RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 CDKN2A-AS1Q9UH64 79 aa10.86□□□□□ -0.67
DDX56-207ENST00000448192 KRTAP10-8P60410 259 aa10.84□□□□□ -0.67
DDX56-207ENST00000448192 KRTAP11-1Q8IUC1 163 aa10.84□□□□□ -0.67
DDX56-207ENST00000448192 Q8IZM0 81 aa10.84□□□□□ -0.67
DDX56-207ENST00000448192 M0QXV9 152 aa10.83□□□□□ -0.68
DDX56-207ENST00000448192 C9orf129Q5T035 196 aaKnown RBP10.83□□□□□ -0.68
DDX56-207ENST00000448192 KRTAP7-1Q8IUC3 87 aa10.83□□□□□ -0.68
DDX56-207ENST00000448192 RPS10P5Q9NQ39 176 aa10.83□□□□□ -0.68
DDX56-207ENST00000448192 IGLV7-43P04211 117 aa10.82□□□□□ -0.68
DDX56-207ENST00000448192 UBE2BP63146 152 aa10.82□□□□□ -0.68
DDX56-207ENST00000448192 FABP9Q0Z7S8 132 aa10.82□□□□□ -0.68
DDX56-207ENST00000448192 COX19Q49B96 90 aa10.82□□□□□ -0.68
DDX56-207ENST00000448192 LINC00469Q8N7U9 141 aa10.82□□□□□ -0.68
DDX56-207ENST00000448192 MRPL18Q9H0U6 180 aaKnown RBP10.82□□□□□ -0.68
DDX56-207ENST00000448192 RHEBQ15382 184 aa10.81□□□□□ -0.68
DDX56-207ENST00000448192 C10orf91Q5T1B1 145 aa10.81□□□□□ -0.68
DDX56-207ENST00000448192 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
DDX56-207ENST00000448192 SMCO4Q9NRQ5 59 aa10.81□□□□□ -0.68
DDX56-207ENST00000448192 LINC01546A6NGU7 62 aa10.8□□□□□ -0.68
DDX56-207ENST00000448192 LINC01549A6NIU2 74 aa10.8□□□□□ -0.68
DDX56-207ENST00000448192 TINCRA0A1B0GVN0 87 aa10.79□□□□□ -0.68
DDX56-207ENST00000448192 F8VRH5 84 aa10.79□□□□□ -0.68
DDX56-207ENST00000448192 DIRC1Q969H9 104 aa10.79□□□□□ -0.68
DDX56-207ENST00000448192 CARHSP1Q9Y2V2 147 aaKnown RBP10.79□□□□□ -0.68
DDX56-207ENST00000448192 CST9LQ9H4G1 147 aa10.78□□□□□ -0.68
DDX56-207ENST00000448192 XAGE1AQ9HD64 81 aa10.78□□□□□ -0.68
DDX56-207ENST00000448192 SMIM1B2RUZ4 78 aa10.77□□□□□ -0.69
DDX56-207ENST00000448192 PMVKQ15126 192 aa10.76□□□□□ -0.69
DDX56-207ENST00000448192 PDZD11Q5EBL8 140 aa10.76□□□□□ -0.69
DDX56-207ENST00000448192 CXCL5P42830 114 aa10.75□□□□□ -0.69
DDX56-207ENST00000448192 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
DDX56-207ENST00000448192 IGLV5-45A0A087WSX0 123 aa10.74□□□□□ -0.69
DDX56-207ENST00000448192 H0Y9J4 135 aa10.74□□□□□ -0.69
DDX56-207ENST00000448192 SPINK8P0C7L1 97 aa10.74□□□□□ -0.69
DDX56-207ENST00000448192 C22orf24Q9Y442 160 aa10.74□□□□□ -0.69
DDX56-207ENST00000448192 TRAPPC1Q9Y5R8 145 aa10.74□□□□□ -0.69
DDX56-207ENST00000448192 LRP2P98164 4655 aa10.72□□□□□ -0.69
DDX56-207ENST00000448192 APOC3P02656 99 aa10.72□□□□□ -0.69
DDX56-207ENST00000448192 NDUFA6P56556 154 aa10.72□□□□□ -0.69
DDX56-207ENST00000448192 PRR26Q8N8Z3 221 aa10.72□□□□□ -0.69
DDX56-207ENST00000448192 LBHQ53QV2 105 aaPredicted RBP10.71□□□□□ -0.69
DDX56-207ENST00000448192 C18orf32Q8TCD1 76 aa10.71□□□□□ -0.69
DDX56-207ENST00000448192 H3BRM9 83 aa10.7□□□□□ -0.7
DDX56-207ENST00000448192 LINC00614P0C842 121 aa10.7□□□□□ -0.7
DDX56-207ENST00000448192 RAB5BP61020 215 aa10.7□□□□□ -0.7
DDX56-207ENST00000448192 URB1-AS1Q96HZ7 61 aa10.7□□□□□ -0.7
DDX56-207ENST00000448192 A0A096LNJ9 63 aa10.69□□□□□ -0.7
DDX56-207ENST00000448192 PMCHL1Q16048 86 aa10.68□□□□□ -0.7
DDX56-207ENST00000448192 NDUFA5Q16718 116 aa10.68□□□□□ -0.7
DDX56-207ENST00000448192 SNAPINO95295 136 aa10.67□□□□□ -0.7
DDX56-207ENST00000448192 HBDP02042 147 aa10.67□□□□□ -0.7
DDX56-207ENST00000448192 IGLC3P0DOY3 106 aa10.67□□□□□ -0.7
DDX56-207ENST00000448192 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
DDX56-207ENST00000448192 NUPR1O60356 82 aa10.66□□□□□ -0.7
DDX56-207ENST00000448192 SVBPQ8N300 66 aa10.66□□□□□ -0.7
DDX56-207ENST00000448192 TP73-AS1Q9UF72 201 aa10.66□□□□□ -0.7
DDX56-207ENST00000448192 ZNF861PO60384 105 aa10.65□□□□□ -0.7
DDX56-207ENST00000448192 ATP5LO75964 103 aa10.65□□□□□ -0.7
DDX56-207ENST00000448192 KRTAP1-4P0C5Y4 121 aa10.65□□□□□ -0.7
DDX56-207ENST00000448192 IGLV1-50A0A075B6I6 118 aa10.64□□□□□ -0.71
DDX56-207ENST00000448192 RPL37AP8A6NKH3 93 aa10.64□□□□□ -0.71
DDX56-207ENST00000448192 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
DDX56-207ENST00000448192 GAGE10A6NGK3 116 aa10.63□□□□□ -0.71
DDX56-207ENST00000448192 LINC00167Q96N53 147 aa10.63□□□□□ -0.71
DDX56-207ENST00000448192 IGLV5-39A0A0G2JS06 123 aa10.62□□□□□ -0.71
DDX56-207ENST00000448192 PFN2P35080 140 aa10.62□□□□□ -0.71
DDX56-207ENST00000448192 BAGE3Q86Y29 109 aa10.62□□□□□ -0.71
DDX56-207ENST00000448192 NKAPP1Q8N9T2 125 aa10.61□□□□□ -0.71
DDX56-207ENST00000448192 BCE1O60756 84 aa10.6□□□□□ -0.71
DDX56-207ENST00000448192 TMEM170BQ5T4T1 132 aa10.6□□□□□ -0.71
DDX56-207ENST00000448192 C11orf86A6NJI1 115 aa10.59□□□□□ -0.71
DDX56-207ENST00000448192 RPL28P46779 137 aaKnown RBP10.59□□□□□ -0.71
DDX56-207ENST00000448192 RNF213Q63HN8 5207 aa10.58□□□□□ -0.72
DDX56-207ENST00000448192 IGLV5-37A0A075B6J1 123 aa10.58□□□□□ -0.72
DDX56-207ENST00000448192 RPL13AP40429 203 aaKnown RBP10.58□□□□□ -0.72
DDX56-207ENST00000448192 ZNF625Q96I27 306 aaPredicted RBP10.58□□□□□ -0.72
DDX56-207ENST00000448192 ERG28Q9UKR5 140 aa10.58□□□□□ -0.72
DDX56-207ENST00000448192 YPEL4Q96NS1 127 aa10.57□□□□□ -0.72
DDX56-207ENST00000448192 CHTOPQ9Y3Y2 248 aaKnown RBP10.57□□□□□ -0.72
DDX56-207ENST00000448192 LPAP08519 4548 aa10.57□□□□□ -0.72
DDX56-207ENST00000448192 SCO1O75880 301 aa10.56□□□□□ -0.72
DDX56-207ENST00000448192 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
DDX56-207ENST00000448192 CHCHD1Q96BP2 118 aaKnown RBP10.55□□□□□ -0.72
DDX56-207ENST00000448192 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
DDX56-207ENST00000448192 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
DDX56-207ENST00000448192 COX17Q14061 63 aa10.54□□□□□ -0.72
DDX56-207ENST00000448192 UBE2AP49459 152 aa10.53□□□□□ -0.72
DDX56-207ENST00000448192 IFI27L1Q96BM0 104 aa10.53□□□□□ -0.72
DDX56-207ENST00000448192 SFTA2Q6UW10 78 aa10.52□□□□□ -0.73
DDX56-207ENST00000448192 CBLN2Q8IUK8 224 aa10.52□□□□□ -0.73
DDX56-207ENST00000448192 VPREB1P12018 145 aa10.51□□□□□ -0.73
DDX56-207ENST00000448192 RPL24P83731 157 aaKnown RBP10.51□□□□□ -0.73
DDX56-207ENST00000448192 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
DDX56-207ENST00000448192 A0A087X002 238 aa10.49□□□□□ -0.73
DDX56-207ENST00000448192 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
DDX56-207ENST00000448192 HSBP1O75506 76 aa10.49□□□□□ -0.73
DDX56-207ENST00000448192 LINC00158P58513 81 aa10.49□□□□□ -0.73
DDX56-207ENST00000448192 FAM19A2Q8N3H0 131 aa10.49□□□□□ -0.73
DDX56-207ENST00000448192 A0A0U1RRA0 63 aa10.48□□□□□ -0.73
DDX56-207ENST00000448192 CRYGAP11844 174 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms