AS1B1ANH7 110 aa9.33□□□□□ -0.92
CLK3-203ENST00000454830 C9orf116Q5BN46 136 aaPredicted RBP9.33□□□□□ -0.92
CLK3-203ENST00000454830 SPATA25Q9BR10 227 aa9.33□□□□□ -0.92
CLK3-203ENST00000454830 SLC25A20O43772 301 aa9.33□□□□□ -0.92
CLK3-203ENST00000454830 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
CLK3-203ENST00000454830 Q8IZM0 81 aa9.32□□□□□ -0.92
CLK3-203ENST00000454830 TRBV30A0A0K0K1B3 111 aa9.32□□□□□ -0.92
CLK3-203ENST00000454830 CCL18P55774 89 aa9.32□□□□□ -0.92
CLK3-203ENST00000454830 Q9HAA7 133 aa9.31□□□□□ -0.92
CLK3-203ENST00000454830 PRO0461Q9UI25 63 aa9.31□□□□□ -0.92
CLK3-203ENST00000454830 ESRGQ1W209 222 aa9.31□□□□□ -0.92
CLK3-203ENST00000454830 LINC01620Q4KN68 170 aa9.31□□□□□ -0.92
CLK3-203ENST00000454830 C6orf223Q8N319 242 aa9.31□□□□□ -0.92
CLK3-203ENST00000454830 K7EIL1 84 aa9.3□□□□□ -0.92
CLK3-203ENST00000454830 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
CLK3-203ENST00000454830 HIGD2BQ4VC39 106 aa9.29□□□□□ -0.92
CLK3-203ENST00000454830 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
CLK3-203ENST00000454830 IGKV2D-24A0A075B6R9 120 aa9.28□□□□□ -0.92
CLK3-203ENST00000454830 TRAV13-2A0A0B4J235 113 aa9.28□□□□□ -0.92
CLK3-203ENST00000454830 FOXI1Q12951 378 aa9.28□□□□□ -0.92
CLK3-203ENST00000454830 UNQ6190/PRO20217Q6UXQ8 127 aa9.28□□□□□ -0.92
CLK3-203ENST00000454830 ANKRD29Q8N6D5 301 aa9.27□□□□□ -0.92
CLK3-203ENST00000454830 MDFIQ99750 246 aa9.27□□□□□ -0.92
CLK3-203ENST00000454830 ZNF561-AS1K7EIQ3 104 aa9.27□□□□□ -0.93
CLK3-203ENST00000454830 LINC00337Q8N6G1 96 aa9.27□□□□□ -0.93
CLK3-203ENST00000454830 PRR3P79522 188 aaKnown RBP9.26□□□□□ -0.93
CLK3-203ENST00000454830 C1orf43Q9BWL3 253 aa9.26□□□□□ -0.93
CLK3-203ENST00000454830 CXCL5P42830 114 aa9.26□□□□□ -0.93
CLK3-203ENST00000454830 NTN5Q8WTR8 489 aaPredicted RBP9.26□□□□□ -0.93
CLK3-203ENST00000454830 TEN1Q86WV5 123 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 CARD19Q96LW7 228 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 C10orf25Q5T742 122 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 STAB2Q8WWQ8 2551 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 H3BNG1 76 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 KIAA0087Q14695 138 aa9.25□□□□□ -0.93
CLK3-203ENST00000454830 IGKV2-28A0A075B6P5 120 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 IGKV2D-28P01615 120 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 PPDPFLQ8WWR9 84 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 PRR34Q9NV39 138 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 TRAV8-4A0A0B4J246 113 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 NCR3O14931 201 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 CAMK2N2Q96S95 79 aa9.23□□□□□ -0.93
CLK3-203ENST00000454830 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
CLK3-203ENST00000454830 LST1O00453 97 aa9.22□□□□□ -0.93
CLK3-203ENST00000454830 LINC01561Q8N1V8 128 aa9.22□□□□□ -0.93
CLK3-203ENST00000454830 SMIM11BQ8TCY0 68 aa9.22□□□□□ -0.93
CLK3-203ENST00000454830 DNAL4O96015 105 aa9.21□□□□□ -0.94
CLK3-203ENST00000454830 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.94
CLK3-203ENST00000454830 XAGE1AQ9HD64 81 aa9.21□□□□□ -0.94
CLK3-203ENST00000454830 KLK5Q9Y337 293 aaPredicted RBP9.21□□□□□ -0.94
CLK3-203ENST00000454830 TM2D3Q9BRN9 247 aa9.2□□□□□ -0.94
CLK3-203ENST00000454830 TEX49A0A1B0GTD5 131 aa9.2□□□□□ -0.94
CLK3-203ENST00000454830 ANK2Q01484 3957 aa9.18□□□□□ -0.94
CLK3-203ENST00000454830 C15orf53Q8NAA6 179 aa9.18□□□□□ -0.94
CLK3-203ENST00000454830 A0A1B0GV72 72 aa9.17□□□□□ -0.94
CLK3-203ENST00000454830 COX17Q14061 63 aa9.17□□□□□ -0.94
CLK3-203ENST00000454830 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
CLK3-203ENST00000454830 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
CLK3-203ENST00000454830 LINC01556Q5JQF7 62 aa9.17□□□□□ -0.94
CLK3-203ENST00000454830 FAM218AQ96MZ4 157 aa9.17□□□□□ -0.94
CLK3-203ENST00000454830 RPL28P46779 137 aaKnown RBP9.16□□□□□ -0.94
CLK3-203ENST00000454830 RPL18AQ02543 176 aaKnown RBP9.16□□□□□ -0.94
CLK3-203ENST00000454830 LINC00588Q9Y4M8 146 aa9.16□□□□□ -0.94
CLK3-203ENST00000454830 BAALC-AS2P0C853 105 aa9.16□□□□□ -0.94
CLK3-203ENST00000454830 LECT2O14960 151 aa9.15□□□□□ -0.94
CLK3-203ENST00000454830 C6orf48Q9UBA6 75 aa9.15□□□□□ -0.94
CLK3-203ENST00000454830 H3BT86 120 aa9.15□□□□□ -0.94
CLK3-203ENST00000454830 UBE2DNLQ8IWF7 75 aa9.15□□□□□ -0.95
CLK3-203ENST00000454830 A0A087WYN8 130 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms