RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 UBE2BP63146 152 aa10.49□□□□□ -0.73
TNFRSF4-202ENST00000453580 F8VRH5 84 aa10.48□□□□□ -0.73
TNFRSF4-202ENST00000453580 ODF1Q14990 250 aa10.48□□□□□ -0.73
TNFRSF4-202ENST00000453580 RHEBQ15382 184 aa10.48□□□□□ -0.73
TNFRSF4-202ENST00000453580 ZC2HC1BQ5TFG8 222 aa10.48□□□□□ -0.73
TNFRSF4-202ENST00000453580 SMCO4Q9NRQ5 59 aa10.48□□□□□ -0.73
TNFRSF4-202ENST00000453580 CDKN2A-AS1Q9UH64 79 aa10.48□□□□□ -0.73
TNFRSF4-202ENST00000453580 FAM168BA1KXE4 195 aa10.47□□□□□ -0.73
TNFRSF4-202ENST00000453580 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
TNFRSF4-202ENST00000453580 IFITM2Q01629 132 aa10.47□□□□□ -0.73
TNFRSF4-202ENST00000453580 FA2HQ7L5A8 372 aa10.47□□□□□ -0.73
TNFRSF4-202ENST00000453580 COMMD7Q86VX2 200 aa10.47□□□□□ -0.73
TNFRSF4-202ENST00000453580 TINCRA0A1B0GVN0 87 aa10.46□□□□□ -0.73
TNFRSF4-202ENST00000453580 PDZD11Q5EBL8 140 aa10.46□□□□□ -0.73
TNFRSF4-202ENST00000453580 LINC00469Q8N7U9 141 aa10.46□□□□□ -0.73
TNFRSF4-202ENST00000453580 FABP9Q0Z7S8 132 aa10.45□□□□□ -0.74
TNFRSF4-202ENST00000453580 LBHQ53QV2 105 aaPredicted RBP10.45□□□□□ -0.74
TNFRSF4-202ENST00000453580 MRPL18Q9H0U6 180 aaKnown RBP10.44□□□□□ -0.74
TNFRSF4-202ENST00000453580 RPS10P5Q9NQ39 176 aa10.44□□□□□ -0.74
TNFRSF4-202ENST00000453580 H3BRM9 83 aa10.43□□□□□ -0.74
TNFRSF4-202ENST00000453580 PMVKQ15126 192 aa10.43□□□□□ -0.74
TNFRSF4-202ENST00000453580 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
TNFRSF4-202ENST00000453580 C10orf91Q5T1B1 145 aa10.43□□□□□ -0.74
TNFRSF4-202ENST00000453580 CARHSP1Q9Y2V2 147 aaKnown RBP10.43□□□□□ -0.74
TNFRSF4-202ENST00000453580 IGLV5-45A0A087WSX0 123 aa10.42□□□□□ -0.74
TNFRSF4-202ENST00000453580 H0Y9J4 135 aa10.42□□□□□ -0.74
TNFRSF4-202ENST00000453580 CST9LQ9H4G1 147 aa10.42□□□□□ -0.74
TNFRSF4-202ENST00000453580 NUPR1O60356 82 aa10.41□□□□□ -0.74
TNFRSF4-202ENST00000453580 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
TNFRSF4-202ENST00000453580 TP73-AS1Q9UF72 201 aa10.41□□□□□ -0.74
TNFRSF4-202ENST00000453580 SMIM1B2RUZ4 78 aa10.4□□□□□ -0.74
TNFRSF4-202ENST00000453580 IGLV1-50A0A075B6I6 118 aa10.39□□□□□ -0.75
TNFRSF4-202ENST00000453580 NDUFA5Q16718 116 aa10.39□□□□□ -0.75
TNFRSF4-202ENST00000453580 KRTAP7-1Q8IUC3 87 aa10.39□□□□□ -0.75
TNFRSF4-202ENST00000453580 RAB5BP61020 215 aa10.38□□□□□ -0.75
TNFRSF4-202ENST00000453580 XAGE1AQ9HD64 81 aa10.38□□□□□ -0.75
TNFRSF4-202ENST00000453580 C22orf24Q9Y442 160 aa10.38□□□□□ -0.75
TNFRSF4-202ENST00000453580 RPL13AP40429 203 aaKnown RBP10.37□□□□□ -0.75
TNFRSF4-202ENST00000453580 TRAPPC1Q9Y5R8 145 aa10.37□□□□□ -0.75
TNFRSF4-202ENST00000453580 HMCN2Q8NDA2 5059 aa10.37□□□□□ -0.75
TNFRSF4-202ENST00000453580 ATP5LO75964 103 aa10.36□□□□□ -0.75
TNFRSF4-202ENST00000453580 SNAPINO95295 136 aa10.36□□□□□ -0.75
TNFRSF4-202ENST00000453580 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
TNFRSF4-202ENST00000453580 LINC00614P0C842 121 aa10.35□□□□□ -0.75
TNFRSF4-202ENST00000453580 MRPL55Q7Z7F7 128 aaKnown RBP10.35□□□□□ -0.75
TNFRSF4-202ENST00000453580 ZNF861PO60384 105 aa10.34□□□□□ -0.75
TNFRSF4-202ENST00000453580 HBDP02042 147 aa10.34□□□□□ -0.75
TNFRSF4-202ENST00000453580 SFTA2Q6UW10 78 aa10.34□□□□□ -0.75
TNFRSF4-202ENST00000453580 SVBPQ8N300 66 aa10.34□□□□□ -0.75
TNFRSF4-202ENST00000453580 SPINK8P0C7L1 97 aa10.33□□□□□ -0.76
TNFRSF4-202ENST00000453580 IGLC3P0DOY3 106 aa10.33□□□□□ -0.76
TNFRSF4-202ENST00000453580 NDUFA6P56556 154 aa10.33□□□□□ -0.76
TNFRSF4-202ENST00000453580 APOC3P02656 99 aa10.32□□□□□ -0.76
TNFRSF4-202ENST00000453580 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
TNFRSF4-202ENST00000453580 PRR26Q8N8Z3 221 aa10.32□□□□□ -0.76
TNFRSF4-202ENST00000453580 C18orf32Q8TCD1 76 aa10.32□□□□□ -0.76
TNFRSF4-202ENST00000453580 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
TNFRSF4-202ENST00000453580 TNXBP22105 4242 aa10.31□□□□□ -0.76
TNFRSF4-202ENST00000453580 IGLV5-37A0A075B6J1 123 aa10.29□□□□□ -0.76
TNFRSF4-202ENST00000453580 BCE1O60756 84 aa10.29□□□□□ -0.76
TNFRSF4-202ENST00000453580 COX17Q14061 63 aa10.29□□□□□ -0.76
TNFRSF4-202ENST00000453580 IGLV5-39A0A0G2JS06 123 aa10.28□□□□□ -0.76
TNFRSF4-202ENST00000453580 KRTAP1-4P0C5Y4 121 aa10.27□□□□□ -0.77
TNFRSF4-202ENST00000453580 LINC00167Q96N53 147 aa10.27□□□□□ -0.77
TNFRSF4-202ENST00000453580 A0A096LNJ9 63 aa10.26□□□□□ -0.77
TNFRSF4-202ENST00000453580 ZNF22P17026 224 aaPredicted RBP10.26□□□□□ -0.77
TNFRSF4-202ENST00000453580 BAGE3Q86Y29 109 aa10.26□□□□□ -0.77
TNFRSF4-202ENST00000453580 PFN2P35080 140 aa10.25□□□□□ -0.77
TNFRSF4-202ENST00000453580 RPL24P83731 157 aaKnown RBP10.25□□□□□ -0.77
TNFRSF4-202ENST00000453580 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
TNFRSF4-202ENST00000453580 TMEM170BQ5T4T1 132 aa10.24□□□□□ -0.77
TNFRSF4-202ENST00000453580 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
TNFRSF4-202ENST00000453580 ERG28Q9UKR5 140 aa10.24□□□□□ -0.77
TNFRSF4-202ENST00000453580 RPL37AP8A6NKH3 93 aa10.23□□□□□ -0.77
TNFRSF4-202ENST00000453580 UBE2AP49459 152 aa10.22□□□□□ -0.77
TNFRSF4-202ENST00000453580 PMCHL1Q16048 86 aa10.22□□□□□ -0.77
TNFRSF4-202ENST00000453580 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
TNFRSF4-202ENST00000453580 GAGE10A6NGK3 116 aa10.21□□□□□ -0.77
TNFRSF4-202ENST00000453580 TRAV12-1A0A0B4J245 112 aa10.2□□□□□ -0.78
TNFRSF4-202ENST00000453580 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
TNFRSF4-202ENST00000453580 CRYGAP11844 174 aa10.2□□□□□ -0.78
TNFRSF4-202ENST00000453580 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
TNFRSF4-202ENST00000453580 IFI27L1Q96BM0 104 aa10.19□□□□□ -0.78
TNFRSF4-202ENST00000453580 UBR4Q5T4S7 5183 aa10.18□□□□□ -0.78
TNFRSF4-202ENST00000453580 LINC00587B1AMM8 73 aa10.17□□□□□ -0.78
TNFRSF4-202ENST00000453580 HSBP1O75506 76 aa10.17□□□□□ -0.78
TNFRSF4-202ENST00000453580 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
TNFRSF4-202ENST00000453580 ATP6V1G1O75348 118 aa10.16□□□□□ -0.78
TNFRSF4-202ENST00000453580 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
TNFRSF4-202ENST00000453580 VPREB1P12018 145 aa10.16□□□□□ -0.78
TNFRSF4-202ENST00000453580 ZNF625Q96I27 306 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF4-202ENST00000453580 LINC00158P58513 81 aa10.15□□□□□ -0.78
TNFRSF4-202ENST00000453580 FAM229BQ4G0N7 80 aa10.15□□□□□ -0.78
TNFRSF4-202ENST00000453580 TYMSOSQ8TAI1 123 aa10.15□□□□□ -0.78
TNFRSF4-202ENST00000453580 TMEM223A0PJW6 202 aa10.14□□□□□ -0.79
TNFRSF4-202ENST00000453580 YPEL4Q96NS1 127 aa10.14□□□□□ -0.79
TNFRSF4-202ENST00000453580 HERV-K104P63124 156 aa10.13□□□□□ -0.79
TNFRSF4-202ENST00000453580 FAM19A1Q7Z5A9 133 aa10.13□□□□□ -0.79
TNFRSF4-202ENST00000453580 KRTAP13-1Q8IUC0 172 aa10.13□□□□□ -0.79
TNFRSF4-202ENST00000453580 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms