RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 UBE2BP63146 152 aa8.45□□□□□ -1.06
SMARCAL1-210ENST00000445153 FAM19A3Q7Z5A8 133 aa8.45□□□□□ -1.06
SMARCAL1-210ENST00000445153 TRBV30A0A0K0K1B3 111 aa8.44□□□□□ -1.06
SMARCAL1-210ENST00000445153 NDUFC2-KCTD14E9PQ53 114 aa8.44□□□□□ -1.06
SMARCAL1-210ENST00000445153 PRR4Q16378 134 aa8.44□□□□□ -1.06
SMARCAL1-210ENST00000445153 CDKN2A-AS1Q9UH64 79 aa8.44□□□□□ -1.06
SMARCAL1-210ENST00000445153 FABP9Q0Z7S8 132 aa8.43□□□□□ -1.06
SMARCAL1-210ENST00000445153 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
SMARCAL1-210ENST00000445153 LINC01561Q8N1V8 128 aa8.43□□□□□ -1.06
SMARCAL1-210ENST00000445153 MRPL18Q9H0U6 180 aaKnown RBP8.43□□□□□ -1.06
SMARCAL1-210ENST00000445153 VCX2Q9H322 139 aa8.43□□□□□ -1.06
SMARCAL1-210ENST00000445153 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
SMARCAL1-210ENST00000445153 K7EMI3 77 aa8.42□□□□□ -1.06
SMARCAL1-210ENST00000445153 G0S2P27469 103 aa8.42□□□□□ -1.06
SMARCAL1-210ENST00000445153 C2orf88Q9BSF0 95 aa8.42□□□□□ -1.06
SMARCAL1-210ENST00000445153 NXT2Q9NPJ8 142 aaKnown RBP8.42□□□□□ -1.06
SMARCAL1-210ENST00000445153 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
SMARCAL1-210ENST00000445153 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
SMARCAL1-210ENST00000445153 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
SMARCAL1-210ENST00000445153 TOMM6Q96B49 74 aa8.41□□□□□ -1.06
SMARCAL1-210ENST00000445153 ZNF861PO60384 105 aa8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 NPSP0C0P6 89 aa8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 Q6ZN92 141 aa8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 Q8IZM0 81 aa8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 PACRGQ96M98 296 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.06
SMARCAL1-210ENST00000445153 S100A1P23297 94 aa8.39□□□□□ -1.07
SMARCAL1-210ENST00000445153 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-210ENST00000445153 C22orf24Q9Y442 160 aa8.39□□□□□ -1.07
SMARCAL1-210ENST00000445153 SMIM1B2RUZ4 78 aa8.38□□□□□ -1.07
SMARCAL1-210ENST00000445153 TSPAN13O95857 204 aa8.38□□□□□ -1.07
SMARCAL1-210ENST00000445153 ALKBH7Q9BT30 221 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-210ENST00000445153 LINC01546A6NGU7 62 aa8.37□□□□□ -1.07
SMARCAL1-210ENST00000445153 LINC01549A6NIU2 74 aa8.37□□□□□ -1.07
SMARCAL1-210ENST00000445153 HERVK_113P63121 156 aa8.37□□□□□ -1.07
SMARCAL1-210ENST00000445153 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
SMARCAL1-210ENST00000445153 IGLV5-45A0A087WSX0 123 aa8.36□□□□□ -1.07
SMARCAL1-210ENST00000445153 A0A087X002 238 aa8.36□□□□□ -1.07
SMARCAL1-210ENST00000445153 RAB5BP61020 215 aa8.36□□□□□ -1.07
SMARCAL1-210ENST00000445153 CKS1BP61024 79 aa8.36□□□□□ -1.07
SMARCAL1-210ENST00000445153 C6orf226Q5I0X4 101 aa8.36□□□□□ -1.07
SMARCAL1-210ENST00000445153 ERASQ7Z444 233 aa8.36□□□□□ -1.07
SMARCAL1-210ENST00000445153 A0A096LNJ9 63 aa8.35□□□□□ -1.07
SMARCAL1-210ENST00000445153 PRSS2P07478 247 aa8.35□□□□□ -1.07
SMARCAL1-210ENST00000445153 URB1-AS1Q96HZ7 61 aa8.35□□□□□ -1.07
SMARCAL1-210ENST00000445153 SCGB3A1Q96QR1 104 aa8.35□□□□□ -1.07
SMARCAL1-210ENST00000445153 F8VRH5 84 aa8.34□□□□□ -1.07
SMARCAL1-210ENST00000445153 PAPPA-AS1Q5QFB9 102 aa8.34□□□□□ -1.07
SMARCAL1-210ENST00000445153 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
SMARCAL1-210ENST00000445153 GEMIN7Q9H840 131 aaKnown RBP8.34□□□□□ -1.07
SMARCAL1-210ENST00000445153 NUPR1O60356 82 aa8.33□□□□□ -1.08
SMARCAL1-210ENST00000445153 ATP6V1G1O75348 118 aa8.33□□□□□ -1.08
SMARCAL1-210ENST00000445153 CST9LQ9H4G1 147 aa8.33□□□□□ -1.08
SMARCAL1-210ENST00000445153 ANAPC11Q9NYG5 84 aa8.33□□□□□ -1.08
SMARCAL1-210ENST00000445153 TINCRA0A1B0GVN0 87 aa8.32□□□□□ -1.08
SMARCAL1-210ENST00000445153 SPINK8P0C7L1 97 aa8.32□□□□□ -1.08
SMARCAL1-210ENST00000445153 LBHQ53QV2 105 aaPredicted RBP8.32□□□□□ -1.08
SMARCAL1-210ENST00000445153 KRTAP9-2Q9BYQ4 174 aa8.32□□□□□ -1.08
SMARCAL1-210ENST00000445153 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
SMARCAL1-210ENST00000445153 SEC11AP67812 179 aa8.31□□□□□ -1.08
SMARCAL1-210ENST00000445153 MRPL55Q7Z7F7 128 aaKnown RBP8.31□□□□□ -1.08
SMARCAL1-210ENST00000445153 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
SMARCAL1-210ENST00000445153 RPL37AP8A6NKH3 93 aa8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 BCE1O60756 84 aa8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 PDZD11Q5EBL8 140 aa8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 LCE2AQ5TA79 106 aaPredicted RBP8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 C18orf32Q8TCD1 76 aa8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 LINC00167Q96N53 147 aa8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 TP73-AS1Q9UF72 201 aa8.3□□□□□ -1.08
SMARCAL1-210ENST00000445153 TRGC2P03986 189 aa8.29□□□□□ -1.08
SMARCAL1-210ENST00000445153 LINC00614P0C842 121 aa8.29□□□□□ -1.08
SMARCAL1-210ENST00000445153 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
SMARCAL1-210ENST00000445153 BAGE3Q86Y29 109 aa8.29□□□□□ -1.08
SMARCAL1-210ENST00000445153 COLCA2A8K830 154 aa8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 SCO1O75880 301 aa8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 CRYGAP11844 174 aa8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 CXCL5P42830 114 aa8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 RPL28P46779 137 aaKnown RBP8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 TYMSOSQ8TAI1 123 aa8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 CHCHD1Q96BP2 118 aaKnown RBP8.28□□□□□ -1.08
SMARCAL1-210ENST00000445153 GAGE10A6NGK3 116 aa8.27□□□□□ -1.09
SMARCAL1-210ENST00000445153 HBDP02042 147 aa8.27□□□□□ -1.09
SMARCAL1-210ENST00000445153 PMVKQ15126 192 aa8.27□□□□□ -1.09
SMARCAL1-210ENST00000445153 KRTAP13-1Q8IUC0 172 aa8.27□□□□□ -1.09
SMARCAL1-210ENST00000445153 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
SMARCAL1-210ENST00000445153 HSBP1O75506 76 aa8.26□□□□□ -1.09
SMARCAL1-210ENST00000445153 IGLC3P0DOY3 106 aa8.26□□□□□ -1.09
SMARCAL1-210ENST00000445153 PMCHL1Q16048 86 aa8.26□□□□□ -1.09
SMARCAL1-210ENST00000445153 Q8NDZ9 215 aa8.26□□□□□ -1.09
SMARCAL1-210ENST00000445153 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
SMARCAL1-210ENST00000445153 ZNF22P17026 224 aaPredicted RBP8.25□□□□□ -1.09
SMARCAL1-210ENST00000445153 IGLV5-37A0A075B6J1 123 aa8.24□□□□□ -1.09
SMARCAL1-210ENST00000445153 A0A0U1RQV1 116 aa8.24□□□□□ -1.09
SMARCAL1-210ENST00000445153 ATP5LO75964 103 aa8.24□□□□□ -1.09
SMARCAL1-210ENST00000445153 C11orf86A6NJI1 115 aa8.21□□□□□ -1.1
SMARCAL1-210ENST00000445153 PFN2P35080 140 aa8.21□□□□□ -1.1
SMARCAL1-210ENST00000445153 VPREB1P12018 145 aa8.2□□□□□ -1.1
SMARCAL1-210ENST00000445153 NDUFA6P56556 154 aa8.2□□□□□ -1.1
SMARCAL1-210ENST00000445153 SND1-IT1Q9HBX3 110 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms