RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C16orf95Q9H693 158 aa8.46□□□□□ -1.06
SMPD4-213ENST00000454468 DNAL4O96015 105 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 TIRAPP58753 221 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 A8MTW9 85 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 FAM19A5Q7Z5A7 132 aaPredicted RBP8.45□□□□□ -1.06
SMPD4-213ENST00000454468 Q9HAA7 133 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 SND1-IT1Q9HBX3 110 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 PRO0255Q9UI72 69 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 J3KT08 172 aa8.45□□□□□ -1.06
SMPD4-213ENST00000454468 NDUFA1O15239 70 aa8.44□□□□□ -1.06
SMPD4-213ENST00000454468 IGHV4-28A0A0C4DH34 117 aa8.44□□□□□ -1.06
SMPD4-213ENST00000454468 PRB2P02812 416 aaPredicted RBP8.44□□□□□ -1.06
SMPD4-213ENST00000454468 C19orf73Q9NVV2 129 aa8.44□□□□□ -1.06
SMPD4-213ENST00000454468 APOC4P55056 127 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 GAGE2AQ6NT46 116 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 UBE2WQ96B02 151 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 ATP5G1P05496 136 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 C1orf43Q9BWL3 253 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 RETNQ9HD89 108 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 KLK12Q9UKR0 248 aa8.43□□□□□ -1.06
SMPD4-213ENST00000454468 PLAC8L1A1L4L8 177 aa8.42□□□□□ -1.06
SMPD4-213ENST00000454468 COPS9Q8WXC6 57 aa8.42□□□□□ -1.06
SMPD4-213ENST00000454468 MRAPQ8TCY5 172 aa8.41□□□□□ -1.06
SMPD4-213ENST00000454468 LITAFQ99732 161 aa8.41□□□□□ -1.06
SMPD4-213ENST00000454468 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
SMPD4-213ENST00000454468 CSNK1G2-AS1Q8NCQ2 148 aa8.41□□□□□ -1.06
SMPD4-213ENST00000454468 SOSTDC1Q6X4U4 206 aa8.4□□□□□ -1.06
SMPD4-213ENST00000454468 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.06
SMPD4-213ENST00000454468 CELA1Q9UNI1 258 aa8.4□□□□□ -1.06
SMPD4-213ENST00000454468 C9orf116Q5BN46 136 aaPredicted RBP8.4□□□□□ -1.07
SMPD4-213ENST00000454468 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.07
SMPD4-213ENST00000454468 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.07
SMPD4-213ENST00000454468 SPANXDQ9BXN6 97 aa8.4□□□□□ -1.07
SMPD4-213ENST00000454468 SPANXCQ9NY87 97 aa8.4□□□□□ -1.07
SMPD4-213ENST00000454468 SPART-AS1P0CW21 52 aa8.39□□□□□ -1.07
SMPD4-213ENST00000454468 IGHV4-30-4P0DP06 118 aa8.39□□□□□ -1.07
SMPD4-213ENST00000454468 TRBV10-2A0A0K0K1G8 114 aa8.38□□□□□ -1.07
SMPD4-213ENST00000454468 X6R8D5 127 aa8.38□□□□□ -1.07
SMPD4-213ENST00000454468 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 SLPIP03973 132 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 BAALC-AS2P0C853 105 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 OVOL2Q9BRP0 275 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 PKIGQ9Y2B9 76 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 H7C423 109 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 REG3AQ06141 175 aa8.37□□□□□ -1.07
SMPD4-213ENST00000454468 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
SMPD4-213ENST00000454468 COX7A2LO14548 114 aa8.36□□□□□ -1.07
SMPD4-213ENST00000454468 S100A7L2Q5SY68 101 aa8.36□□□□□ -1.07
SMPD4-213ENST00000454468 FBN1P35555 2871 aaKnown RBP8.35□□□□□ -1.07
SMPD4-213ENST00000454468 IGLV5-39A0A0G2JS06 123 aa8.35□□□□□ -1.07
SMPD4-213ENST00000454468 NCR3O14931 201 aa8.35□□□□□ -1.07
SMPD4-213ENST00000454468 CCL18P55774 89 aa8.35□□□□□ -1.07
SMPD4-213ENST00000454468 IL17DQ8TAD2 202 aa8.35□□□□□ -1.07
SMPD4-213ENST00000454468 TRAV13-2A0A0B4J235 113 aa8.34□□□□□ -1.07
SMPD4-213ENST00000454468 LECT2O14960 151 aa8.34□□□□□ -1.07
SMPD4-213ENST00000454468 HIGD2BQ4VC39 106 aa8.34□□□□□ -1.07
SMPD4-213ENST00000454468 SBSPONQ8IVN8 264 aa8.34□□□□□ -1.07
SMPD4-213ENST00000454468 hADV29S1A0JD25 119 aa8.33□□□□□ -1.08
SMPD4-213ENST00000454468 IGHV3OR16-9A0A0B4J2B5 98 aa8.33□□□□□ -1.08
SMPD4-213ENST00000454468 IGLV5-45A0A087WSX0 123 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 LST1O00453 97 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 C6orf223Q8N319 242 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 LINC00337Q8N6G1 96 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 KIR2DL5BQ8NHK3 375 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 TRRAPQ9Y4A5 3859 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 LYRM9A8MSI8 78 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 TIMM17BO60830 172 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 XAGE1AQ9HD64 81 aa8.32□□□□□ -1.08
SMPD4-213ENST00000454468 TRACP01848 142 aa8.31□□□□□ -1.08
SMPD4-213ENST00000454468 DSCR8Q96T75 97 aa8.31□□□□□ -1.08
SMPD4-213ENST00000454468 SPAG11BQ08648 103 aa8.31□□□□□ -1.08
SMPD4-213ENST00000454468 SMIM11BQ8TCY0 68 aa8.31□□□□□ -1.08
SMPD4-213ENST00000454468 A0A087WZ39 114 aa8.3□□□□□ -1.08
SMPD4-213ENST00000454468 C4orf26Q17RF5 130 aa8.3□□□□□ -1.08
SMPD4-213ENST00000454468 Q6Q795 121 aa8.3□□□□□ -1.08
SMPD4-213ENST00000454468 UNQ6190/PRO20217Q6UXQ8 127 aa8.29□□□□□ -1.08
SMPD4-213ENST00000454468 KMT2BQ9UMN6 2715 aaPredicted RBP8.29□□□□□ -1.08
SMPD4-213ENST00000454468 UQCRQO14949 82 aa8.29□□□□□ -1.08
SMPD4-213ENST00000454468 IGKV2D-24A0A075B6R9 120 aa8.28□□□□□ -1.08
SMPD4-213ENST00000454468 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
SMPD4-213ENST00000454468 FAM218AQ96MZ4 157 aa8.28□□□□□ -1.08
SMPD4-213ENST00000454468 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
SMPD4-213ENST00000454468 Q6ZTC4 211 aa8.28□□□□□ -1.08
SMPD4-213ENST00000454468 C14orf132Q9NPU4 83 aa8.28□□□□□ -1.08
SMPD4-213ENST00000454468 IBA57-AS1B1ANH7 110 aa8.27□□□□□ -1.08
SMPD4-213ENST00000454468 H3BT86 120 aa8.27□□□□□ -1.08
SMPD4-213ENST00000454468 MIFP14174 115 aa8.27□□□□□ -1.08
SMPD4-213ENST00000454468 RPL18AQ02543 176 aaKnown RBP8.27□□□□□ -1.08
SMPD4-213ENST00000454468 A0A087WYN8 130 aa8.27□□□□□ -1.09
SMPD4-213ENST00000454468 NANOS2P60321 138 aaKnown RBP8.27□□□□□ -1.09
SMPD4-213ENST00000454468 PKD1L1Q8TDX9 2849 aa8.26□□□□□ -1.09
SMPD4-213ENST00000454468 KPRPQ5T749 579 aaPredicted RBP8.26□□□□□ -1.09
SMPD4-213ENST00000454468 CD164L2Q6UWJ8 174 aa8.26□□□□□ -1.09
SMPD4-213ENST00000454468 A0A0U1RQV1 116 aa8.25□□□□□ -1.09
SMPD4-213ENST00000454468 BAHCC1Q9P281 2608 aa8.25□□□□□ -1.09
SMPD4-213ENST00000454468 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
SMPD4-213ENST00000454468 IGKV2-28A0A075B6P5 120 aa8.24□□□□□ -1.09
SMPD4-213ENST00000454468 A0A0J9YWU9 116 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms