RNA–Protein interactions for RNA: ENST00000454137.5

MSH6-205, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 725 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-205ENST00000454137 COPS9Q8WXC6 57 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 ICOSQ9Y6W8 199 aa4.21□□□□□ -1.74
MSH6-205ENST00000454137 IGLV5-39A0A0G2JS06 123 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 LOC100131303A0A0U1RQF7 123 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 H3BT86 120 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 H7C2G1 150 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 DEFB4AO15263 64 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 COX6CP09669 75 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 NHLRC4P0CG21 123 aaPredicted RBP4.2□□□□□ -1.74
MSH6-205ENST00000454137 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
MSH6-205ENST00000454137 CIRBPQ14011 172 aaKnown RBP4.2□□□□□ -1.74
MSH6-205ENST00000454137 RNASE13Q5GAN3 156 aaKnown RBP4.2□□□□□ -1.74
MSH6-205ENST00000454137 PPDPFQ9H3Y8 114 aa4.2□□□□□ -1.74
MSH6-205ENST00000454137 TRBV6-8A0A0A6YYG3 113 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 PRSS2P07478 247 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 MRPL23Q16540 153 aaKnown RBP4.19□□□□□ -1.74
MSH6-205ENST00000454137 ADAMTSL4-AS1Q5T5F5 129 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 NTM-AS1Q6ZSK4 140 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 B9D2Q9BPU9 175 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 CDKN2A-AS1Q9UH64 79 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 CELA1Q9UNI1 258 aa4.19□□□□□ -1.74
MSH6-205ENST00000454137 A0A1B0GUV1 79 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 LST1O00453 97 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 MT-ATP8P03928 68 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 XGP55808 180 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 LINC00242Q5T6M2 205 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 UBE2WQ96B02 151 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 TMEM101Q96IK0 257 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 TMEM243Q9BU79 118 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 RETNQ9HD89 108 aa4.18□□□□□ -1.74
MSH6-205ENST00000454137 TENM3Q9P273 2699 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 TRAV8-4A0A0B4J246 113 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 SMIM1B2RUZ4 78 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 CKS1BP61024 79 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 HERV-K104P63124 156 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 DEFB121Q5J5C9 76 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 C2orf82Q6UX34 121 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 C11orf45Q8TAV5 145 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 LINC00308Q8TCZ7 52 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 NTN5Q8WTR8 489 aaPredicted RBP4.17□□□□□ -1.74
MSH6-205ENST00000454137 Q9H8V8 135 aa4.17□□□□□ -1.74
MSH6-205ENST00000454137 TRAV10A0A0B4J240 114 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 A0A0J9YWU9 116 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 FAM240AA0A1B0GVK7 77 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 F5H768 121 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 UBE2L6O14933 153 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 C15orf53Q8NAA6 179 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 MRAPQ8TCY5 172 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 ZNF625Q96I27 306 aaPredicted RBP4.16□□□□□ -1.74
MSH6-205ENST00000454137 CDC42SE2Q9NRR3 84 aa4.16□□□□□ -1.74
MSH6-205ENST00000454137 A0A096LPF7 62 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 TRAV13-1A0A0B4J241 112 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 COX7A2LO14548 114 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 SNCGO76070 127 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 NPC2P61916 151 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 COX6A2Q02221 97 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 MEIG1Q5JSS6 88 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 LELP1Q5T871 98 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 Q6ZTC4 211 aa4.15□□□□□ -1.75
MSH6-205ENST00000454137 COL7A1Q02388 2944 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 DEFB131BA0A096LNP1 70 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 TEX49A0A1B0GTD5 131 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 PRB2P02812 416 aaPredicted RBP4.14□□□□□ -1.75
MSH6-205ENST00000454137 HTN3P15516 51 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 GAGE6Q13070 117 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 Q6Q795 121 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 DAND5Q8N907 189 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 CLEC2BQ92478 149 aa4.14□□□□□ -1.75
MSH6-205ENST00000454137 TRACP01848 142 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 NANOS2P60321 138 aaKnown RBP4.13□□□□□ -1.75
MSH6-205ENST00000454137 GAGE2BQ13066 116 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 GAGE2EQ4V326 116 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 LYPD5Q6UWN5 251 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 SOSTDC1Q6X4U4 206 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 LINC01561Q8N1V8 128 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 CHCHD5Q9BSY4 110 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 GAGE2DQ9UEU5 116 aa4.13□□□□□ -1.75
MSH6-205ENST00000454137 IGLV4-60A0A075B6I1 120 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 TRAV13-2A0A0B4J235 113 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 CRPP02741 224 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 ACYP1P07311 99 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 COX7B2Q8TF08 81 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 LINC00476Q8WZB0 136 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 ANAPC13Q9BS18 74 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 KRTAP3-1Q9BYR8 98 aa4.12□□□□□ -1.75
MSH6-205ENST00000454137 HUWE1Q7Z6Z7 4374 aaKnown RBP4.11□□□□□ -1.75
MSH6-205ENST00000454137 PRR34Q9NV39 138 aa4.11□□□□□ -1.75
MSH6-205ENST00000454137 STAB2Q8WWQ8 2551 aa4.11□□□□□ -1.75
MSH6-205ENST00000454137 MEGF8Q7Z7M0 2845 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 A0A087WZ39 114 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 A0A0U1RRA0 63 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 IBA57-AS1B1ANH7 110 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 RPL28P46779 137 aaKnown RBP4.1□□□□□ -1.75
MSH6-205ENST00000454137 NDUFV3P56181 108 aaKnown RBP4.1□□□□□ -1.75
MSH6-205ENST00000454137 SS18Q15532 418 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 UPK3BQ9BT76 320 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 DNAH9Q9NYC9 4486 aa4.1□□□□□ -1.75
MSH6-205ENST00000454137 IGHV3OR16-9A0A0B4J2B5 98 aa4.09□□□□□ -1.75
MSH6-205ENST00000454137 IGKV3OR2-268A0A0C4DH90 116 aa4.09□□□□□ -1.75
MSH6-205ENST00000454137 TRBV7-7A0A0K0K1E9 115 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms