RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 TOMM6Q96B49 74 aa10.96□□□□□ -0.65
COL9A1-205ENST00000447041 TIMM17AQ99595 171 aa10.96□□□□□ -0.65
COL9A1-205ENST00000447041 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
COL9A1-205ENST00000447041 XAGE1AQ9HD64 81 aa10.95□□□□□ -0.66
COL9A1-205ENST00000447041 SEC11AP67812 179 aa10.94□□□□□ -0.66
COL9A1-205ENST00000447041 PAPPA-AS1Q5QFB9 102 aa10.94□□□□□ -0.66
COL9A1-205ENST00000447041 GEMIN7Q9H840 131 aaKnown RBP10.94□□□□□ -0.66
COL9A1-205ENST00000447041 C22orf24Q9Y442 160 aa10.93□□□□□ -0.66
COL9A1-205ENST00000447041 IGLV1-50A0A075B6I6 118 aa10.92□□□□□ -0.66
COL9A1-205ENST00000447041 F8VRH5 84 aa10.92□□□□□ -0.66
COL9A1-205ENST00000447041 G0S2P27469 103 aa10.92□□□□□ -0.66
COL9A1-205ENST00000447041 ERASQ7Z444 233 aa10.91□□□□□ -0.66
COL9A1-205ENST00000447041 SCGB3A1Q96QR1 104 aa10.91□□□□□ -0.66
COL9A1-205ENST00000447041 SMIM1B2RUZ4 78 aa10.9□□□□□ -0.66
COL9A1-205ENST00000447041 TRAV9-1A0A075B6T8 112 aa10.89□□□□□ -0.67
COL9A1-205ENST00000447041 TMEM218A2RU14 115 aa10.89□□□□□ -0.67
COL9A1-205ENST00000447041 CXCL5P42830 114 aa10.89□□□□□ -0.67
COL9A1-205ENST00000447041 NUPR1O60356 82 aa10.88□□□□□ -0.67
COL9A1-205ENST00000447041 ZNF861PO60384 105 aa10.88□□□□□ -0.67
COL9A1-205ENST00000447041 UQCC3Q6UW78 93 aa10.88□□□□□ -0.67
COL9A1-205ENST00000447041 TINCRA0A1B0GVN0 87 aa10.87□□□□□ -0.67
COL9A1-205ENST00000447041 IGLV5-45A0A087WSX0 123 aa10.86□□□□□ -0.67
COL9A1-205ENST00000447041 LINC01546A6NGU7 62 aa10.86□□□□□ -0.67
COL9A1-205ENST00000447041 LBHQ53QV2 105 aaPredicted RBP10.86□□□□□ -0.67
COL9A1-205ENST00000447041 PDZD11Q5EBL8 140 aa10.86□□□□□ -0.67
COL9A1-205ENST00000447041 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
COL9A1-205ENST00000447041 COX7B2Q8TF08 81 aa10.86□□□□□ -0.67
COL9A1-205ENST00000447041 GNB1LQ9BYB4 327 aa10.86□□□□□ -0.67
COL9A1-205ENST00000447041 RPL13AP40429 203 aaKnown RBP10.85□□□□□ -0.67
COL9A1-205ENST00000447041 IFITM2Q01629 132 aa10.85□□□□□ -0.67
COL9A1-205ENST00000447041 TP73-AS1Q9UF72 201 aa10.85□□□□□ -0.67
COL9A1-205ENST00000447041 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
COL9A1-205ENST00000447041 S100PP25815 95 aa10.84□□□□□ -0.67
COL9A1-205ENST00000447041 CST9LQ9H4G1 147 aa10.84□□□□□ -0.67
COL9A1-205ENST00000447041 SEC11CQ9BY50 192 aa10.83□□□□□ -0.68
COL9A1-205ENST00000447041 CARHSP1Q9Y2V2 147 aaKnown RBP10.83□□□□□ -0.68
COL9A1-205ENST00000447041 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
COL9A1-205ENST00000447041 LINC01549A6NIU2 74 aa10.81□□□□□ -0.68
COL9A1-205ENST00000447041 RPL37AP8A6NKH3 93 aa10.81□□□□□ -0.68
COL9A1-205ENST00000447041 BCE1O60756 84 aa10.81□□□□□ -0.68
COL9A1-205ENST00000447041 PMVKQ15126 192 aa10.81□□□□□ -0.68
COL9A1-205ENST00000447041 FA2HQ7L5A8 372 aa10.81□□□□□ -0.68
COL9A1-205ENST00000447041 MRPL18Q9H0U6 180 aaKnown RBP10.81□□□□□ -0.68
COL9A1-205ENST00000447041 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
COL9A1-205ENST00000447041 RAB5BP61020 215 aa10.8□□□□□ -0.68
COL9A1-205ENST00000447041 SMCO4Q9NRQ5 59 aa10.8□□□□□ -0.68
COL9A1-205ENST00000447041 RPL28P46779 137 aaKnown RBP10.79□□□□□ -0.68
COL9A1-205ENST00000447041 FABP9Q0Z7S8 132 aa10.79□□□□□ -0.68
COL9A1-205ENST00000447041 A0A087X002 238 aa10.78□□□□□ -0.68
COL9A1-205ENST00000447041 PRR4Q16378 134 aa10.78□□□□□ -0.68
COL9A1-205ENST00000447041 COX19Q49B96 90 aa10.78□□□□□ -0.68
COL9A1-205ENST00000447041 COMMD7Q86VX2 200 aa10.78□□□□□ -0.68
COL9A1-205ENST00000447041 IGLV5-37A0A075B6J1 123 aa10.77□□□□□ -0.69
COL9A1-205ENST00000447041 A0A096LNJ9 63 aa10.77□□□□□ -0.69
COL9A1-205ENST00000447041 H3BRM9 83 aa10.76□□□□□ -0.69
COL9A1-205ENST00000447041 IGLC3P0DOY3 106 aa10.76□□□□□ -0.69
COL9A1-205ENST00000447041 SCO1O75880 301 aa10.75□□□□□ -0.69
COL9A1-205ENST00000447041 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
COL9A1-205ENST00000447041 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
COL9A1-205ENST00000447041 ATP5LO75964 103 aa10.74□□□□□ -0.69
COL9A1-205ENST00000447041 TSPAN13O95857 204 aa10.74□□□□□ -0.69
COL9A1-205ENST00000447041 C10orf91Q5T1B1 145 aa10.74□□□□□ -0.69
COL9A1-205ENST00000447041 RPS10P5Q9NQ39 176 aa10.74□□□□□ -0.69
COL9A1-205ENST00000447041 IGLV5-39A0A0G2JS06 123 aa10.73□□□□□ -0.69
COL9A1-205ENST00000447041 ZNF22P17026 224 aaPredicted RBP10.73□□□□□ -0.69
COL9A1-205ENST00000447041 PFN2P35080 140 aa10.73□□□□□ -0.69
COL9A1-205ENST00000447041 NDUFA6P56556 154 aa10.73□□□□□ -0.69
COL9A1-205ENST00000447041 RHEBQ15382 184 aa10.73□□□□□ -0.69
COL9A1-205ENST00000447041 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
COL9A1-205ENST00000447041 ANAPC11Q9NYG5 84 aa10.73□□□□□ -0.69
COL9A1-205ENST00000447041 IGKV2-28A0A075B6P5 120 aa10.72□□□□□ -0.69
COL9A1-205ENST00000447041 IGKV2D-28P01615 120 aa10.72□□□□□ -0.69
COL9A1-205ENST00000447041 C18orf32Q8TCD1 76 aa10.72□□□□□ -0.69
COL9A1-205ENST00000447041 CRYGAP11844 174 aa10.71□□□□□ -0.69
COL9A1-205ENST00000447041 UBE2AP49459 152 aa10.71□□□□□ -0.69
COL9A1-205ENST00000447041 PMCHL1Q16048 86 aa10.71□□□□□ -0.69
COL9A1-205ENST00000447041 TYMSOSQ8TAI1 123 aa10.71□□□□□ -0.69
COL9A1-205ENST00000447041 HBDP02042 147 aa10.69□□□□□ -0.7
COL9A1-205ENST00000447041 LINC00614P0C842 121 aa10.69□□□□□ -0.7
COL9A1-205ENST00000447041 ERG28Q9UKR5 140 aa10.69□□□□□ -0.7
COL9A1-205ENST00000447041 TRAPPC1Q9Y5R8 145 aa10.69□□□□□ -0.7
COL9A1-205ENST00000447041 MUC2Q02817 5179 aa10.68□□□□□ -0.7
COL9A1-205ENST00000447041 VPREB1P12018 145 aa10.68□□□□□ -0.7
COL9A1-205ENST00000447041 KRTAP13-2Q52LG2 175 aa10.68□□□□□ -0.7
COL9A1-205ENST00000447041 ZNF625Q96I27 306 aaPredicted RBP10.68□□□□□ -0.7
COL9A1-205ENST00000447041 SND1-IT1Q9HBX3 110 aa10.68□□□□□ -0.7
COL9A1-205ENST00000447041 C11orf86A6NJI1 115 aa10.66□□□□□ -0.7
COL9A1-205ENST00000447041 PRLHP81277 87 aa10.66□□□□□ -0.7
COL9A1-205ENST00000447041 Q8NDZ9 215 aa10.66□□□□□ -0.7
COL9A1-205ENST00000447041 TMEM238C9JI98 176 aa10.65□□□□□ -0.7
COL9A1-205ENST00000447041 TMEM170BQ5T4T1 132 aa10.64□□□□□ -0.71
COL9A1-205ENST00000447041 FAM19A1Q7Z5A9 133 aa10.64□□□□□ -0.71
COL9A1-205ENST00000447041 BAGE3Q86Y29 109 aa10.64□□□□□ -0.71
COL9A1-205ENST00000447041 TMEM126AQ9H061 195 aa10.64□□□□□ -0.71
COL9A1-205ENST00000447041 COX17Q14061 63 aa10.63□□□□□ -0.71
COL9A1-205ENST00000447041 FAM229BQ4G0N7 80 aa10.62□□□□□ -0.71
COL9A1-205ENST00000447041 M0R378 163 aa10.61□□□□□ -0.71
COL9A1-205ENST00000447041 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
COL9A1-205ENST00000447041 APOC3P02656 99 aa10.6□□□□□ -0.71
COL9A1-205ENST00000447041 RETNLBQ9BQ08 111 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms