RNA–Protein interactions for RNA: ENST00000442029.5

PTPRN-206, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-206ENST00000442029 HERVK_113P63121 156 aa8.87□□□□□ -0.99
PTPRN-206ENST00000442029 C6orf226Q5I0X4 101 aa8.87□□□□□ -0.99
PTPRN-206ENST00000442029 TIMM17AQ99595 171 aa8.87□□□□□ -0.99
PTPRN-206ENST00000442029 M0QXV9 152 aa8.86□□□□□ -0.99
PTPRN-206ENST00000442029 KRTAP10-8P60410 259 aa8.86□□□□□ -0.99
PTPRN-206ENST00000442029 TOMM6Q96B49 74 aa8.86□□□□□ -0.99
PTPRN-206ENST00000442029 ALKBH7Q9BT30 221 aaPredicted RBP8.86□□□□□ -0.99
PTPRN-206ENST00000442029 IGLV7-43P04211 117 aa8.85□□□□□ -0.99
PTPRN-206ENST00000442029 FAM19A3Q7Z5A8 133 aa8.85□□□□□ -0.99
PTPRN-206ENST00000442029 Q8IZM0 81 aa8.85□□□□□ -0.99
PTPRN-206ENST00000442029 DIRC1Q969H9 104 aa8.85□□□□□ -0.99
PTPRN-206ENST00000442029 SCGB3A1Q96QR1 104 aa8.85□□□□□ -0.99
PTPRN-206ENST00000442029 LINC01549A6NIU2 74 aa8.83□□□□□ -1
PTPRN-206ENST00000442029 ODF1Q14990 250 aa8.83□□□□□ -1
PTPRN-206ENST00000442029 COX19Q49B96 90 aa8.83□□□□□ -1
PTPRN-206ENST00000442029 ERASQ7Z444 233 aa8.83□□□□□ -1
PTPRN-206ENST00000442029 GNB1LQ9BYB4 327 aa8.83□□□□□ -1
PTPRN-206ENST00000442029 CDKN2A-AS1Q9UH64 79 aa8.83□□□□□ -1
PTPRN-206ENST00000442029 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
PTPRN-206ENST00000442029 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
PTPRN-206ENST00000442029 SMCO4Q9NRQ5 59 aa8.82□□□□□ -1
PTPRN-206ENST00000442029 CXCL5P42830 114 aa8.81□□□□□ -1
PTPRN-206ENST00000442029 KRTAP11-1Q8IUC1 163 aa8.81□□□□□ -1
PTPRN-206ENST00000442029 F8VRH5 84 aa8.8□□□□□ -1
PTPRN-206ENST00000442029 H0Y9J4 135 aa8.8□□□□□ -1
PTPRN-206ENST00000442029 FA2HQ7L5A8 372 aa8.8□□□□□ -1
PTPRN-206ENST00000442029 KRTAP7-1Q8IUC3 87 aa8.8□□□□□ -1
PTPRN-206ENST00000442029 FABP9Q0Z7S8 132 aa8.79□□□□□ -1
PTPRN-206ENST00000442029 MRPL18Q9H0U6 180 aaKnown RBP8.79□□□□□ -1
PTPRN-206ENST00000442029 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
PTPRN-206ENST00000442029 XAGE1AQ9HD64 81 aa8.78□□□□□ -1
PTPRN-206ENST00000442029 SMIM1B2RUZ4 78 aa8.77□□□□□ -1.01
PTPRN-206ENST00000442029 LBHQ53QV2 105 aaPredicted RBP8.77□□□□□ -1.01
PTPRN-206ENST00000442029 PDZD11Q5EBL8 140 aa8.77□□□□□ -1.01
PTPRN-206ENST00000442029 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
PTPRN-206ENST00000442029 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
PTPRN-206ENST00000442029 PMVKQ15126 192 aa8.76□□□□□ -1.01
PTPRN-206ENST00000442029 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
PTPRN-206ENST00000442029 CST9LQ9H4G1 147 aa8.76□□□□□ -1.01
PTPRN-206ENST00000442029 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
PTPRN-206ENST00000442029 H3BRM9 83 aa8.75□□□□□ -1.01
PTPRN-206ENST00000442029 NUPR1O60356 82 aa8.75□□□□□ -1.01
PTPRN-206ENST00000442029 CBLN2Q8IUK8 224 aa8.75□□□□□ -1.01
PTPRN-206ENST00000442029 LRP2P98164 4655 aa8.75□□□□□ -1.01
PTPRN-206ENST00000442029 IGLV1-50A0A075B6I6 118 aa8.74□□□□□ -1.01
PTPRN-206ENST00000442029 IGLV5-45A0A087WSX0 123 aa8.74□□□□□ -1.01
PTPRN-206ENST00000442029 SPINK8P0C7L1 97 aa8.74□□□□□ -1.01
PTPRN-206ENST00000442029 S100A1P23297 94 aa8.74□□□□□ -1.01
PTPRN-206ENST00000442029 YPEL4Q96NS1 127 aa8.74□□□□□ -1.01
PTPRN-206ENST00000442029 NDUFA6P56556 154 aa8.73□□□□□ -1.01
PTPRN-206ENST00000442029 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
PTPRN-206ENST00000442029 ATP6V1G1O75348 118 aa8.72□□□□□ -1.01
PTPRN-206ENST00000442029 TP73-AS1Q9UF72 201 aa8.72□□□□□ -1.01
PTPRN-206ENST00000442029 TRAPPC1Q9Y5R8 145 aa8.72□□□□□ -1.01
PTPRN-206ENST00000442029 ZNF861PO60384 105 aa8.71□□□□□ -1.02
PTPRN-206ENST00000442029 ATP5LO75964 103 aa8.71□□□□□ -1.02
PTPRN-206ENST00000442029 RAB5BP61020 215 aa8.71□□□□□ -1.02
PTPRN-206ENST00000442029 RPL13AP40429 203 aaKnown RBP8.7□□□□□ -1.02
PTPRN-206ENST00000442029 HBDP02042 147 aa8.69□□□□□ -1.02
PTPRN-206ENST00000442029 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
PTPRN-206ENST00000442029 LINC00614P0C842 121 aa8.69□□□□□ -1.02
PTPRN-206ENST00000442029 NKAPP1Q8N9T2 125 aa8.69□□□□□ -1.02
PTPRN-206ENST00000442029 IGLC3P0DOY3 106 aa8.68□□□□□ -1.02
PTPRN-206ENST00000442029 RPL28P46779 137 aaKnown RBP8.68□□□□□ -1.02
PTPRN-206ENST00000442029 C18orf32Q8TCD1 76 aa8.68□□□□□ -1.02
PTPRN-206ENST00000442029 RPL37AP8A6NKH3 93 aa8.67□□□□□ -1.02
PTPRN-206ENST00000442029 BCE1O60756 84 aa8.67□□□□□ -1.02
PTPRN-206ENST00000442029 SCO1O75880 301 aa8.67□□□□□ -1.02
PTPRN-206ENST00000442029 LINC00167Q96N53 147 aa8.67□□□□□ -1.02
PTPRN-206ENST00000442029 GAGE10A6NGK3 116 aa8.66□□□□□ -1.02
PTPRN-206ENST00000442029 COLCA2A8K830 154 aa8.66□□□□□ -1.02
PTPRN-206ENST00000442029 PFN2P35080 140 aa8.66□□□□□ -1.02
PTPRN-206ENST00000442029 PMCHL1Q16048 86 aa8.66□□□□□ -1.02
PTPRN-206ENST00000442029 A0A096LNJ9 63 aa8.65□□□□□ -1.02
PTPRN-206ENST00000442029 ZNF22P17026 224 aaPredicted RBP8.65□□□□□ -1.02
PTPRN-206ENST00000442029 URB1-AS1Q96HZ7 61 aa8.65□□□□□ -1.02
PTPRN-206ENST00000442029 IGLV5-37A0A075B6J1 123 aa8.64□□□□□ -1.03
PTPRN-206ENST00000442029 BAGE3Q86Y29 109 aa8.64□□□□□ -1.03
PTPRN-206ENST00000442029 IGLV5-39A0A0G2JS06 123 aa8.63□□□□□ -1.03
PTPRN-206ENST00000442029 UBE2AP49459 152 aa8.63□□□□□ -1.03
PTPRN-206ENST00000442029 TMEM170BQ5T4T1 132 aa8.63□□□□□ -1.03
PTPRN-206ENST00000442029 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
PTPRN-206ENST00000442029 TRGC2P03986 189 aa8.62□□□□□ -1.03
PTPRN-206ENST00000442029 SFTA2Q6UW10 78 aa8.62□□□□□ -1.03
PTPRN-206ENST00000442029 IGKV2-28A0A075B6P5 120 aa8.61□□□□□ -1.03
PTPRN-206ENST00000442029 C11orf86A6NJI1 115 aa8.61□□□□□ -1.03
PTPRN-206ENST00000442029 IGKV2D-28P01615 120 aa8.61□□□□□ -1.03
PTPRN-206ENST00000442029 COX17Q14061 63 aa8.61□□□□□ -1.03
PTPRN-206ENST00000442029 ZNF625Q96I27 306 aaPredicted RBP8.61□□□□□ -1.03
PTPRN-206ENST00000442029 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
PTPRN-206ENST00000442029 CHTOPQ9Y3Y2 248 aaKnown RBP8.6□□□□□ -1.03
PTPRN-206ENST00000442029 RNF213Q63HN8 5207 aa8.59□□□□□ -1.03
PTPRN-206ENST00000442029 CRYGAP11844 174 aa8.59□□□□□ -1.03
PTPRN-206ENST00000442029 PRR4Q16378 134 aa8.59□□□□□ -1.03
PTPRN-206ENST00000442029 SND1-IT1Q9HBX3 110 aa8.59□□□□□ -1.03
PTPRN-206ENST00000442029 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
PTPRN-206ENST00000442029 CHCHD1Q96BP2 118 aaKnown RBP8.58□□□□□ -1.04
PTPRN-206ENST00000442029 LPAP08519 4548 aa8.58□□□□□ -1.04
PTPRN-206ENST00000442029 A0A087X002 238 aa8.56□□□□□ -1.04
PTPRN-206ENST00000442029 VPREB1P12018 145 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms